annotate pyPRADA_1.2/tools/samtools-0.1.16/sample.h @ 0:acc2ca1a3ba4

Uploaded
author siyuan
date Thu, 20 Feb 2014 00:44:58 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
1 #ifndef BAM_SAMPLE_H
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
2 #define BAM_SAMPLE_H
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
3
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
4 #include "kstring.h"
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
5
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
6 typedef struct {
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
7 int n, m;
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
8 char **smpl;
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
9 void *rg2smid, *sm2id;
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
10 } bam_sample_t;
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
11
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
12 bam_sample_t *bam_smpl_init(void);
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
13 int bam_smpl_add(bam_sample_t *sm, const char *abs, const char *txt);
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
14 int bam_smpl_rg2smid(const bam_sample_t *sm, const char *fn, const char *rg, kstring_t *str);
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
15 void bam_smpl_destroy(bam_sample_t *sm);
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
16
acc2ca1a3ba4 Uploaded
siyuan
parents:
diff changeset
17 #endif