view env/lib/python3.7/site-packages/cwltool/tests/wf/echo.cwl @ 2:6af9afd405e9 draft

"planemo upload commit 0a63dd5f4d38a1f6944587f52a8cd79874177fc1"
author shellac
date Thu, 14 May 2020 14:56:58 -0400
parents 26e78fe6e8c4
children
line wrap: on
line source

#!/usr/bin/env cwl-runner
class: CommandLineTool
cwlVersion: v1.0
inputs:
  r: string
  script:
    type: string
    default: |
      from __future__ import print_function
      import sys
      print(sys.argv[1])
      if sys.argv[1] == "2":
        exit(1)
      else:
        f = open("foo"+sys.argv[1]+".txt", "wb")
        content = sys.argv[1]+"\n"
        f.write(content.encode('utf-8'))
      if sys.argv[1] == "5":
        exit(1)
outputs:
  out:
    type: File
    outputBinding:
      glob: foo$(inputs.r).txt
arguments: [python, -c, $(inputs.script), $(inputs.r)]