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planemo upload for repository https://github.com/scottx611x/split-paired-collection commit 163187a32873a873de175fb50b5fbe595b456ffd
author scottx611x
date Wed, 11 Oct 2017 13:33:01 -0400
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1 <?xml version='1.0' encoding='utf-8'?>
2
3 <tool id="split_paired_collection" name="Split Paired Collection" version="0.1">
4 <description>To split the elements of a Paired Dataset Collection into two distinct outputs</description>
5 <command>
6 mv $input_collection.forward $forward_element;
7 mv $input_collection.reverse $reverse_element;
8 </command>
9 <inputs>
10 <param name="input_collection" type="data_collection" collection_type="paired" label="Input Paired Collection"/>
11 </inputs>
12 <outputs>
13 <data name="forward_element" />
14 <data name="reverse_element" />
15 </outputs>
16 <tests>
17 <test>
18 <param name="input_collection">
19 <collection type="paired">
20 <element name="forward" value="forward.txt" />
21 <element name="reverse" value="reverse.txt" />
22 </collection>
23 </param>
24 <output name="forward_element">
25 <assert_contents>
26 <has_line line="Forward Element" />
27 </assert_contents>
28 </output>
29 <output name="reverse_element">
30 <assert_contents>
31 <has_line line="Reverse Element" />
32 </assert_contents>
33 </output>
34 </test>
35 </tests>
36 <help>
37 .. class:: infomark
38
39 **Purpose**
40
41 To split the elements of a Paired Dataset Collection into two distinct outputs
42
43 -----
44
45 .. class:: infomark
46
47 **Inputs and outputs**
48
49 Input: Paired Dataset Collection
50 Outputs: two files corresponding to the two elements of said collection
51 </help>
52 </tool>
53