diff test-data/test.vcf @ 1:85bdf226b67b default tip

add vcf2genotypes and test-data
author superyuan <shuaiyuan.emory@gmail.com>
date Mon, 30 Jun 2014 10:49:54 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test.vcf	Mon Jun 30 10:49:54 2014 -0400
@@ -0,0 +1,8 @@
+##fileformat=VCFv4.0
+##fileDate=20110201
+##reference=NCBI37
+##source=Affymetrix_Axiom_DB
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA18501	NA18502	NA18504	NA18505	NA18507	NA18508	NA18516	NA18517	NA18522	NA18523	NA18852	NA18853	NA18855	NA18856	NA18858	NA18859	NA18861	NA18862	NA18870	NA18871	NA18912	NA18913	NA19092	NA19093	NA19098	NA19099	NA19101	NA19102	NA19116	NA19119	NA19127	NA19128	NA19130	NA19131	NA19137	NA19138	NA19140	NA19141	NA19143	NA19144	NA19152	NA19153	NA19159	NA19160	NA19171	NA19172	NA19192	NA19193	NA19200	NA19201	NA19203	NA19204	NA19206	NA19207	NA19209	NA19210	NA19222	NA19223	NA19238	NA19239
+1	305	rs5	C	T	.	PASS	.	GT	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/0	0/1	0/1	0/0
+1	334	.	A	C	.	PASS	.	GT	0/0	0/0	./.	0/0	./.	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	./.	0/0	0/0	./.	0/0	./.	./.	./.	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	0/0	0/0	./.	0/0	./.	./.	0/0	./.	0/0	./.	0/0	0/0	0/0	./.	./.	0/0	0/0	0/0	./.	0/0	0/0	0/1	0/0