--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/pyPRADA_1.2/tools/bwa-0.5.7-mh/main.h	Thu Feb 20 00:44:58 2014 -0500
@@ -0,0 +1,29 @@
+#ifndef BWA_MAIN_H
+#define BWA_MAIN_H
+
+#ifdef __cplusplus
+extern "C" {
+#endif
+
+	int bwa_fa2pac(int argc, char *argv[]);
+	int bwa_pac_rev(int argc, char *argv[]);
+	int bwa_pac2cspac(int argc, char *argv[]);
+	int bwa_pac2bwt(int argc, char *argv[]);
+	int bwa_bwtupdate(int argc, char *argv[]);
+	int bwa_bwt2sa(int argc, char *argv[]);
+	int bwa_index(int argc, char *argv[]);
+	int bwa_aln(int argc, char *argv[]);
+	int bwt_bwtgen_main(int argc, char *argv[]);
+
+	int bwa_sai2sam_se(int argc, char *argv[]);
+	int bwa_sai2sam_pe(int argc, char *argv[]);
+
+	int bwa_stdsw(int argc, char *argv[]);
+
+	int bwa_bwtsw2(int argc, char *argv[]);
+
+#ifdef __cplusplus
+}
+#endif
+
+#endif