Mercurial > repos > sigven > oncoenrichr

changeset 9:e69867fb65fe draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author sigven
date Tue, 06 Aug 2024 07:04:25 +0000
parents dc08c98bb28f
children e88c353e1d66
files oncoenrichr_wrapper.xml
diffstat 1 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/oncoenrichr_wrapper.xml	Fri Aug 02 18:36:59 2024 +0000
+++ b/oncoenrichr_wrapper.xml	Tue Aug 06 07:04:25 2024 +0000
@@ -1,8 +1,11 @@
-<tool id="oncoenrichr_wrapper" name="oncoEnrichR" version="1.5.0">
+<tool id="oncoenrichr_wrapper" name="oncoEnrichR" version="1.5.1">
   <description>Cancer-dedicated gene set interpretation</description>
     <requirements>
-        <container type="docker">sigven/oncoenrichr:1.5.0</container>
+        <container type="docker">sigven/oncoenrichr:1.5.1</container>
   </requirements>
+  <environment_variables>
+      <environment_variable name="XDG_CACHE_HOME">\$_GALAXY_JOB_TMP_DIR</environment_variable>
+  </environment_variables>
   <command detect_errors="aggressive"><![CDATA[
       #if $query_set.query_choice.query_input == "text"
         echo $query_set.query_choice.query_text | sed 's/__cn__/\n/g' > query_text.csv &&