Mercurial > repos > shellac > guppy_basecaller

comparison env/lib/python3.7/site-packages/cwltool/tests/wf/echo.cwl @ 2:6af9afd405e9 draft

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"planemo upload commit 0a63dd5f4d38a1f6944587f52a8cd79874177fc1"
author shellac
date Thu, 14 May 2020 14:56:58 -0400
parents 26e78fe6e8c4
children
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1:75ca89e9b81c 2:6af9afd405e9
1 #!/usr/bin/env cwl-runner
2 class: CommandLineTool
3 cwlVersion: v1.0
4 inputs:
5 r: string
6 script:
7 type: string
8 default: |
9 from __future__ import print_function
10 import sys
11 print(sys.argv[1])
12 if sys.argv[1] == "2":
13 exit(1)
14 else:
15 f = open("foo"+sys.argv[1]+".txt", "wb")
16 content = sys.argv[1]+"\n"
17 f.write(content.encode('utf-8'))
18 if sys.argv[1] == "5":
19 exit(1)
20 outputs:
21 out:
22 type: File
23 outputBinding:
24 glob: foo$(inputs.r).txt
25 arguments: [python, -c, $(inputs.script), $(inputs.r)]