Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/gxformat2-0.11.1.dist-info/METADATA @ 5:9b1c78e6ba9c draft default tip
"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"
author | shellac |
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date | Mon, 01 Jun 2020 08:59:25 -0400 |
parents | 79f47841a781 |
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--- a/env/lib/python3.7/site-packages/gxformat2-0.11.1.dist-info/METADATA Thu May 14 16:47:39 2020 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,219 +0,0 @@ -Metadata-Version: 2.1 -Name: gxformat2 -Version: 0.11.1 -Summary: Galaxy Workflow Format 2 Descriptions -Home-page: https://github.com/galaxyproject/gxformat2 -Author: Galaxy Project and Community -Author-email: jmchilton@gmail.com -License: AFL -Keywords: galaxy -Platform: UNKNOWN -Classifier: Development Status :: 5 - Production/Stable -Classifier: Intended Audience :: Developers -Classifier: Environment :: Console -Classifier: License :: OSI Approved :: Academic Free License (AFL) -Classifier: Operating System :: POSIX -Classifier: Topic :: Software Development -Classifier: Topic :: Software Development :: Code Generators -Classifier: Topic :: Software Development :: Testing -Classifier: Natural Language :: English -Classifier: Programming Language :: Python :: 2 -Classifier: Programming Language :: Python :: 2.7 -Classifier: Programming Language :: Python :: 3 -Requires-Dist: six (>=1.9.0) -Requires-Dist: bioblend -Requires-Dist: pyyaml - - -.. image:: https://readthedocs.org/projects/pip/badge/?version=latest - :target: https://gxformat2.readthedocs.org - -.. image:: https://badge.fury.io/py/gxformat2.svg - :target: https://pypi.python.org/pypi/gxformat2/ - -.. image:: https://travis-ci.org/jmchilton/gxformat2.png?branch=master - :target: https://travis-ci.org/jmchilton/gxformat2 - -.. image:: https://coveralls.io/repos/jmchilton/gxformat2/badge.svg?branch=master - :target: https://coveralls.io/r/jmchilton/gxformat2?branch=master - - -This package defines a high-level Galaxy_ workflow description termed "Format -2". At this point, these workflows are defined entirely client side and -transcoded into traditional (or Format 1?) Galaxy workflows. - -The traditional Galaxy workflow description is not meant to be concise and is -neither readily human readable or human writable. Format 2 addresses all three -of these limitations. - -Format 2 workflow is a highly experimental format and will change rapidly in -potentially backward incompatible ways until the code is merged into the -Galaxy server and enabled by default. - -* Free software: Academic Free License version 3.0 -* Documentation: https://galaxy-lib.readthedocs.org. -* Code: https://github.com/galaxyproject/galaxy-lib - - -.. _Galaxy: http://galaxyproject.org/ -.. _GitHub: https://github.com/ -.. _Travis CI: http://travis-ci.org/ - - - - -History -------- - -.. to_doc - ---------------------- -0.11.1 (2020-02-25) ---------------------- - -* Bug fix for gxwf-lint invocation from setup.py installed script. - ---------------------- -0.11.0 (2020-02-25) ---------------------- - -* Validate Galaxy Markdown in workflow reports as part of linting. -* Improved null handling in native ga workflow linting. -* Enhancements to workflow linting from Python. Lint for lack of documentation, - tools using the test toolshed, and implement special linting for training - material workflows to ensure a tag matches the workflow topic. -* Add gxwf-viz script that produces a cytoscape visualization of a workflow. - ---------------------- -0.10.1 (2019-12-07) ---------------------- - -* Bug fix to handle outputs without labels in Format 2 - they - don't validate per se but they are important for testing in the - Galaxy framework. - ---------------------- -0.10.0 (2019-12-06) ---------------------- - -* Implement scheam, validation, linting (for Format 2 and .ga). -* Handle new reports field in Galaxy 19.09 workflows. -* Numerous fixes for conversiion to and from native workflows. -* Numerous new test cases. -* Implement Java project for valiating and linting both kinds of workflows. - ---------------------- -0.9.0 (2019-07-08) ---------------------- - -* Implement default values in gxformat2. - ---------------------- -0.8.4 (2019-06-24) ---------------------- - -* Fix output IDs of 0. - ---------------------- -0.8.3 (2019-05-23) ---------------------- - -* Implement set_columns PJA. - ---------------------- -0.8.2 (2019-03-16) ---------------------- - -* Allow another API return option for experimental tool creation API. - ---------------------- -0.8.1 (2019-03-11) ---------------------- - -* Implement change datatype PJA. - ---------------------- -0.8.0 (2018-11-01) ---------------------- - -* Implement experimental CWL-style step defaults (see Galaxy PR #6850). - ---------------------- -0.7.1 (2018-10-09) ---------------------- - -* Various small fixes for changes in 0.7.1. - ---------------------- -0.7.0 (2018-10-08) ---------------------- - -* Add some basic test cases. -* Allow ID-map style listing of steps. -* Ordered load (in addition to existing dump functionality) or ordering of steps in ID-map style variant works. -* Allow CWL-style $graph defs that can define multiple workflows in a single file. -* Initial work on de-duplicating subworkflow definitions on import. -* Fix position handling while exporting workflow. - ---------------------- -0.6.1 (2018-10-01) ---------------------- - -* Fix export of non-data parameters and implicit workflow connections. - ---------------------- -0.6.0 (2018-10-01) ---------------------- - -* Various fixes, allow id map style workflow input definitions. - ---------------------- -0.5.0 (2018-10-01) ---------------------- - -* More fixes for PJA, add the ``doc`` keyword to format 2 workflows to match CWL workflows. Map to and from native Galaxy workflows as annotations. - ---------------------- -0.4.0 (2018-10-01) ---------------------- - -* Fixes for exporting PJA when exporting workflows from native .ga to format 2. - ---------------------- -0.3.2 (2018-10-01) ---------------------- - -* Fixes for exporting workflow outputs from native .ga to format 2, support for modern map style output definitions like CWL 1.0. - ---------------------- -0.3.1 (2018-10-01) ---------------------- - -* Fixes for exporting subworkflows from native .ga to format 2. - ---------------------- -0.3.0 (2018-09-30) ---------------------- - -* More cwl style inputs, initial work on conversion from native workflows, various small fixes and tweaks. - ---------------------- -0.2.0 (2018-02-21) ---------------------- - -* Bring in latest Galaxy updates - Python 3 fixes, safe YAML usage, and more PJA implemented. - ---------------------- -0.1.1 (2016-08-15) ---------------------- - -* Fix one Python 3 incompatibility. - ---------------------- -0.1.0 (2016-05-02) ---------------------- - -* Initial version - code from Galaxy's test framework with changes - based on planemo testing. - -