Mercurial > repos > shellac > guppy_basecaller
view env/lib/python3.7/site-packages/cwltool/tests/secondary-files.cwl @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author | shellac |
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date | Sat, 02 May 2020 07:14:21 -0400 |
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#!/usr/bin/env cwl-runner cwlVersion: v1.1.0-dev1 requirements: - class: InlineJavascriptRequirement - class: ShellCommandRequirement class: CommandLineTool inputs: fasta_path: type: File secondaryFiles: - pattern: ^.fastq required: true - pattern: .crai required: false - .bai? - pattern: "${ return null }" outputs: bai_list: type: File outputBinding: glob: lsout secondaryFiles: - .bai? - pattern: "${ return null }" - pattern: .crai required: false - pattern: .idx baseCommand: ["ls"] stdout: lsout