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380 "action_type": "HideDatasetAction",
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381 "output_name": "output_control_lambda"
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382 },
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383 "HideDatasetActionoutput_extra_files": {
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384 "action_arguments": {},
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385 "action_type": "HideDatasetAction",
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386 "output_name": "output_extra_files"
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387 },
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388 "HideDatasetActionoutput_gappedpeaks": {
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389 "action_arguments": {},
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390 "action_type": "HideDatasetAction",
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391 "output_name": "output_gappedpeaks"
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392 },
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393 "HideDatasetActionoutput_plot": {
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394 "action_arguments": {},
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395 "action_type": "HideDatasetAction",
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396 "output_name": "output_plot"
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397 },
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398 "HideDatasetActionoutput_treat_pileup": {
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399 "action_arguments": {},
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400 "action_type": "HideDatasetAction",
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401 "output_name": "output_treat_pileup"
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402 }
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403 },
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404 "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/macs2/macs2_callpeak/2.1.0.20151222.0",
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405 "tool_shed_repository": {
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406 "changeset_revision": "56e104999978",
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407 "name": "macs2",
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408 "owner": "iuc",
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409 "tool_shed": "toolshed.g2.bx.psu.edu"
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410 },
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411 "tool_state": "{\"__page__\": null, \"effective_genome_size_options\": \"{\\\"gsize\\\": \\\"1400000000\\\", \\\"effective_genome_size_options_selector\\\": \\\"user_defined\\\", \\\"__current_case__\\\": 4}\", \"bampe\": \"\\\"true\\\"\", \"input_control_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"band_width\": \"\\\"300\\\"\", \"cutoff_options\": \"{\\\"cutoff_options_selector\\\": \\\"qvalue\\\", \\\"qvalue\\\": \\\"0.05\\\", \\\"__current_case__\\\": 1}\", \"advanced_options\": \"{\\\"advanced_options_selector\\\": \\\"on\\\", \\\"ratio\\\": \\\"1.0\\\", \\\"to_large\\\": \\\"false\\\", \\\"slocal\\\": \\\"1000\\\", \\\"broad_options\\\": {\\\"broad_options_selector\\\": \\\"nobroad\\\", \\\"call_summits\\\": \\\"false\\\", \\\"__current_case__\\\": 1}, \\\"nolambda\\\": \\\"false\\\", \\\"llocal\\\": \\\"10000\\\", \\\"keep_dup_options\\\": {\\\"__current_case__\\\": 2, \\\"keep_dup_options_selector\\\": \\\"all\\\"}, \\\"__current_case__\\\": 0}\", \"input_treatment_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"nomodel_type\": \"{\\\"nomodel_type_selector\\\": \\\"create_model\\\", \\\"__current_case__\\\": 0}\", \"outputs\": \"[\\\"peaks_tabular\\\", \\\"summits\\\", \\\"bdg\\\"]\"}",
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412 "tool_version": "2.1.0.20151222.0",
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413 "type": "tool",
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414 "uuid": "f58a8811-f8e3-4e91-a8b9-4c635e7d00c5",
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415 "workflow_outputs": [
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416 {
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417 "label": null,
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418 "output_name": "output_tabular",
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419 "uuid": "29b6c2d4-6f1a-48d2-82a3-b0d45c186bda"
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420 },
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421 {
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422 "label": null,
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423 "output_name": "output_summits",
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424 "uuid": "26d6760f-5f82-4d24-a4fa-0294c37290ef"
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425 },
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426 {
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427 "label": null,
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428 "output_name": "output_narrowpeaks",
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429 "uuid": "b6445346-e10b-4deb-a7e8-b8df81c73796"
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430 }
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431 ]
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432 }
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433 },
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434 "uuid": "0497d800-74b0-4a7a-8915-215a6b142d08"
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435 } |
