Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/cwltool/tests/wf/sec-wf-out.cwl @ 2:6af9afd405e9 draft
"planemo upload commit 0a63dd5f4d38a1f6944587f52a8cd79874177fc1"
author | shellac |
---|---|
date | Thu, 14 May 2020 14:56:58 -0400 |
parents | 26e78fe6e8c4 |
children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.7/site-packages/cwltool/tests/wf/sec-wf-out.cwl Thu May 14 14:56:58 2020 -0400 @@ -0,0 +1,45 @@ +#!/usr/bin/env cwl-runner +class: Workflow +cwlVersion: v1.0 +inputs: [] +outputs: + file1: + type: File + outputSource: step1/file1 + + +steps: + step1: + in: [] + out: + - file1 + - file1csv + run: + class: CommandLineTool + requirements: + - class: ShellCommandRequirement + arguments: + - shellQuote: false + valueFrom: > + echo "abc" > f.txt; + echo "3" > f.txt.size; + echo "a" > f.txt.firstletter; + echo "a,b,c" > f.csv; + echo "1,2,3" > f.csv.columns; + echo "ignored" > f.txt.ignoreme; + inputs: [] + outputs: + file1: + type: File + outputBinding: + glob: "f.txt" + secondaryFiles: + - ".size" + - ".firstletter" + - "^.csv" + file1csv: + type: File + outputBinding: + glob: "f.csv" + secondaryFiles: + - ".columns"