Mercurial > repos > tduigou > rpextractsink
changeset 2:8d16a0f08d0a draft
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
| author | tduigou |
|---|---|
| date | Tue, 11 Jan 2022 10:26:50 +0000 |
| parents | ceab7bc46740 |
| children | 47bb93e7832b |
| files | rpextractsink.xml test-data/E.coli.sbml test-data/iCN718.xml.gz test-data/sink.csv |
| diffstat | 4 files changed, 328 insertions(+), 133609 deletions(-) [+] |
line wrap: on
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--- a/rpextractsink.xml Mon Jan 03 15:34:21 2022 +0000 +++ b/rpextractsink.xml Tue Jan 11 10:26:50 2022 +0000 @@ -1,4 +1,4 @@ -<tool id="rpExtractSink" name="Sink from SBML" version="5.11.1"> +<tool id="rpextractsink" name="Sink from SBML" version="5.11.1" profile="19.09"> <description>Generate the RetroPath2.0 sink file from an SBML input</description> <requirements> <requirement type="package" version="5.11.1">rptools</requirement> @@ -7,14 +7,8 @@ <regex match="Could not retreive any species in the compartment" level="fatal" /> </stdio> <command detect_errors="exit_code"><![CDATA[ - #if str($input_strain_type.strain_type) == "BiGG": - curl http://bigg.ucsd.edu/static/models/$(input_strain_type.input).xml.gz --output $(input_strain_type.input).xml.gz; - python -m rptools.rpextractsink - $(input_strain_type.input).xml.gz - #else - python -m rptools.rpextractsink - $(input_strain_type.input) - #end if + python -m rptools.rpextractsink + '$input' '$sink' --compartment_id '$adv.compartment_id' #if str($adv.remove_dead_end) == "true": @@ -22,83 +16,19 @@ #end if ]]></command> <inputs> - <conditional name="input_strain_type"> - <param name="strain_type" type="select" label="Input type"> - <option value="BiGG" selected="true">BiGG database</option> - <option value="user">Custom file</option> - </param> - <when value="user"> - <param name="input" type="data" format="sbml" optional="false" label="Strain" /> - </when> - <when value="BiGG"> - <param name="input" type="select" label="Strain"> - <option value="iCN718">(iCN718) Acinetobacter baumannii AYE</option> - <option value="iYO844">(iYO844) Bacillus subtilis subsp. subtilis str. 168</option> - <option value="iRC1080">(iRC1080) Chlamydomonas reinhardtii</option> - <option value="iCN900">(iCN900) Clostridioides difficile 630</option> - <option value="iHN637">(iHN637) Clostridium ljungdahlii DSM 13528</option> - <option value="iCHOv1_DG44">(iCHOv1_DG44) Cricetulus griseus</option> - <option value="iCHOv1">(iCHOv1) Cricetulus griseus</option> - <option value="iAF1260b">(iAF1260b) Escherichia coli str. K-12 substr. MG1655</option> - <option value="iAF1260">(iAF1260) Escherichia coli str. K-12 substr. MG1655</option> - <option value="iML1515" selected="true">(iML1515) Escherichia coli str. K-12 substr. MG1655</option> - <option value="iJO1366">(iJO1366) Escherichia coli str. K-12 substr. MG1655</option> - <option value="iJR904">(iJR904) Escherichia coli str. K-12 substr. MG1655</option> - <option value="e_coli_core">(e_coli_core) Escherichia coli str. K-12 substr. MG1655</option> - <option value="iAF987">(iAF987) Geobacter metallireducens GS-15</option> - <option value="iIT341">(iIT341) Helicobacter pylori 26695</option> - <option value="iAT_PLT_636">(iAT_PLT_636) Homo sapiens</option> - <option value="Recon3D">(Recon3D) Homo sapiens</option> - <option value="iAB_RBC_283">(iAB_RBC_283) Homo sapiens</option> - <option value="RECON1">(RECON1) Homo sapiens</option> - <option value="iYL1228">(iYL1228) Klebsiella pneumoniae subsp. pneumoniae MGH 78578</option> - <option value="iNF517">(iNF517) Lactococcus lactis subsp. cremoris MG1363</option> - <option value="iAF692">(iAF692) Methanosarcina barkeri str. Fusaro</option> - <option value="iMM1415">(iMM1415) Mus musculus</option> - <option value="iNJ661">(iNJ661) Mycobacterium tuberculosis H37Rv</option> - <option value="iEK1008">(iEK1008) Mycobacterium tuberculosis H37Rv</option> - <option value="iLB1027_lipid">(iLB1027_lipid) Phaeodactylum tricornutum CCAP 1055/1</option> - <option value="iAM_Pb448">(iAM_Pb448) Plasmodium berghei</option> - <option value="iAM_Pc455">(iAM_Pc455) Plasmodium cynomolgi strain B</option> - <option value="iAM_Pf480">(iAM_Pf480) Plasmodium falciparum 3D7</option> - <option value="iAM_Pk459">(iAM_Pk459) Plasmodium knowlesi strain H</option> - <option value="iAM_Pv461">(iAM_Pv461) Plasmodium vivax Sal-1</option> - <option value="iJN746">(iJN746) Pseudomonas putida KT2440</option> - <option value="iJN1463">(iJN1463) Pseudomonas putida KT2440</option> - <option value="iND750">(iND750) Saccharomyces cerevisiae S288C</option> - <option value="iMM904">(iMM904) Saccharomyces cerevisiae S288C</option> - <option value="STM_v1_0">(STM_v1_0) Salmonella enterica subsp. enterica serovar Typhimurium str. LT2</option> - <option value="iYS1720">(iYS1720) Salmonella pan-reactome</option> - <option value="iSB619">(iSB619) Staphylococcus aureus subsp. aureus N315</option> - <option value="iYS854">(iYS854) Staphylococcus aureus subsp. aureus USA300_TCH1516</option> - <option value="iJB785">(iJB785) Synechococcus elongatus PCC 7942</option> - <option value="iJN678">(iJN678) Synechocystis sp. PCC 6803</option> - <option value="iSynCJ816">(iSynCJ816) Synechocystis sp. PCC 6803</option> - <option value="iLJ478">(iLJ478) Thermotoga maritima MSB8</option> - <option value="iIS312">(iIS312) Trypanosoma cruzi Dm28c</option> - <option value="iIS312_Trypomastigote">(iIS312_Trypomastigote) Trypanosoma cruzi Dm28c</option> - <option value="iIS312_Epimastigote">(iIS312_Epimastigote) Trypanosoma cruzi Dm28c</option> - <option value="iIS312_Amastigote">(iIS312_Amastigote) Trypanosoma cruzi Dm28c</option> - </param> - </when> - </conditional> - <!-- <param name="input" type="data" format="sbml" optional="false" label="SBML model" /> --> + <param name="input" type="data" format="xml" optional="false" label="Strain" /> <section name="adv" title="Advanced Options" expanded="false"> <param name="compartment_id" type="text" value="c" label="SBML compartment ID" /> <param name="remove_dead_end" type="boolean" checked="true" label="Remove dead-end metabolites using FVA evaluation?" /> </section> </inputs> <outputs> - <data name="sink" format="csv" label="${tool.name} - ${input_strain_type.input}" /> + <data name="sink" format="csv" label="${tool.name} - ${input.name}" /> </outputs> <tests> <test> - <!-- test 1: check if identical outputs are produced with default parameters --> - <conditional name="input_strain_type"> - <param name="strain_type" value="user"/> - <param name="input" value="E.coli.sbml" /> - </conditional> - <param name="compartment_id" value="MNXC3"/> + <!-- test 1: check if identical outputs are produced with iCN718 model input --> + <param name="input" value="iCN718.xml.gz" /> <output name="sink" file="sink.csv" ftype="csv" compare="diff"/> </test> </tests> @@ -131,7 +61,6 @@ * **output_sink**\ : (string) Path to the output csv file - Project Links --------------------- @@ -140,13 +69,11 @@ Version ---------- -5.9.2 - +5.11.1 Authors ------- - * **Melchior du Lac** * Joan Hérisson @@ -158,58 +85,13 @@ Acknowledgments --------------- - * Thomas Duigou - - ]]></help> <citations> - <citation type="bibtex"> -@article{le2005minimum, - title={Minimum information requested in the annotation of biochemical models (MIRIAM)}, - author={Le Nov{\`e}re, Nicolas and Finney, Andrew and Hucka, Michael and Bhalla, Upinder S and Campagne, Fabien and Collado-Vides, Julio and Crampin, Edmund J and Halstead, Matt and Klipp, Edda and Mendes, Pedro and others}, - journal={Nature biotechnology}, - volume={23}, - number={12}, - pages={1509--1515}, - year={2005}, - publisher={Nature Publishing Group} -} - </citation> - <citation type="bibtex"> -@article{delepine2018retropath2, - title={RetroPath2. 0: a retrosynthesis workflow for metabolic engineers}, - author={Del{\'e}pine, Baudoin and Duigou, Thomas and Carbonell, Pablo and Faulon, Jean-Loup}, - journal={Metabolic engineering}, - volume={45}, - pages={158--170}, - year={2018}, - publisher={Elsevier}} - </citation> - <citation type="bibtex"> -@article{ebrahim2013cobrapy, - title={COBRApy: COnstraints-based reconstruction and analysis for python}, - author={Ebrahim, Ali and Lerman, Joshua A and Palsson, Bernhard O and Hyduke, Daniel R}, - journal={BMC systems biology}, - volume={7}, - number={1}, - pages={74}, - year={2013}, - publisher={Springer} -} - </citation> - <citation type="bibtex"> -@article{bornstein2008libsbml, - title={LibSBML: an API library for SBML}, - author={Bornstein, Benjamin J and Keating, Sarah M and Jouraku, Akiya and Hucka, Michael}, - journal={Bioinformatics}, - volume={24}, - number={6}, - pages={880--881}, - year={2008}, - publisher={Oxford University Press} -} - </citation> + <citation type="doi">10.1038/nbt1156</citation> + <citation type="doi">10.1016/j.ymben.2017.12.002</citation> + <citation type="doi">10.1186/1752-0509-7-74</citation> + <citation type="doi">10.1093/bioinformatics/btn051</citation> </citations> </tool> \ No newline at end of file
--- a/test-data/E.coli.sbml Mon Jan 03 15:34:21 2022 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,132876 +0,0 @@ -<?xml version='1.0' encoding='UTF-8' standalone='no'?> -<sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" fbc:required="false" level="3" version="1" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:html="http://www.w3.org/1999/xhtml"> - <model fbc:strict="true" id="bigg_iAF1260" metaid="_533bc6ed-544a-488c-bad6-6a5f38656d9c" name="Escherichia coli str. K-12 substr. MG1655" sboTerm="SBO:0000624"> - <notes> - <html:p>ID: bigg_iAF1260</html:p><html:p>Description: Escherichia coli str. K-12 substr. MG1655</html:p><html:p>LB: -999999.0</html:p><html:p>UB: 999999.0</html:p><html:p>MNXref Version: 2018/09/14</html:p><html:p>Processed Date: 2018/09/20</html:p><html:p>Source ID: iAF1260</html:p><html:p>Source Reference: PMID:26476456</html:p><html:p>Source Link: http://bigg.ucsd.edu</html:p><html:p>Taxid: 83333</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_533bc6ed-544a-488c-bad6-6a5f38656d9c"> - <bqbiol:hasTaxon> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/taxonomy/83333"/> - </rdf:Bag> - </bqbiol:hasTaxon> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:listOfObjectives xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" fbc:activeObjective="obj_biomass"> - <fbc:objective fbc:id="obj_biomass" fbc:type="maximize"> - <fbc:listOfFluxObjectives> - <fbc:fluxObjective fbc:coefficient="1" 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boundaryCondition="false" compartment="MNXC3" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="false" id="MNXM836__64__MNXC3" metaid="_6a36be34-d1ef-453f-b8ed-70b7f4d2e0a8" name="D-mannose 1-phosphate"> - <notes> - <html:p>COMPOUND_ID: MNXM836</html:p><html:p>SOURCE: M_man1p_c</html:p><html:p>FORMULA: C6H11O9P</html:p><html:p>MASS: 258.121</html:p><html:p>CHARGE: -2</html:p><html:p>XREFS: chebi:21058;chebi:35374;chebi:4210;bigg:M_man1p;bigg:man1p;deprecated:MNXM89839;deprecated:MNXM90815;hmdb:HMDB01436;hmdb:HMDB06330;kegg:C00636;reactome:532531;sabiork:1342;seed:cpd00485</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6a36be34-d1ef-453f-b8ed-70b7f4d2e0a8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM836"/> - <rdf:li 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rdf:resource="http://identifiers.org/hmdb/HMDB62693"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00189"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D05074"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ETHANOL-AMINE"/> - <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00162"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - </species> - <species boundaryCondition="false" compartment="MNXC3" constant="false" fbc:charge="1" fbc:chemicalFormula="H4N" hasOnlySubstanceUnits="false" id="MNXM15__64__MNXC3" metaid="_2bf6a9e5-1292-43af-a69c-f6d77d08ea92" name="NH4(+)"> - <notes> - <html:p>COMPOUND_ID: MNXM15</html:p><html:p>SOURCE: M_nh4_c;M_nh4_e;M_nh4_m;M_nh4_x</html:p><html:p>FORMULA: H4N</html:p><html:p>MASS: 18.0379</html:p><html:p>CHARGE: 1</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/chebi/CHEBI:49783"/> - <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7434"/> - <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:7435"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.metabolite/M_nh3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.metabolite/M_nh4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.metabolite/nh3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.metabolite/nh4"/> - <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB00051"/> - <rdf:li rdf:resource="http://identifiers.org/hmdb/HMDB41827"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00014"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C01342"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.drug/D02916"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIA"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMMONIUM"/> - <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd00013"/> - <rdf:li rdf:resource="http://identifiers.org/seed.compound/cpd19013"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - </species> - <species boundaryCondition="false" compartment="MNXC3" constant="false" fbc:charge="-1" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="false" id="MNXM42__64__MNXC3" metaid="c200c5ab-cf34-429e-8432-e2844a0d0887" name="L-aspartate"> - <notes> - <html:p>COMPOUND_ID: MNXM42</html:p><html:p>SOURCE: M_asp__L_c;M_asp__L_e;M_asp__L_m;M_asp__L_n;M_asp__L_x</html:p><html:p>FORMULA: C4H6NO4</html:p><html:p>MASS: 132.0953</html:p><html:p>CHARGE: -1</html:p><html:p>XREFS: 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name="melibiose"> - <notes> - <html:p>COMPOUND_ID: MNXM1434</html:p><html:p>SOURCE: M_6dg_c;M_melib_c;M_melib_e</html:p><html:p>FORMULA: C12H22O11</html:p><html:p>MASS: 342.2965</html:p><html:p>CHARGE: 0</html:p><html:p>XREFS: chebi:20943;chebi:25182;chebi:28053;chebi:60170;chebi:6733;bigg:6dg;bigg:M_6dg;deprecated:MNXM17078;hmdb:HMDB00048;kegg:C05402;kegg:G01275;sabiork:2789;seed:cpd03198</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a8e8606f-3880-4e78-b082-910ccad4cc75"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.chemical/MNXM1434"/> - <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:20943"/> - <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:25182"/> - <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:28053"/> - <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:60170"/> - 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species="MNXM142__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM142__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R114DB993" metaid="c7618e9d-7999-4913-9196-e5407495505f" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_23CCMPtex</html:p><html:p>REACTION: MNXR94720</html:p><html:p>XREFS: bigg:23CCMPtex;bigg:R_23CCMPtex;deprecated:MNXR29;seed:rxn07926</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c7618e9d-7999-4913-9196-e5407495505f"> 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rdf:resource="http://identifiers.org/bigg.reaction/AMAOTr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMAOTr"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03231"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DAPASYN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/3057"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_BIOA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1140__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3090__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1141__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM16__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R18E86EAA" metaid="_79adc8a5-924f-452e-aec8-076a082f0809" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AOBUTDs</html:p><html:p>REACTION: MNXR95851</html:p><html:p>CLASSIFICATION: 1.1.1.381</html:p><html:p>PATHWAYS: kegg:Glycine, serine and threonine metabolism;metacyc:L-threonine degradation III (to methylglyoxal);metacyc:RXN-14249;metacyc:RXN-16001;metacyc:aminopropanol phosphate biosynthesis II;seed:Threonine_degradation;seed:Threonine_degradation/Threonine_to_Methylglyoxal</html:p><html:p>XREFS: rhea:25653;rhea:25654;rhea:25655;rhea:25656;bigg:AOBUTDs;bigg:AOBUTDsm;bigg:AOBUTDxs;bigg:R_AOBUTDs;bigg:R_AOBUTDsm;bigg:R_AOBUTDxs;deprecated:MNXR68366;deprecated:MNXR731;kegg:R03758;metacyc:THREOSPON-RXN;seed:rxn02666</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_79adc8a5-924f-452e-aec8-076a082f0809"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95851"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.381"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25653"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25654"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25655"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25656"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOBUTDs"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOBUTDsm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AOBUTDxs"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AOBUTDs"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AOBUTDsm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AOBUTDxs"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03758"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THREOSPON-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SPONTANEOUS"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM114087__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1106__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R190201DD" metaid="edbf7e7c-d60d-4b8b-9c88-932a1f12e015" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PAPSR</html:p><html:p>REACTION: MNXR102376</html:p><html:p>CLASSIFICATION: 1.8.4.8</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;kegg:Sulfur metabolism;metacyc:sulfate reduction I (assimilatory);seed:Inorganic_Sulfur_Assimilation;seed:Inorganic_Sulfur_Assimilation/Sulfate_to_Sulfide</html:p><html:p>XREFS: bigg:PAPSR;bigg:R_PAPSR;deprecated:MNXR83571;kegg:R02021;metacyc:1.8.4.8-RXN;seed:rxn05239</html:p><html:p>GENE ASSOCIATION: (bact:CYSH_ECOLI and bact:THIO2_ECOLI) or (bact:CYSH_ECOLI and bact:THIO_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#edbf7e7c-d60d-4b8b-9c88-932a1f12e015"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102376"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.8"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PAPSR"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PAPSR"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02021"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:1.8.4.8-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CYSH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_THIO2_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CYSH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_THIO_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM49__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM96993__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM105630__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM148__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM45__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R19302B30" metaid="f0d20715-fcd0-4427-907c-b81b735607cb" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ALAt2pp</html:p><html:p>REACTION: MNXR95704</html:p><html:p>XREFS: rhea:29443;rhea:29444;rhea:29445;rhea:29446;bigg:ALAt2pp;bigg:ALAt2r;bigg:ALAt2rL;bigg:ALAtm;bigg:ALAtx;bigg:R_ALAt2pp;bigg:R_ALAt2r;bigg:R_ALAt2rL;bigg:R_ALAtm;bigg:R_ALAtx;metacyc:RXN0-5202;sabiork:13939#1;seed:rxn05496;seed:rxn08101</html:p><html:p>GENE ASSOCIATION: (bact:CYCA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f0d20715-fcd0-4427-907c-b81b735607cb"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95704"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29443"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29444"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29445"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29446"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAt2rL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAtx"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAt2rL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAtx"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5202"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_CYCA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM32__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM32__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R19303306" metaid="_2a163665-661c-42f2-b480-f06433f7cabf" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RNTR1c</html:p><html:p>REACTION: MNXR104071</html:p><html:p>XREFS: bigg:RNTR1c;bigg:R_RNTR1c;deprecated:MNXR51051</html:p><html:p>GENE ASSOCIATION: (bact:FENR_ECOLI and bact:FLAV_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FENR_ECOLI and bact:FLAW_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FLAV_ECOLI and bact:NRDD_ECOLI) or (bact:FLAW_ECOLI and bact:NRDD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2a163665-661c-42f2-b480-f06433f7cabf"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104071"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNTR1c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNTR1c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3707__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM286__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4076__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1942C634" metaid="_6048752d-0b1d-4bed-ab5b-8b418ac3a0bb" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3HAD180</html:p><html:p>REACTION: MNXR94883</html:p><html:p>CLASSIFICATION: 2.3.1.-;4.2.1.-;4.2.1.61</html:p><html:p>PATHWAYS: kegg:Biosynthesis of unsaturated fatty acids;kegg:Fatty acid biosynthesis;kegg:Fatty acid metabolism</html:p><html:p>XREFS: bigg:3HAD180;bigg:3HAD180_1;bigg:R_3HAD180;bigg:R_3HAD180_1;deprecated:MNXR148;deprecated:MNXR30472;deprecated:MNXR68174;kegg:R07764;seed:rxn07979</html:p><html:p>GENE ASSOCIATION: (bact:FABA_ECOLI) or (bact:FABZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6048752d-0b1d-4bed-ab5b-8b418ac3a0bb"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94883"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.-"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.61"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD180"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD180_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3HAD180"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3HAD180_1"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07764"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FABA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FABZ_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6417__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2573__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R19A156DE" metaid="_3a9e4a31-a6e7-4ec0-a215-8b0a5dcaccaa" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_dgsn_e</html:p><html:p>REACTION: MNXR98408</html:p><html:p>XREFS: bigg:EX_dgsn_e;bigg:R_EX_dgsn_e</html:p><html:p>PROP 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R_2AGPE161tipp</html:p><html:p>REACTION: MNXR94754</html:p><html:p>XREFS: bigg:2AGPE161tipp;bigg:R_2AGPE161tipp;deprecated:MNXR59</html:p><html:p>GENE ASSOCIATION: (bact:LPLT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_319b098b-8c0a-42b4-b369-8b421e2f13a8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94754"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPE161tipp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_2AGPE161tipp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LPLT_ECOLI"/> - 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species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90332__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R19C1B2BE" metaid="_50907ad3-c3ef-4970-bc30-f8a1907715fe" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2ATE181</html:p><html:p>REACTION: MNXR101175</html:p><html:p>XREFS: bigg:LPLIPAL2ATE181;bigg:R_LPLIPAL2ATE181</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_50907ad3-c3ef-4970-bc30-f8a1907715fe"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101175"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL2ATE181"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL2ATE181"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1773__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3449__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM368__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7023__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R19C935D9" metaid="a0db8ab3-f574-4165-8838-28c1facc582e" 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rdf:resource="http://identifiers.org/rhea/29610"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NHFRBO"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NHFRBO"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02492"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14138"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/2422"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_NORV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NORW_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM228__64__MNXC3" stoichiometry="2"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM579__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1B0EEEA6" metaid="e567d77e-4279-474f-8f41-d775148c3ddc" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_uacgam_e</html:p><html:p>REACTION: MNXR99010</html:p><html:p>XREFS: bigg:EX_uacgam_e;bigg:R_EX_uacgam_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e567d77e-4279-474f-8f41-d775148c3ddc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99010"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_uacgam_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_uacgam_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM47__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1B34A726" metaid="b131214f-5095-4b8a-bb27-cd865789dcfc" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_Kt2pp</html:p><html:p>REACTION: MNXR100951</html:p><html:p>XREFS: rhea:28490;rhea:28491;rhea:28492;rhea:28493;bigg:Kt2pp;bigg:Kt2r;bigg:R_Kt2pp;bigg:R_Kt2r;metacyc:TRANS-RXN-3;seed:rxn05595;seed:rxn08769</html:p><html:p>GENE ASSOCIATION: (bact:KCH_ECOLI) or (bact:KUP_ECOLI) or (bact:SAPD_ECOLI and bact:TRKA_ECOLI and bact:TRKG_ECOLI) or (bact:SAPD_ECOLI and bact:TRKA_ECOLI and bact:TRKH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b131214f-5095-4b8a-bb27-cd865789dcfc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100951"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28490"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28491"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28492"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28493"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Kt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/Kt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_Kt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_Kt2r"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-3"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_KCH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_KUP_ECOLI"/> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_SAPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TRKA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TRKG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_SAPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TRKA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TRKH_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM95__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM95__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1B491561" metaid="_5e91800b-84bd-4be9-a827-8b2bfd43b63a" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_inost_e</html:p><html:p>REACTION: MNXR98682</html:p><html:p>XREFS: bigg:EX_inost_e;bigg:R_EX_inost_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5e91800b-84bd-4be9-a827-8b2bfd43b63a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98682"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_inost_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_inost_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM127__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1B68F2C3" metaid="a1cabdc7-bb53-451c-85e9-de3609532ad7" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_cmp_e</html:p><html:p>REACTION: MNXR98352</html:p><html:p>XREFS: bigg:EX_cmp_e;bigg:R_EX_cmp_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a1cabdc7-bb53-451c-85e9-de3609532ad7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98352"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cmp_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_cmp_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM31__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1B6C856D" metaid="_0756d38e-b6a0-49f1-9387-e5afca5bdb46" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_TARTD</html:p><html:p>REACTION: MNXR104718</html:p><html:p>CLASSIFICATION: 4.2.1.32</html:p><html:p>PATHWAYS: kegg:Glyoxylate and dicarboxylate metabolism;seed:The_Tartronate_Semialdehyde_Hub;seed:The_Tartronate_Semialdehyde_Hub/Tartrate_to_Oxaloacetate</html:p><html:p>XREFS: rhea:15413;rhea:15414;rhea:15415;rhea:15416;bigg:R_TARTD;bigg:TARTD;deprecated:MNXR4981;deprecated:MNXR79465;kegg:R00339;metacyc:LTARTDEHYDRA-RXN;seed:rxn00245</html:p><html:p>GENE ASSOCIATION: (bact:TTDA_ECOLI and bact:TTDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0756d38e-b6a0-49f1-9387-e5afca5bdb46"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104718"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.32"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15413"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15414"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15415"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15416"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_TARTD"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TARTD"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00339"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:LTARTDEHYDRA-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_TTDA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TTDB_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM816__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM46__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1B812DF8" metaid="f2025688-0eb9-46ce-aeaa-67577a57cd9f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AGM4PA</html:p><html:p>REACTION: MNXR95546</html:p><html:p>XREFS: bigg:AGM4PA;bigg:AGM4PApp;bigg:R_AGM4PA;bigg:R_AGM4PApp;deprecated:MNXR552;deprecated:MNXR68306;seed:rxn08076</html:p><html:p>GENE ASSOCIATION: (bact:AMPD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f2025688-0eb9-46ce-aeaa-67577a57cd9f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95546"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM4PA"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM4PApp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AGM4PA"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AGM4PApp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_AMPD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM63488__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM3060__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM59271__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R1B820E4B" metaid="_7c2ca0dd-f639-4e95-b740-1907ce58f70d" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_THYMtex</html:p><html:p>REACTION: MNXR104853</html:p><html:p>XREFS: bigg:R_THYMt;bigg:R_THYMtex;bigg:R_r0921;bigg:THYMt;bigg:THYMtex;bigg:r0921;deprecated:MNXR5070;metacyc:TRANS-RXN0-524;seed:rxn09309</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_7c2ca0dd-f639-4e95-b740-1907ce58f70d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104853"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_THYMt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_THYMtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_r0921"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THYMt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THYMtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r0921"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-524"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM386__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM386__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R1BAE5916" metaid="a98d9126-3a44-43ed-9ba8-afe26f7489a0" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CYNTtex</html:p><html:p>REACTION: MNXR96963</html:p><html:p>XREFS: bigg:CYNTtex;bigg:R_CYNTtex;deprecated:MNXR1330;deprecated:MNXR68602;metacyc:TRANS-RXN-14;seed:rxn08279</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - 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rdf:resource="http://identifiers.org/kegg.reaction/R02094"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DTMPKI-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_KTHY_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM152__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM257__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1CB11606" metaid="cb4c14b9-8bd8-4a26-bb02-8feb7bde1e36" reversible="false" 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bacteria);seed:Isoprenoid_Biosynthesis;seed:Isoprenoid_Biosynthesis/AcetylCoA_and_AcetoacetylCoA_to_IsopentenylPP;seed:Isoprenoid_Biosynthesis/AcetylCoA_to_AcetoacetylCoA;seed:Isoprenoid_Biosynthesis/FarnesylPP_to_UndecaprenylPP;seed:Isoprenoid_Biosynthesis/GeranylPP_and_IsopentenylPP_to_FarnesylPP;seed:Isoprenoid_Biosynthesis/IsopentenylPP_and_DimethylallylPP_to_GeranylPP;seed:Isoprenoid_Biosynthesis/IsopentenylPP_to_DimethylallylPP;seed:Isoprenoid_Biosynthesis/Pyruvate_and_Glyceraldehyde3P_to_DimethylallylPP;seed:Isoprenoid_Biosynthesis/Pyruvate_and_Glyceraldehyde3P_to_IsopentenylPP;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Erythrose4P_and_Deoxyxylulose5P_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Glyceraldehyde3P_and_Pyruvate_to_Deoxyxylulose5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Pyridoxal_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Pyridoxamine_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Pyridoxine_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Ribulose5P_and_Glyceraldehyde3P_to_Pyridoxal5P</html:p><html:p>XREFS: 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constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM622__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R1D273CBA" metaid="b4ed0559-5238-4652-9fc9-ec60d7324d17" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CBMKr</html:p><html:p>REACTION: MNXR96482</html:p><html:p>CLASSIFICATION: 2.7.2.2</html:p><html:p>PATHWAYS: kegg:Arginine biosynthesis;kegg:Carbon metabolism;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;kegg:Purine metabolism;metacyc:L-citrulline degradation;metacyc:allantoin degradation IV 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<bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96482"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10152"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10153"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10154"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10155"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBMKr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CBMKr"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00150"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CARBAMATE-KINASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/93"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef 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rdf:resource="http://identifiers.org/reactome/R-DRE-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-70609"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-70609"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/762"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_GLSA1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_GLSA2_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PABB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM37__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM15__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1D9709E5" metaid="_0f22311d-573a-47c3-b969-91ea5cea98ac" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PPAt4pp</html:p><html:p>REACTION: MNXR135979</html:p><html:p>XREFS: seed:rxn09171</html:p><html:p>GENE ASSOCIATION: (bact:PUTP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0f22311d-573a-47c3-b969-91ea5cea98ac"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR135979"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PUTP_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM27__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM356__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM27__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM356__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1D998169" metaid="_3f16caaa-c766-4bb9-b99e-cded3de0d155" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_ppa_e</html:p><html:p>REACTION: MNXR124035</html:p><html:p>XREFS: metacyc:TRANS-RXN0-505;seed:rxn09172;seed:rxn10836</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3f16caaa-c766-4bb9-b99e-cded3de0d155"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR124035"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-505"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM356__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1DA3ACEB" metaid="_2fe9aea7-247e-450a-b65c-1ebb5fb17a3b" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FEOXAMUtpp</html:p><html:p>REACTION: MNXR99555</html:p><html:p>XREFS: bigg:FEOXAMUtpp;bigg:R_FEOXAMUtpp;seed:rxn08516</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2fe9aea7-247e-450a-b65c-1ebb5fb17a3b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99555"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMUtpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FEOXAMUtpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90827__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90827__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1DB7D314" metaid="a4fb7ed6-270f-4084-b7cd-c205067b60d9" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_tcynt_e</html:p><html:p>REACTION: MNXR98962</html:p><html:p>XREFS: bigg:EX_tcynt_e;bigg:R_EX_tcynt_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a4fb7ed6-270f-4084-b7cd-c205067b60d9"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98962"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tcynt_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_tcynt_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM762__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1DCB29B0" metaid="_0fe4b8e1-25a7-4bfa-99ae-c1d6413101b5" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_HACD2i</html:p><html:p>REACTION: MNXR100543</html:p><html:p>CLASSIFICATION: 1.1.1.211;1.1.1.35</html:p><html:p>PATHWAYS: kegg:Fatty acid degradation;kegg:Fatty acid elongation;kegg:Fatty acid metabolism;kegg:Metabolic pathways;metacyc:pyruvate fermentation to hexanol (engineered)</html:p><html:p>XREFS: rhea:31143;rhea:31144;rhea:31145;rhea:31146;bigg:HACD2;bigg:HACD2_1;bigg:HACD2i;bigg:HACD2m;bigg:R_HACD2;bigg:R_HACD2_1;bigg:R_HACD2i;bigg:R_HACD2m;deprecated:MNXR2901;deprecated:MNXR62629;deprecated:MNXR91139;kegg:R04748;metacyc:RXN-12570;reactome:R-ATH-77323;reactome:R-BTA-77323;reactome:R-CEL-77323;reactome:R-CFA-77323;reactome:R-DDI-77323;reactome:R-DRE-77323;reactome:R-GGA-77323;reactome:R-HSA-77323;reactome:R-MMU-77323;reactome:R-OSA-77323;reactome:R-RNO-77323;reactome:R-SSC-77323;reactome:R-TGU-77323;reactome:R-XTR-77323;sabiork:4404;seed:rxn03249</html:p><html:p>GENE ASSOCIATION: (bact:FADB_ECOLI) or (bact:FADJ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0fe4b8e1-25a7-4bfa-99ae-c1d6413101b5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100543"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.211"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.35"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/31143"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/31144"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/31145"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/31146"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HACD2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HACD2_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HACD2i"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HACD2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HACD2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HACD2_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HACD2i"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HACD2m"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04748"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-12570"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77323"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77323"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/4404"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FADB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FADJ_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM757__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM717__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1DD0758E" metaid="fbf4964f-abcc-4450-94a3-25f632fc1e80" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_3PEPTabcpp</html:p><html:p>REACTION: MNXR94970</html:p><html:p>XREFS: bigg:3PEPTabcpp;bigg:R_3PEPTabcpp;deprecated:MNXR50745;deprecated:MNXR68200;seed:rxn08003</html:p><html:p>GENE ASSOCIATION: (bact:MPPA_ECOLI and bact:OPPB_ECOLI and bact:OPPC_ECOLI and bact:OPPD_ECOLI and bact:OPPF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#fbf4964f-abcc-4450-94a3-25f632fc1e80"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94970"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3PEPTabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3PEPTabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_MPPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPF_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90242__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90242__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_0" id="R1DE2CDE" metaid="_6e77043b-c63d-4809-83b3-8b1e79092703" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FHL</html:p><html:p>REACTION: MNXR99594</html:p><html:p>PATHWAYS: metacyc:mixed acid fermentation</html:p><html:p>XREFS: rhea:27610;rhea:27611;rhea:27612;rhea:27613;bigg:FHL;bigg:R_FHL;deprecated:MNXR55423;deprecated:MNXR68996;metacyc:FHLMULTI-RXN;seed:rxn08518</html:p><html:p>GENE ASSOCIATION: (bact:FDHF_ECOLI and bact:HYCB_ECOLI and bact:HYCC_ECOLI and bact:HYCD_ECOLI and bact:HYCE_ECOLI and bact:HYCF_ECOLI and bact:HYCG_ECOLI) or (bact:FDHF_ECOLI and bact:HYFA_ECOLI and bact:HYFB_ECOLI and bact:HYFC_ECOLI and bact:HYFD_ECOLI and bact:HYFE_ECOLI and bact:HYFF_ECOLI and bact:HYFG_ECOLI and bact:HYFH_ECOLI and bact:HYFI_ECOLI and bact:HYFJ_ECOLI)</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-b: null</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6e77043b-c63d-4809-83b3-8b1e79092703"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99594"/> - <rdf:li 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fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM160__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM160__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1EEFF546" metaid="d95fb113-3b14-485a-a438-badc1326f42f" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MALt2_3pp</html:p><html:p>REACTION: MNXR101371</html:p><html:p>XREFS: bigg:MALt2_3;bigg:MALt2_3pp;bigg:R_MALt2_3;bigg:R_MALt2_3pp;deprecated:MNXR3408;seed:rxn08866;seed:rxn10156</html:p><html:p>GENE ASSOCIATION: (bact:DCUA_ECOLI) or (bact:DCUB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d95fb113-3b14-485a-a438-badc1326f42f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101371"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALt2_3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALt2_3pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MALt2_3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MALt2_3pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_DCUA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DCUB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="3"/> - <speciesReference constant="true" species="MNXM98__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="3"/> - <speciesReference constant="true" species="MNXM98__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1EF64C23" metaid="_6c4c2764-4fb3-4ef4-b8c9-ee1a878a4814" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_galctn__D_e</html:p><html:p>REACTION: MNXR98540</html:p><html:p>XREFS: bigg:EX_galctn__D_e;bigg:R_EX_galctn__D_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6c4c2764-4fb3-4ef4-b8c9-ee1a878a4814"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98540"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_galctn__D_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_galctn__D_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1734__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1F0416BC" metaid="aad3537a-d59b-49d7-aa99-7ece797e7567" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MLTG2</html:p><html:p>REACTION: MNXR138615</html:p><html:p>XREFS: bigg:MLTG2;bigg:RE0915E;bigg:R_MLTG2;bigg:R_RE0915E;deprecated:MNXR55722</html:p><html:p>GENE ASSOCIATION: (bact:MALZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#aad3537a-d59b-49d7-aa99-7ece797e7567"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138615"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MLTG2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RE0915E"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MLTG2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RE0915E"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MALZ_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5663__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM41__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61038__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1F0E9037" metaid="_3b0e4f83-5490-4dac-91cd-b26b4deef2e1" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CPGNtonex</html:p><html:p>REACTION: MNXR96875</html:p><html:p>XREFS: bigg:CPGNtonex;bigg:R_CPGNtonex;deprecated:MNXR1271;deprecated:MNXR68580;seed:rxn08250</html:p><html:p>GENE ASSOCIATION: (bact:EXBB_ECOLI and bact:EXBD_ECOLI and bact:FHUE_ECOLI and bact:TONB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3b0e4f83-5490-4dac-91cd-b26b4deef2e1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96875"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CPGNtonex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CPGNtonex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_EXBB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_EXBD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FHUE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TONB_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM114191__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM114191__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R1F18A6E1" metaid="_96342203-ea60-46b9-ab00-13c150401940" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_SBTtex</html:p><html:p>REACTION: MNXR104288</html:p><html:p>XREFS: bigg:R_SBT_Dt;bigg:R_SBT_Dtde;bigg:R_SBTtex;bigg:SBT_Dt;bigg:SBT_Dtde;bigg:SBTtex;deprecated:MNXR4783;seed:rxn09243;seed:rxn09662</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - 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- <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM469__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM469__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1F2654AC" metaid="ecd3c8e4-7911-4716-96c5-36b1d453816a" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_TDP</html:p><html:p>REACTION: MNXR104756</html:p><html:p>CLASSIFICATION: 3.6.1;3.6.1.-;3.6.1.15</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Thiamine metabolism</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/rhea/28000"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28001"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_TDP"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_TDPm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TDP"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TDPm"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00615"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-3542"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_NUDJ_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM256__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM662__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1F2ADD4D" metaid="_30dfc6a2-c45d-45bb-84c0-2b5899661c04" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2A120</html:p><html:p>REACTION: MNXR135861</html:p><html:p>CLASSIFICATION: 3.1.1.5</html:p><html:p>XREFS: deprecated:MNXR69347;seed:rxn08817</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_30dfc6a2-c45d-45bb-84c0-2b5899661c04"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR135861"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.5"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5461__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM402__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM66__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R1F63A39A" metaid="ae346c7e-328e-4874-888d-1c198cbe1a86" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2A180</html:p><html:p>REACTION: MNXR101167</html:p><html:p>CLASSIFICATION: 3.1.1.5</html:p><html:p>XREFS: bigg:LPLIPAL2A180;bigg:R_LPLIPAL2A180;deprecated:MNXR3295;deprecated:MNXR69351;deprecated:MNXR83225;seed:rxn08822</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ae346c7e-328e-4874-888d-1c198cbe1a86"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101167"/> - <rdf:li 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rdf:resource="http://identifiers.org/biocyc/META:ALARACECAT-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/862"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_ALR1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ALR2_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM156__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM32__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2109D801" metaid="_18ec09cd-ab0a-4ffb-b095-33741a414325" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3OAR181</html:p><html:p>REACTION: 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reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARBtex</html:p><html:p>REACTION: MNXR135734</html:p><html:p>XREFS: bigg:ARAB_Lt;bigg:ARBtex;bigg:R_ARAB_Lt;bigg:R_ARBtex;deprecated:MNXR95913;seed:rxn08142;seed:rxn09695</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_076fa998-9e58-4e96-ae2d-7d30ece3f357"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR135734"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARAB_Lt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBtex"/> - <rdf:li 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reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_mnl_e</html:p><html:p>REACTION: MNXR98763</html:p><html:p>XREFS: bigg:EX_mnl_e;bigg:R_EX_mnl_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f64beb10-e8ba-4685-853b-107547b9bc31"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98763"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mnl_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_mnl_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM615__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" 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metaid="_2627dd90-0fd7-40e5-94bb-1ad261b49014" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NACtex</html:p><html:p>REACTION: MNXR101808</html:p><html:p>XREFS: bigg:NACDe;bigg:NACt;bigg:NACtex;bigg:NACtpp;bigg:R_NACDe;bigg:R_NACt;bigg:R_NACtex;bigg:R_NACtpp;reactome:R-BTA-8869603;reactome:R-CFA-8869603;reactome:R-DME-8869603;reactome:R-DRE-8869603;reactome:R-GGA-8869603;reactome:R-HSA-8869603;reactome:R-MMU-8869603;reactome:R-RNO-8869603;reactome:R-SSC-8869603;reactome:R-TGU-8869603;reactome:R-XTR-8869603;seed:rxn05310;seed:rxn08969;seed:rxn08970</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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rdf:resource="http://identifiers.org/reactome/R-DRE-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-8869603"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-8869603"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - 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rdf:resource="http://identifiers.org/bigg.reaction/R_ECOAH1_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ECOAH1_2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ECOAH1m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ECOAH1x"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03026"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-11667"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77314"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77314"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/2876"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FADB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FADJ_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM214__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM446__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R246505BE" metaid="fe34c7fd-441b-4c04-8956-0356d87addc9" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_pser__L_e</html:p><html:p>REACTION: MNXR98880</html:p><html:p>XREFS: bigg:EX_pser__L_e;bigg:R_EX_pser__L_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#fe34c7fd-441b-4c04-8956-0356d87addc9"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98880"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pser__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_pser__L_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM379__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R247CAC7E" metaid="_34f5a7c9-ad59-433b-ac52-e9ed9ba4d73b" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_pyr_e</html:p><html:p>REACTION: MNXR98895</html:p><html:p>XREFS: bigg:EX_pyr_e;bigg:R_EX_pyr_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_34f5a7c9-ad59-433b-ac52-e9ed9ba4d73b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98895"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pyr_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_pyr_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM23__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R249EFBE7" metaid="_61c823d4-31eb-42e7-bd9c-d5dbbbe6e3f6" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_EAR141x</html:p><html:p>REACTION: MNXR97853</html:p><html:p>CLASSIFICATION: 1.3.1.9</html:p><html:p>XREFS: bigg:EAR141x;bigg:R_EAR141x</html:p><html:p>GENE ASSOCIATION: (bact:FABI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_61c823d4-31eb-42e7-bd9c-d5dbbbe6e3f6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97853"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR141x"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EAR141x"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FABI_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5960__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM162426__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R24B6CDEE" metaid="_327b5b29-42d1-4563-8449-2fa9d1d2584e" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DHPTPE</html:p><html:p>REACTION: MNXR142300</html:p><html:p>XREFS: seed:rxn08341</html:p><html:p>GENE ASSOCIATION: (bact:FOLX_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_327b5b29-42d1-4563-8449-2fa9d1d2584e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR142300"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FOLX_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM397__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM93349__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R24BED2F" metaid="_0355bb30-ceb0-4ae5-a113-19ded5def4c1" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FDH4pp_1</html:p><html:p>REACTION: MNXR99479</html:p><html:p>CLASSIFICATION: 1.2.2.1</html:p><html:p>XREFS: bigg:FDH4pp_1;bigg:R_FDH4pp_1;seed:rxn08465</html:p><html:p>GENE ASSOCIATION: (bact:FDNG_ECOLI and bact:FDNH_ECOLI and bact:FDNI_ECOLI) or (bact:FDOG_ECOLI and bact:FDOH_ECOLI and bact:FDOI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0355bb30-ceb0-4ae5-a113-19ded5def4c1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99479"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.2.1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FDH4pp_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FDH4pp_1"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> 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species="MNXM13__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM191__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R24C6A3DC" metaid="_315f49fd-cb39-4092-931e-b16d44b90b70" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MDDCP2pp</html:p><html:p>REACTION: MNXR101430</html:p><html:p>CLASSIFICATION: 3.4.16.4</html:p><html:p>XREFS: bigg:MDDCP2ex;bigg:MDDCP2pp;bigg:R_MDDCP2ex;bigg:R_MDDCP2pp;deprecated:MNXR3455;deprecated:MNXR69419;seed:rxn08891</html:p><html:p>GENE ASSOCIATION: (bact:DACA_ECOLI) or (bact:DACB_ECOLI) or (bact:DACC_ECOLI) or (bact:DACD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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<reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2789138B" metaid="e4bd7f3f-1c51-4c98-b6f0-2fa81bdfa11b" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DSERDHr</html:p><html:p>REACTION: MNXR97797</html:p><html:p>XREFS: rhea:30107;rhea:30108;rhea:30109;rhea:30110;bigg:DSERDHr;bigg:R_DSERDHr;deprecated:MNXR1802;deprecated:MNXR68763;seed:rxn08371</html:p><html:p>GENE ASSOCIATION: (bact:YDFG_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e4bd7f3f-1c51-4c98-b6f0-2fa81bdfa11b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97797"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30107"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30108"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30109"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30110"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSERDHr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DSERDHr"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_YDFG_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2124__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM694__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R279EB9F4" metaid="af056adb-aba0-4569-8447-c35093677258" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FACOAL100t2pp</html:p><html:p>REACTION: MNXR129292</html:p><html:p>XREFS: rhea:51820;rhea:51821;rhea:51822;rhea:51823</html:p><html:p>GENE ASSOCIATION: (bact:FADK_ECOLI) or (bact:LCFA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#af056adb-aba0-4569-8447-c35093677258"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR129292"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/51820"/> - 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM486__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R27A5E88F" metaid="_72555ae9-0400-42ee-9556-3fa3ea299b35" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLUR</html:p><html:p>REACTION: MNXR100288</html:p><html:p>CLASSIFICATION: 5.1.1.3</html:p><html:p>PATHWAYS: kegg:D-Glutamine and D-glutamate metabolism;kegg:Metabolic pathways;metacyc:UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);metacyc:UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Aspartate_to_Asparagine;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Fumarate_to_Aspartate;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Glutamate_racemase;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Glutamate_to_Glutamine;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Glutamine_to_Glutamate;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Oxaloacetate_to_Aspartate;seed:Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis/Oxoglutarate_to_Glutamate;seed:Peptidoglycan_Biosynthesis_2;seed:Peptidoglycan_Biosynthesis_2/UDP_N_acetylglucosamine_to_UDP_N_acetylmuramate;seed:Peptidoglycan_Biosynthesis_2/UDP_N_acetylmuramate_to_UDP_N_acetylmuramoyl_plus_more</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/bigg.reaction/GLUR"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLUR"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00260"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUTRACE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/765"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MURI_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM331__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R27ABBB1D" metaid="_20369b6e-8b10-407f-b241-7ff1f4ac4e6e" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_SERtex</html:p><html:p>REACTION: MNXR104354</html:p><html:p>XREFS: rhea:35031;rhea:35032;rhea:35033;rhea:35034;bigg:R_SERtex;bigg:R_SERtp;bigg:R_r1435;bigg:R_r2526;bigg:SERtex;bigg:SERtp;bigg:r1435;bigg:r2526;deprecated:MNXR4825;reactome:R-ATH-8932980;reactome:R-BTA-8932980;reactome:R-CEL-8932980;reactome:R-CFA-8932980;reactome:R-DDI-8932980;reactome:R-DME-8932980;reactome:R-DRE-8932980;reactome:R-GGA-8932980;reactome:R-HSA-8932980;reactome:R-MMU-8932980;reactome:R-OSA-8932980;reactome:R-RNO-8932980;reactome:R-SCE-8932980;reactome:R-SPO-8932980;reactome:R-SSC-8932980;reactome:R-TGU-8932980;reactome:R-XTR-8932980;sabiork:13463;sabiork:13973;seed:rxn09248;seed:rxn10999;seed:rxn13110</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: 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rdf:resource="http://identifiers.org/bigg.reaction/SERtp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r1435"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r2526"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-8932980"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-8932980"/> - <rdf:li 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- <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM80__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R28E1DF48" metaid="_7cb806d4-be2a-46ec-8aa6-027ae3fc637a" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GMAND</html:p><html:p>REACTION: MNXR100377</html:p><html:p>CLASSIFICATION: 4.2.1.47</html:p><html:p>PATHWAYS: kegg:Amino sugar and nucleotide sugar metabolism;kegg:Fructose and mannose metabolism;kegg:Metabolic pathways;metacyc:GDP-6-deoxy-D-talose biosynthesis;metacyc:GDP-D-perosamine biosynthesis;metacyc:GDP-D-rhamnose biosynthesis;metacyc:GDP-L-colitose biosynthesis;metacyc:GDP-L-fucose biosynthesis I (from GDP-D-mannose);metacyc:GDP-mycosamine 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rdf:resource="http://identifiers.org/rhea/23822"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/23823"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GMAND"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GMAND"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00888"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GDPMANDEHYDRA-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/588"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GM4D_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM82__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM516__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R29047877" metaid="e604daae-54bf-465c-bcbf-d98f52e14873" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NMNtex</html:p><html:p>REACTION: MNXR101972</html:p><html:p>XREFS: rhea:28482;rhea:28483;rhea:28484;rhea:28485;bigg:NMNP;bigg:NMNPtpp;bigg:NMNtex;bigg:NMNtn;bigg:R_NMNP;bigg:R_NMNPtpp;bigg:R_NMNtex;bigg:R_NMNtn;deprecated:MNXR3830;seed:rxn08995;seed:rxn08997;seed:rxn10181</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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- </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM355__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM355__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R292715B1" metaid="dd2e9c10-9e70-4380-a8fa-c6a6347a77dc" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLCP2</html:p><html:p>REACTION: MNXR100215</html:p><html:p>CLASSIFICATION: 2.4.1.1</html:p><html:p>XREFS: bigg:GLCP2;bigg:R_GLCP2;deprecated:MNXR50941;deprecated:MNXR53617;deprecated:MNXR80377;seed:rxn08611</html:p><html:p>GENE ASSOCIATION: (bact:PHSG_ECOLI) or (bact:PHSM_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#dd2e9c10-9e70-4380-a8fa-c6a6347a77dc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100215"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCP2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCP2"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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rdf:resource="http://identifiers.org/reactome/R-HSA-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-71334"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-163764"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-71334"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/8744"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_TALA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TALB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM155029__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM258__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM271__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM74__64__MNXC3" 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species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM37__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2A53FBB6" metaid="_022c82b4-c915-4078-ba22-092cb99b0ace" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2E141</html:p><html:p>REACTION: MNXR101185</html:p><html:p>XREFS: bigg:LPLIPAL2E141;bigg:R_LPLIPAL2E141;deprecated:MNXR50978</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_022c82b4-c915-4078-ba22-092cb99b0ace"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101185"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL2E141"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL2E141"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3447__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM368__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM641__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2A573B3D" metaid="_4b40e852-8269-42f0-b27f-026cb95c1148" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_F6Ptex</html:p><html:p>REACTION: MNXR138329</html:p><html:p>XREFS: bigg:F6Ptex;bigg:R_F6Ptex;deprecated:MNXR135797;deprecated:MNXR55336;deprecated:MNXR68834;deprecated:MNXR82513;seed:rxn08432;seed:rxn13638</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_4b40e852-8269-42f0-b27f-026cb95c1148"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138329"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/F6Ptex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_F6Ptex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM155029__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM155029__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2A5C172C" metaid="_66668980-4c2d-4440-b4d2-c504c1965774" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_O16A4COLIPAtex</html:p><html:p>REACTION: MNXR102076</html:p><html:p>XREFS: bigg:O16A4COLIPAtex;bigg:R_O16A4COLIPAtex;deprecated:MNXR3917;deprecated:MNXR69569;seed:rxn09020</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_66668980-4c2d-4440-b4d2-c504c1965774"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102076"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O16A4COLIPAtex"/> - 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3e05efbf-3abe-48e8-89fa-791c92650a21"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101482"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METSOX1abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METSabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_METSOX1abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_METSabc"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-511"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2246__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" 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<speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90941__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90941__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2AC56194" metaid="_0f5bbb9f-5e16-4155-8eb0-313236b6d7b4" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_EDD</html:p><html:p>REACTION: MNXR97898</html:p><html:p>CLASSIFICATION: 4.2.1.12</html:p><html:p>PATHWAYS: kegg:Carbon metabolism;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;kegg:Pentose phosphate pathway;metacyc:Entner-Doudoroff pathway I;seed:Entner-Doudoroff_Pathway;seed:Entner-Doudoroff_Pathway/Gluconate_to_Glyceraldehyde3P_and_Pyruvate;seed:Entner-Doudoroff_Pathway/Gluconate_to_Phosphogluconate;seed:Entner-Doudoroff_Pathway/Glucose_to_Phosphogluconate;seed:Entner-Doudoroff_Pathway/Phosphogluconate_to_Glyceraldehyde3P_and_Pyruvate</html:p><html:p>XREFS: rhea:17277;rhea:17278;rhea:17279;rhea:17280;bigg:EDD;bigg:R_EDD;deprecated:MNXR1874;kegg:R02036;metacyc:PGLUCONDEHYDRAT-RXN;seed:rxn01477</html:p><html:p>GENE ASSOCIATION: (bact:EDD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0f5bbb9f-5e16-4155-8eb0-313236b6d7b4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97898"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.12"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17277"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17278"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17279"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17280"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EDD"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EDD"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02036"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PGLUCONDEHYDRAT-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_EDD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM325__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM649__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2AC67CE1" metaid="_6fab17ab-3e54-4c8c-8ac2-c6ee4a1dc51a" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DMSOtex</html:p><html:p>REACTION: MNXR97533</html:p><html:p>XREFS: rhea:29699;rhea:29700;rhea:29701;rhea:29702;bigg:DMSOtex;bigg:DMSOtpp;bigg:R_DMSOtex;bigg:R_DMSOtpp;deprecated:MNXR1636;metacyc:TRANS-RXN0-273;seed:rxn08358</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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bigg:ACt2ipp;bigg:ACt2m;bigg:ACt2r;bigg:ACt2rpp;bigg:R_ACt2ipp;bigg:R_ACt2m;bigg:R_ACt2r;bigg:R_ACt2rpp;deprecated:MNXR463;metacyc:TRANS-RXN0-571;seed:rxn05488;seed:rxn08061</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_49bcd79c-685b-426d-8eed-c9b956050d7c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95429"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt2ipp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACt2ipp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACt2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-571"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM26__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM26__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2AFD124C" metaid="_47fb3981-6c12-4846-a588-a4db3e754782" reversible="false" sboTerm="SBO:0000185"> - <notes> - 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species="MNXM440__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM440__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2B0B4B54" metaid="dbd39249-040e-4db8-9216-3576ae0f64c1" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GP4GH</html:p><html:p>REACTION: MNXR100398</html:p><html:p>XREFS: rhea:30203;rhea:30204;rhea:30205;rhea:30206;bigg:GP4GH;bigg:R_GP4GH;deprecated:MNXR55606;deprecated:MNXR69182;seed:rxn08667</html:p><html:p>GENE ASSOCIATION: (bact:APAH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#dbd39249-040e-4db8-9216-3576ae0f64c1"> - 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constant="true" species="MNXM01__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM27__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2C96EC4B" metaid="d9d7aa28-5175-4b25-8186-064fe6b9f525" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_SERt2rpp</html:p><html:p>REACTION: MNXR104352</html:p><html:p>XREFS: rhea:28887;rhea:28888;rhea:28889;rhea:28890;bigg:R_SERt2m;bigg:R_SERt2r;bigg:R_SERt2rpp;bigg:R_SERth;bigg:SERt2m;bigg:SERt2r;bigg:SERt2rpp;bigg:SERth;deprecated:MNXR4822;metacyc:TRANS-RXN-71;sabiork:13941#1;seed:rxn05307;seed:rxn09246;seed:rxn09714</html:p><html:p>GENE ASSOCIATION: (bact:SDAC_ECOLI) or (bact:TDCC_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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rdf:resource="http://identifiers.org/bigg.reaction/SERth"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-71"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_SDAC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TDCC_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM53__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM53__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2CA4F1EA" metaid="_5875c74d-12f4-4738-a910-27ef8cdb3034" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_G3PStex</html:p><html:p>REACTION: MNXR99893</html:p><html:p>XREFS: bigg:G3PStex;bigg:R_G3PStex;deprecated:MNXR2451;deprecated:MNXR69077;deprecated:MNXR82538;seed:rxn08566</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5875c74d-12f4-4738-a910-27ef8cdb3034"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99893"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PStex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_G3PStex"/> - 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rhea:30155;rhea:30156;rhea:30157;rhea:30158;bigg:FE3Ri;bigg:R_FE3Ri;deprecated:MNXR55415;deprecated:MNXR68975;deprecated:MNXR82831;seed:rxn08491</html:p><html:p>GENE ASSOCIATION: (bact:FRE_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b2caf1f7-e07c-4624-bc5e-340193eef645"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99524"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30155"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30156"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30157"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30158"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FE3Ri"/> - <rdf:li 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reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ETOHt2rpp</html:p><html:p>REACTION: MNXR97981</html:p><html:p>XREFS: bigg:ETOHt2r;bigg:ETOHt2rpp;bigg:R_ETOHt2r;bigg:R_ETOHt2rpp;deprecated:MNXR1931;seed:rxn08427;seed:rxn10146</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6167726b-afcb-466c-8f39-0efbb83f46bf"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97981"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETOHt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ETOHt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ETOHt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ETOHt2rpp"/> - </rdf:Bag> - 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species="MNXM223__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM77__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2DBAFCE4" metaid="_4bde288f-7d18-4cd4-86b3-336f88cf0b4d" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_2AGPEAT181</html:p><html:p>REACTION: MNXR94763</html:p><html:p>XREFS: bigg:2AGPEAT181;bigg:R_2AGPEAT181;deprecated:MNXR68</html:p><html:p>GENE ASSOCIATION: (bact:AAS_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_4bde288f-7d18-4cd4-86b3-336f88cf0b4d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94763"/> - <rdf:li 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rhea:25302;rhea:25303;rhea:25304;rhea:25305;deprecated:MNXR1717;kegg:R04638;metacyc:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN;sabiork:10428;seed:rxn03173</html:p><html:p>GENE ASSOCIATION: (bact:MUTT_ECOLI) or (bact:NUDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_83143235-0ac4-43fa-a689-a53485142245"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97680"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.67"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25302"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25303"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25304"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25305"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04638"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/10428"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_MUTT_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUDB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM397__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1645__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2E88128F" metaid="_74e5ec4c-a8c3-4f80-a021-e31ee9bb34db" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PPPNtex</html:p><html:p>REACTION: MNXR103136</html:p><html:p>XREFS: rhea:29747;rhea:29748;rhea:29749;rhea:29750;bigg:PPPNtex;bigg:R_PPPNtex;deprecated:MNXR4412;metacyc:TRANS-RXN0-282;seed:rxn09183</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_74e5ec4c-a8c3-4f80-a021-e31ee9bb34db"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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<listOfReactants> - <speciesReference constant="true" species="MNXM1403__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1403__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2EA04D95" metaid="b9190e4f-5524-4ffd-b23d-cab68432c418" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_mg2_e</html:p><html:p>REACTION: MNXR98756</html:p><html:p>XREFS: bigg:EX_mg2_e;bigg:R_EX_mg2_e</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b9190e4f-5524-4ffd-b23d-cab68432c418"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98756"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mg2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_mg2_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM653__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2ECEC843" metaid="_3cee1c1a-518e-445d-8eaf-7107d917234d" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_METSOXR2</html:p><html:p>REACTION: MNXR138594</html:p><html:p>CLASSIFICATION: 1.8.4.14</html:p><html:p>XREFS: bigg:METSOXR2;bigg:R_METSOXR2;deprecated:MNXR69437;deprecated:MNXR83307;kegg:R07608;metacyc:1.8.4.14-RXN;seed:rxn07439;seed:rxn08919</html:p><html:p>GENE ASSOCIATION: (bact:MSRB_ECOLI and bact:THIO2_ECOLI) or (bact:MSRB_ECOLI and 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id="R2F3FF61D" metaid="_40f09877-d730-418b-9d74-402ef4278047" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AGM3PH</html:p><html:p>REACTION: MNXR95544</html:p><html:p>XREFS: bigg:AGM3PH;bigg:R_AGM3PH;deprecated:MNXR550;deprecated:MNXR68304;seed:rxn08074</html:p><html:p>GENE ASSOCIATION: (bact:NAGZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_40f09877-d730-418b-9d74-402ef4278047"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95544"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM3PH"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AGM3PH"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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</bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PNTA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PNTB_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2F66448A" metaid="_0d7261b9-8665-4668-9ce7-d00e0081d9f7" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_AGM3Pt2pp</html:p><html:p>REACTION: MNXR95545</html:p><html:p>XREFS: bigg:AGM3Pt2pp;bigg:R_AGM3Pt2pp;deprecated:MNXR551;deprecated:MNXR68305;seed:rxn08075</html:p><html:p>GENE ASSOCIATION: (bact:AMPG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0d7261b9-8665-4668-9ce7-d00e0081d9f7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95545"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM3Pt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AGM3Pt2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> 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rdf:resource="http://identifiers.org/rhea/25797"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25798"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25799"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_UNK3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UNK3"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07396"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14147"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM276__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM20__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2FBEFD7C" metaid="c11d0eff-3143-4488-95a3-f67774b8aada" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3OAR60</html:p><html:p>REACTION: MNXR94952</html:p><html:p>CLASSIFICATION: 1.1.1.100;2.3.1.-;2.3.1.85;2.3.1.86</html:p><html:p>PATHWAYS: kegg:Fatty acid biosynthesis;kegg:Fatty acid metabolism;kegg:Metabolic pathways;seed:Fatty_Acid_Biosynthesis_FASII;seed:Fatty_Acid_Biosynthesis_FASII/AcetylCoA_to_MalonylCoA</html:p><html:p>XREFS: bigg:3OAR60;bigg:3OAR60_1;bigg:R_3OAR60;bigg:R_3OAR60_1;deprecated:MNXR195;kegg:R04953;seed:rxn05337</html:p><html:p>GENE ASSOCIATION: (bact:FABG_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c11d0eff-3143-4488-95a3-f67774b8aada"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94952"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.85"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.86"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3OAR60"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3OAR60_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3OAR60"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3OAR60_1"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04953"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FABG_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM25602__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM25370__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2FC64CE2" metaid="_0f315e3d-1e42-427b-b604-94abda332d9e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DDPA</html:p><html:p>REACTION: MNXR97218</html:p><html:p>CLASSIFICATION: 2.5.1.54</html:p><html:p>PATHWAYS: kegg:Biosynthesis of amino acids;kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Metabolic pathways;kegg:Phenylalanine, tyrosine and tryptophan biosynthesis;metacyc:3-dehydroquinate biosynthesis I;seed:Chorismate_Synthesis;seed:Chorismate_Synthesis/Erythrose4P_and_Phosphoenolpyruvate_to_Chorismate;seed:Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate);seed:Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)/Erythrose4P_and_Phosphoenolpyruvate_to_Chorismate</html:p><html:p>XREFS: rhea:14717;rhea:14718;rhea:14719;rhea:14720;bigg:DDPA;bigg:DDPAm;bigg:DPHS;bigg:R_DDPA;bigg:R_DDPAm;bigg:R_DPHS;deprecated:MNXR1486;kegg:R01826;metacyc:DAHPSYN-RXN;sabiork:1910;seed:rxn01332</html:p><html:p>GENE ASSOCIATION: (bact:AROF_ECOLI) or (bact:AROG_ECOLI) or (bact:AROH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0f315e3d-1e42-427b-b604-94abda332d9e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97218"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.54"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/14717"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/14718"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/14719"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/14720"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DDPA"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DDPAm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DPHS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DDPA"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DDPAm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DPHS"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01826"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:DAHPSYN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1910"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_AROF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_AROG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_AROH_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM258__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1219__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2FC932DD" metaid="_4a4411fc-95a0-4271-93bf-2635fd3ef463" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_LEUabcpp</html:p><html:p>REACTION: MNXR101054</html:p><html:p>XREFS: rhea:29807#1;rhea:29808#1;rhea:29809#1;rhea:29810#1;bigg:LEUabc;bigg:LEUabcpp;bigg:R_LEUabc;bigg:R_LEUabcpp;metacyc:ABC-35-RXN;seed:rxn05161;seed:rxn08784</html:p><html:p>GENE ASSOCIATION: (bact:LIVF_ECOLI and bact:LIVG_ECOLI and bact:LIVH_ECOLI and bact:LIVJ_ECOLI and bact:LIVM_ECOLI) or (bact:LIVF_ECOLI and bact:LIVG_ECOLI and bact:LIVH_ECOLI and bact:LIVK_ECOLI and bact:LIVM_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - 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</annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_LIVF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVM_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_LIVF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVK_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVM_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM140__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM140__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R2FD92936" metaid="_713100a3-9945-4113-b480-434342802397" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PRASCSi</html:p><html:p>REACTION: MNXR108987</html:p><html:p>CLASSIFICATION: 6.3.2.6</html:p><html:p>PATHWAYS: kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Metabolic pathways;kegg:Purine metabolism;metacyc:inosine-5'-phosphate biosynthesis I;metacyc:inosine-5'-phosphate biosynthesis 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rdf:resource="http://identifiers.org/rhea/22631"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRAISh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PRASCSi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PRAISh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PRASCSi"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04591"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SAICARSYN-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PUR7_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM42__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM507__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM607__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R2FE5051D" metaid="_14f7afc3-e20f-4577-b8c5-34195c4358a2" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARGORNt7pp</html:p><html:p>REACTION: MNXR95946</html:p><html:p>XREFS: rhea:34991;rhea:34992;rhea:34993;rhea:34994;bigg:ARGORNt7;bigg:ARGORNt7pp;bigg:ORNtm;bigg:R_ARGORNt7;bigg:R_ARGORNt7pp;bigg:R_ORNtm;deprecated:MNXR30738;seed:rxn08153;seed:rxn10131</html:p><html:p>GENE ASSOCIATION: (bact:ARCD_ECOLI)</html:p><html:p>PROP 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rdf:resource="http://identifiers.org/bigg.reaction/R_ARGORNt7pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ORNtm"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ARCD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM70__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89689__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM70__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89689__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R3017D7AC" metaid="_0a21ae5b-c845-4fab-888b-92e2d98799a5" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FEOXAMabcpp</html:p><html:p>REACTION: MNXR134972</html:p><html:p>XREFS: bigg:FEOXAMabcpp;bigg:R_FEOXAMabcpp;deprecated:MNXR55422;deprecated:MNXR68991;deprecated:MNXR99556;seed:rxn05558;seed:rxn08509</html:p><html:p>GENE ASSOCIATION: (bact:FHUB_ECOLI and bact:FHUC_ECOLI and bact:FHUD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0a21ae5b-c845-4fab-888b-92e2d98799a5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR134972"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FEOXAMabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FHUB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FHUC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FHUD_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM53317__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM53317__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - 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species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1275__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R31BED21_1" metaid="_3be184b7-1d5d-4b5f-8168-79f036071d32" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CYTDt2pp_copy1;R_CYTDt2pp_copy2</html:p><html:p>REACTION: MNXR97044</html:p><html:p>XREFS: rhea:29983;rhea:29984;rhea:29985;rhea:29986;bigg:CYTDt2;bigg:CYTDt2pp;bigg:R_CYTDt2;bigg:R_CYTDt2pp;deprecated:MNXR1379;metacyc:TRANS-RXN-108B;seed:rxn05198;seed:rxn08289</html:p><html:p>GENE ASSOCIATION: (bact:NUPC_ECOLI) or 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rdf:resource="http://identifiers.org/bigg.reaction/R_ETOHtrpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ETOHtx"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-546"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM303__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM303__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R33E77D06" metaid="a4bd12df-a884-4b73-9f83-a27b4eb14237" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_cu2_e</html:p><html:p>REACTION: MNXR98384</html:p><html:p>XREFS: bigg:EX_cu2_e;bigg:R_EX_cu2_e</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a4bd12df-a884-4b73-9f83-a27b4eb14237"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98384"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cu2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_cu2_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM632__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R33EA5572" metaid="dd922e4b-3784-4ad8-9149-5e936527fece" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PGPP180pp</html:p><html:p>REACTION: MNXR102566</html:p><html:p>CLASSIFICATION: 3.1.3.27</html:p><html:p>XREFS: bigg:PGPP180;bigg:PGPP180pp;bigg:R_PGPP180;bigg:R_PGPP180pp;deprecated:MNXR4210;deprecated:MNXR69686;seed:rxn09106</html:p><html:p>GENE ASSOCIATION: (bact:PGPA_ECOLI) or (bact:PGPB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#dd922e4b-3784-4ad8-9149-5e936527fece"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102566"/> - 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rdf:resource="http://identifiers.org/bigg.reaction/R_NTPP7"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R11323"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5107"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/10421"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_MAZG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUDI_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM394__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM257__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R341F7813" metaid="_1046aa38-be12-42c0-8a4e-c3ce2400e4fc" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_UMPtex</html:p><html:p>REACTION: MNXR105127</html:p><html:p>XREFS: rhea:27926;rhea:27927;rhea:27928;rhea:27929;bigg:R_UMPtex;bigg:R_UMPth;bigg:R_UMPtn;bigg:R_UMPtr;bigg:UMPtex;bigg:UMPth;bigg:UMPtn;bigg:UMPtr;deprecated:MNXR5279;deprecated:MNXR84394;seed:rxn09361;seed:rxn09808</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DAGK140</html:p><html:p>REACTION: MNXR97092</html:p><html:p>XREFS: bigg:DAGK140;bigg:R_DAGK140;deprecated:MNXR1411;deprecated:MNXR82116</html:p><html:p>GENE ASSOCIATION: (bact:KDGL_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ed2b6a88-ea03-498d-a3d3-ede679940d80"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97092"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAGK140"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DAGK140"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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bigg:DAPtex;bigg:R_DAPtex;deprecated:MNXR1434;seed:rxn08305</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_37f079be-65ef-4821-9c1a-7811cb326148"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97147"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DAPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DAPtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - 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reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_METDtex</html:p><html:p>REACTION: MNXR101473</html:p><html:p>XREFS: rhea:34911;rhea:34912;rhea:34913;rhea:34914;bigg:METDtex;bigg:R_METDtex;deprecated:MNXR3490;seed:rxn08911</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bac9570b-19eb-4b6b-967b-2c183fe14f21"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101473"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34911"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34912"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34913"/> - <rdf:li 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id="R369C3C00" metaid="_16c35508-985f-410f-a376-a51ca583b776" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ALAGLUE</html:p><html:p>REACTION: MNXR95690</html:p><html:p>CLASSIFICATION: 5.1.1.20</html:p><html:p>PATHWAYS: metacyc:muropeptide degradation</html:p><html:p>XREFS: rhea:28394;rhea:28395;rhea:28396;rhea:28397;bigg:ALAGLUE;bigg:R_ALAGLUE;deprecated:MNXR24231;deprecated:MNXR55020;kegg:R10938;metacyc:RXN0-5228;sabiork:7810;seed:rxn08100</html:p><html:p>GENE ASSOCIATION: (bact:AEEP_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_16c35508-985f-410f-a376-a51ca583b776"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95690"/> - <rdf:li 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species="MNXM3630__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM4026__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R36C11FB5" metaid="b73f7a2a-af5c-4093-90a3-4bf4c1c961d6" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GUAPRT</html:p><html:p>REACTION: MNXR100409</html:p><html:p>CLASSIFICATION: 2.4.2.22;2.4.2.7;2.4.2.8</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Purine metabolism;metacyc:guanine and guanosine salvage;metacyc:guanine and guanosine salvage 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<rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDHC_nadp_hr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ME2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ME2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MDHC_nadp_hr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ME2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ME2m"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00216"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MALIC-NADP-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/142"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MAO2_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM98__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R377E607A" metaid="a28b3122-0cc5-423e-865f-00a5e86f3119" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ACSERtpp</html:p><html:p>REACTION: MNXR95416</html:p><html:p>XREFS: rhea:29659;rhea:29660;rhea:29661;rhea:29662;bigg:ACSERtex;bigg:ACSERthi;bigg:ACSERtmi;bigg:ACSERtpp;bigg:R_ACSERtex;bigg:R_ACSERthi;bigg:R_ACSERtmi;bigg:R_ACSERtpp;deprecated:MNXR454;metacyc:RXN0-1923;seed:rxn08059;seed:rxn08060</html:p><html:p>GENE ASSOCIATION: (bact:EAMA_ECOLI) or 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rdf:resource="http://identifiers.org/bigg.reaction/R_ACSERtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACSERthi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACSERtmi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACSERtpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-1923"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_EAMA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_EAMB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM418__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM418__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R377E8F96" metaid="bb7dd768-ce59-4646-885b-87a5d944e34e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ASPO4</html:p><html:p>REACTION: MNXR96092</html:p><html:p>XREFS: rhea:29191;rhea:29192;rhea:29193;rhea:29194;bigg:ASPO4;bigg:ASPO4_1;bigg:R_ASPO4;bigg:R_ASPO4_1;deprecated:MNXR55083;deprecated:MNXR65519;deprecated:MNXR81765;seed:rxn08167</html:p><html:p>GENE ASSOCIATION: (bact:NADB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bb7dd768-ce59-4646-885b-87a5d944e34e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96092"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29191"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29192"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29193"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29194"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPO4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPO4_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASPO4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASPO4_1"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_NADB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM42__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM509__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM223__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM599__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R37889482" metaid="c8dac008-2361-44b6-9bfd-fc2c2765f3eb" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GALCTtex</html:p><html:p>REACTION: MNXR99963</html:p><html:p>XREFS: rhea:28478;rhea:28479;rhea:28480;rhea:28481;bigg:GALCTtex;bigg:R_GALCTtex;deprecated:MNXR2506;metacyc:TRANS-RXN0-203;seed:rxn08581;seed:rxn12441</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d3d03a34-8466-4a29-a658-5a2b612d9654"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101742"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MSO3tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MSO3tex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1485__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1485__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R37B1A3D7" metaid="ae175f2c-3d39-4ccd-8fdd-3f36d356c4d0" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_42A12BOOXpp</html:p><html:p>REACTION: MNXR94989</html:p><html:p>CLASSIFICATION: 1.4.3.21;1.4.3.4;1.4.9.2;1.4.99.4</html:p><html:p>PATHWAYS: kegg:Biosynthesis of secondary metabolites;kegg:Isoquinoline alkaloid biosynthesis;kegg:Metabolic pathways;kegg:Tyrosine metabolism;metacyc:aromatic biogenic amine degradation (bacteria);metacyc:dopamine degradation</html:p><html:p>XREFS: rhea:27946;rhea:27947;rhea:27948;rhea:27949;bigg:42A12BOOX;bigg:42A12BOOXpp;bigg:R_42A12BOOX;bigg:R_42A12BOOXpp;deprecated:MNXR222;deprecated:MNXR66186;deprecated:MNXR81393;kegg:R04300;metacyc:RXN6666-4;sabiork:4000;seed:rxn02993</html:p><html:p>GENE 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rdf:resource="http://identifiers.org/bigg.reaction/42A12BOOX"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/42A12BOOXpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_42A12BOOX"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_42A12BOOXpp"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04300"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN6666-4"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/4000"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_AMO_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM205__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1401__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM15__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM22__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R37C1553C" metaid="_8347ec6c-3df3-4074-986a-121affab1c75" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_L_LACtex</html:p><html:p>REACTION: MNXR100999</html:p><html:p>XREFS: rhea:34987;rhea:34988;rhea:34989;rhea:34990;bigg:LACLt;bigg:L_LACtcm;bigg:L_LACtex;bigg:R_LACLt;bigg:R_L_LACtcm;bigg:R_L_LACtex;sabiork:10553;seed:rxn08795;seed:rxn11016</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: 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rdf:resource="http://identifiers.org/bigg.reaction/R_L_LACtcm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_L_LACtex"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/10553"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM179__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM179__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" 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constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM88341__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM88346__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R39AD2641" metaid="d492282b-efab-4e78-9c68-eb98089a6e0a" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NO3R1bpp</html:p><html:p>REACTION: MNXR101987</html:p><html:p>XREFS: rhea:29123;rhea:29124;rhea:29125;rhea:29126;bigg:NO3R1bpp;bigg:R_NO3R1bpp;deprecated:MNXR55772;deprecated:MNXR83460;seed:rxn09000</html:p><html:p>GENE ASSOCIATION: (bact:NAPA_ECOLI and bact:NAPB_ECOLI and bact:NAPC_ECOLI and bact:NAPG_ECOLI and bact:NAPH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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fbc:upperFluxBound="B_999999" id="R39DA2651" metaid="d62d0675-0804-43cf-8c14-27e13ccf1b20" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_INDOLEtex</html:p><html:p>REACTION: MNXR100836</html:p><html:p>XREFS: bigg:INDOLEtex;bigg:R_INDOLEtex;deprecated:MNXR3105;metacyc:TRANS-RXN0-563;seed:rxn08751</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d62d0675-0804-43cf-8c14-27e13ccf1b20"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100836"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/INDOLEtex"/> - <rdf:li 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metaid="fd146764-fafa-4f5e-a318-1e505893dea1" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MNLptspp</html:p><html:p>REACTION: MNXR101677</html:p><html:p>XREFS: bigg:MNLpts;bigg:MNLptspp;bigg:R_MNLpts;bigg:R_MNLptspp;deprecated:MNXR55729;seed:rxn05617;seed:rxn08949;seed:rxn13934;seed:rxn13944</html:p><html:p>GENE ASSOCIATION: (bact:PT1_ECOLI and bact:PTHP_ECOLI and bact:PTM3C_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#fd146764-fafa-4f5e-a318-1e505893dea1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101677"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MNLpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MNLptspp"/> - <rdf:li 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fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R3A2717BD" metaid="dd776fe4-9ebb-4dc3-be70-b0f1d4120539" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LADGMDH</html:p><html:p>REACTION: MNXR101002</html:p><html:p>XREFS: bigg:LADGMDH;bigg:R_LADGMDH;deprecated:MNXR50965;deprecated:MNXR69306;seed:rxn08773</html:p><html:p>GENE ASSOCIATION: (bact:MPAA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#dd776fe4-9ebb-4dc3-be70-b0f1d4120539"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101002"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LADGMDH"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LADGMDH"/> - </rdf:Bag> - </bqbiol:is> - 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<fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM76__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM76__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R3B124245" metaid="cf341ecd-41ce-4fc8-a6e4-c638d3877347" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GLYCLTtex</html:p><html:p>REACTION: MNXR100333</html:p><html:p>XREFS: 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species="MNXM163784__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R3DE71939" metaid="_04659ce1-14e6-45be-850c-cff66a6a64cf" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MALTabcpp</html:p><html:p>REACTION: MNXR101362</html:p><html:p>CLASSIFICATION: 3.6.3.19</html:p><html:p>XREFS: rhea:22132#1;rhea:22133#1;rhea:22134#1;rhea:22135#1;bigg:MALTabc;bigg:MALTabcpp;bigg:R_MALTabc;bigg:R_MALTabcpp;metacyc:3.6.3.19-RXN;metacyc:ABC-16-RXN;sabiork:12365#2;seed:rxn05170;seed:rxn08867</html:p><html:p>GENE ASSOCIATION: (bact:MALE_ECOLI and bact:MALF_ECOLI and bact:MALG_ECOLI and bact:MALK_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96056"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.1"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.38"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.4"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21016"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21017"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21018"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21019"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNN"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNNe"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNNm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASNNpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPSE"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASNN"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASNNe"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASNNm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASNNpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASPSE"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00485"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ASPARAGHYD-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-6797627"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/917"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_ASPG1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_IAAA_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM147__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM15__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM42__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R3E0E325F_1" metaid="a2de14fe-3181-4a4c-b1bf-b207e4f7fbbd" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_THMDt2pp</html:p><html:p>REACTION: MNXR104818</html:p><html:p>XREFS: rhea:29955;rhea:29956;rhea:29957;rhea:29958;bigg:R_THMDt2;bigg:R_THMDt2pp;bigg:THMDt2;bigg:THMDt2pp;deprecated:MNXR5042;metacyc:TRANS-RXN-108H;seed:rxn05200;seed:rxn09298</html:p><html:p>GENE ASSOCIATION: (bact:NUPC_ECOLI) or (bact:NUPG_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/bigg.reaction/R_THMDt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THMDt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/THMDt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108H"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_XAPB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM420__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM420__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R3E15D408" metaid="_98e99db1-bd85-48c3-ae7f-92d401d3a916" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_pro__L_e</html:p><html:p>REACTION: MNXR98866</html:p><html:p>XREFS: bigg:EX_pro__L_e;bigg:R_EX_pro__L_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_98e99db1-bd85-48c3-ae7f-92d401d3a916"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98866"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pro__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_pro__L_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - 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- <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ZNTA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2646__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2646__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4010E30A" metaid="_6f0a35f0-df1f-415b-a1ef-3b3c89d5ffa0" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DSERt2pp</html:p><html:p>REACTION: MNXR97798</html:p><html:p>XREFS: bigg:DSERt2;bigg:DSERt2pp;bigg:R_DSERt2;bigg:R_DSERt2pp;deprecated:MNXR1803;metacyc:RXN0-5130;seed:rxn05649;seed:rxn08372</html:p><html:p>GENE ASSOCIATION: (bact:CYCA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6f0a35f0-df1f-415b-a1ef-3b3c89d5ffa0"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97798"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSERt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DSERt2pp"/> - <rdf:li 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species="MNXM83974__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89612__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R407950EC" metaid="a1231bdc-d806-481b-a534-81321c38e8ca" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ACSERtex</html:p><html:p>REACTION: MNXR95416</html:p><html:p>XREFS: rhea:29659;rhea:29660;rhea:29661;rhea:29662;bigg:ACSERtex;bigg:ACSERthi;bigg:ACSERtmi;bigg:ACSERtpp;bigg:R_ACSERtex;bigg:R_ACSERthi;bigg:R_ACSERtmi;bigg:R_ACSERtpp;deprecated:MNXR454;metacyc:RXN0-1923;seed:rxn08059;seed:rxn08060</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/reactome/R-HSA-77319"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-77319"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-77319"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-77319"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-77319"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-77319"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1412"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FADE_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM233__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" 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reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_LYSt2pp</html:p><html:p>REACTION: MNXR101266</html:p><html:p>XREFS: rhea:28911;rhea:28912;rhea:28913;rhea:28914;bigg:LYSt2m;bigg:LYSt2pp;bigg:LYSt2r;bigg:R_LYSt2m;bigg:R_LYSt2pp;bigg:R_LYSt2r;deprecated:MNXR3355;metacyc:TRANS-RXN-58;seed:rxn08854;seed:rxn09674;seed:rxn09740</html:p><html:p>GENE ASSOCIATION: (bact:LYSP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5e1169d9-b443-43b0-9aeb-86082c04c2a6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101266"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28911"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28912"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28913"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28914"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LYSt2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LYSt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LYSt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LYSt2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LYSt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LYSt2r"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-58"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LYSP_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM78__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM78__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4A167AA5" metaid="ac24a12d-47bd-44cf-9d0d-a8e5fd9f926f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CYSTL</html:p><html:p>REACTION: MNXR138161</html:p><html:p>CLASSIFICATION: 4.4.1.8</html:p><html:p>PATHWAYS: kegg:Biosynthesis of amino acids;kegg:Biosynthesis of secondary metabolites;kegg:Cysteine and methionine metabolism;kegg:Metabolic pathways</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/rhea/13968"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSTL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSTLp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CBL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYSTL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYSTLp"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01286"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1501"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_MALY_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_METC_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM319__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM114070__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM15__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R4A72BCD7" metaid="_1982d126-44bd-4824-b45b-a8b4718c3ea6" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_METSOX1tex</html:p><html:p>REACTION: MNXR101483</html:p><html:p>XREFS: bigg:METSOX1tex;bigg:R_METSOX1tex;deprecated:MNXR3497;seed:rxn08915</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1982d126-44bd-4824-b45b-a8b4718c3ea6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101483"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METSOX1tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_METSOX1tex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2246__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2246__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4A881FA5" metaid="c0b609b7-1acb-4dcd-ba0f-496f2fa05d5d" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_tyr__L_e</html:p><html:p>REACTION: MNXR99005</html:p><html:p>XREFS: bigg:EX_tyr__L_e;bigg:R_EX_tyr__L_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c0b609b7-1acb-4dcd-ba0f-496f2fa05d5d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99005"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_tyr__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_tyr__L_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM76__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4AB610A3" metaid="_3a625edb-06be-4460-b0c3-889d6e6e2b96" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AKGDH</html:p><html:p>REACTION: MNXR95655</html:p><html:p>CLASSIFICATION: 1.2.1.52;1.2.4.2;1.8.1.4;2.3.1.61</html:p><html:p>PATHWAYS: kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Carbon metabolism;kegg:Metabolic pathways;metacyc:TCA cycle I (prokaryotic);metacyc:TCA cycle II (plants and fungi);metacyc:TCA cycle VII (acetate-producers)</html:p><html:p>XREFS: rhea:27786;rhea:27787;rhea:27788;rhea:27789;bigg:AKGDH;bigg:AKGDm;bigg:R_AKGDH;bigg:R_AKGDm;deprecated:MNXR595;deprecated:MNXR61625;deprecated:MNXR91112;kegg:R08549;metacyc:2OXOGLUTARATEDEH-RXN;reactome:R-ATH-71401;reactome:R-BTA-71401;reactome:R-CEL-71401;reactome:R-CFA-71401;reactome:R-DDI-71401;reactome:R-DME-71401;reactome:R-DRE-71401;reactome:R-GGA-373042;reactome:R-GGA-71401;reactome:R-HSA-71401;reactome:R-MMU-71401;reactome:R-OSA-71401;reactome:R-PFA-71401;reactome:R-RNO-71401;reactome:R-SCE-71401;reactome:R-SPO-71401;reactome:R-SSC-71401;reactome:R-TGU-71401;reactome:R-XTR-71401;sabiork:8163;seed:rxn08094</html:p><html:p>GENE ASSOCIATION: (bact:DLDH_ECOLI and bact:ODO1_ECOLI and bact:ODO2_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3a625edb-06be-4460-b0c3-889d6e6e2b96"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95655"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.52"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.4.2"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.4"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.61"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27786"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27787"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27788"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27789"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGDH"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGDm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AKGDH"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AKGDm"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08549"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2OXOGLUTARATEDEH-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-373042"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-PFA-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-71401"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-71401"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/8163"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_DLDH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ODO1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ODO2_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM20__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM92__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4AC4DC79" metaid="_9624db4d-b805-4c1a-8542-f7ab224561e1" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MMCD</html:p><html:p>REACTION: MNXR101656</html:p><html:p>CLASSIFICATION: 4.1.1.41;4.1.1.9</html:p><html:p>PATHWAYS: kegg:Propanoate 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species="MNXM156__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4C124CD3" metaid="_8c7c5601-233a-446d-b055-319c465f79ae" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GTHRDabc2pp</html:p><html:p>REACTION: MNXR100447</html:p><html:p>XREFS: rhea:29787#1;rhea:29788#1;rhea:29789#1;rhea:29790#1;rhea:29791#2;rhea:29792#2;rhea:29793#2;rhea:29794#2;bigg:GTHRDabc2pp;bigg:GTHRDt;bigg:R_GTHRDabc2pp;bigg:R_GTHRDt;bigg:R_r1530;bigg:r1530;deprecated:MNXR30137;deprecated:MNXR83074;metacyc:RXN0-21;seed:rxn08675;seed:rxn13712</html:p><html:p>GENE ASSOCIATION: (bact:CYDC_ECOLI and bact:CYDD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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rdf:resource="http://identifiers.org/bigg.reaction/R_r1530"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r1530"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-21"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CYDC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CYDD_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM57__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM57__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4C3800D5" metaid="_92751658-4f1b-401c-b9a6-81e82bcc447e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FADRx</html:p><html:p>REACTION: MNXR99215</html:p><html:p>CLASSIFICATION: 1.5.1.36;1.5.1.37;1.5.1.45</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Riboflavin metabolism</html:p><html:p>XREFS: rhea:30147;rhea:30148;rhea:30149;rhea:30150;bigg:FADRx;bigg:R_FADRx;deprecated:MNXR55357;deprecated:MNXR68874;deprecated:MNXR82717;kegg:R09748;metacyc:RXN-8506;sabiork:7290;seed:rxn08458</html:p><html:p>GENE ASSOCIATION: (bact:FRE_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_92751658-4f1b-401c-b9a6-81e82bcc447e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99215"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.36"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.37"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.45"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30147"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30148"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30149"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30150"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FADRx"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FADRx"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09748"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-8506"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7290"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FRE_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM33__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM38__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4C3B7A28" metaid="_2cfc1e24-417e-4992-94a4-17732a9f1471" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PROTRS</html:p><html:p>REACTION: MNXR103208</html:p><html:p>CLASSIFICATION: 6.1.1.15</html:p><html:p>PATHWAYS: kegg:Aminoacyl-tRNA biosynthesis</html:p><html:p>XREFS: bigg:PROTRS;bigg:R_PROTRS;deprecated:MNXR91624;kegg:R03661;reactome:R-HSA-379865;reactome:R-HSA-380198;sabiork:404;seed:rxn06445</html:p><html:p>GENE ASSOCIATION: (bact:SYP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2cfc1e24-417e-4992-94a4-17732a9f1471"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103208"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.15"/> - <rdf:li 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<speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM247__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4C83430" metaid="_14182f21-cda4-44c3-a7aa-8f050c93bdd1" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_adn_e</html:p><html:p>REACTION: MNXR98230</html:p><html:p>XREFS: bigg:EX_adn_e;bigg:R_EX_adn_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_14182f21-cda4-44c3-a7aa-8f050c93bdd1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98230"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_adn_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_adn_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM212__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4CA6511B" metaid="_39fc1d54-73f4-4f76-b7e4-d3c1ef8cc595" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CSND</html:p><html:p>REACTION: MNXR96927</html:p><html:p>CLASSIFICATION: 3.5.4.1</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Pyrimidine metabolism;metacyc:pyrimidine nucleobases salvage II;metacyc:pyrimidine ribonucleosides salvage III;seed:pyrimidine_conversions;seed:pyrimidine_conversions/CMP_to_Uracil;seed:pyrimidine_conversions/CTP_to_CMP;seed:pyrimidine_conversions/UMP_to_UTP;seed:pyrimidine_conversions/UMP_to_Uracil;seed:pyrimidine_conversions/UTP_to_CTP;seed:pyrimidine_conversions/dCMP_to_dTMP;seed:pyrimidine_conversions/dCTP_to_dCMP;seed:pyrimidine_conversions/dTMP_to_Thymine;seed:pyrimidine_conversions/dTMP_to_dTTP</html:p><html:p>XREFS: rhea:20605;rhea:20606;rhea:20607;rhea:20608;bigg:CSND;bigg:R_CSND;deprecated:MNXR1306;deprecated:MNXR82063;kegg:R00974;metacyc:CYTDEAM-RXN;seed:rxn00717</html:p><html:p>GENE ASSOCIATION: (bact:CODA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_39fc1d54-73f4-4f76-b7e4-d3c1ef8cc595"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96927"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20605"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20606"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20607"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20608"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CSND"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CSND"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00974"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CYTDEAM-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_CODA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM761__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM15__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM158__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4CC5E37" metaid="_9a9c4dad-a946-407a-b7c3-a0d60bf4b965" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DSBAO2</html:p><html:p>REACTION: MNXR97792</html:p><html:p>XREFS: bigg:DSBAO2;bigg:R_DSBAO2;deprecated:MNXR50872;deprecated:MNXR54873;deprecated:MNXR68762;deprecated:MNXR80361;seed:rxn08367</html:p><html:p>GENE ASSOCIATION: (bact:DSBA_ECOLI and bact:DSBB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: 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species="MNXM509__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM223__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM97004__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R4CD56B41" metaid="_1c89e986-fc8b-4bda-9a5f-1167474fffdb" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_EAR180x</html:p><html:p>REACTION: MNXR97859</html:p><html:p>CLASSIFICATION: 1.3.1.9</html:p><html:p>XREFS: bigg:EAR180x;bigg:EAR180x_1;bigg:R_EAR180x;bigg:R_EAR180x_1;deprecated:MNXR31140</html:p><html:p>GENE ASSOCIATION: (bact:FABI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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</listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R51C8EC34" metaid="_663fafb8-0e3b-4659-861a-09df6f857189" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_uri_e</html:p><html:p>REACTION: MNXR99026</html:p><html:p>XREFS: bigg:EX_uri_e;bigg:R_EX_uri_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_663fafb8-0e3b-4659-861a-09df6f857189"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99026"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_uri_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_uri_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM288__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R521C310F" metaid="bb86b999-e513-4ae2-9e55-a3f811ef2a4a" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GLNabcpp</html:p><html:p>REACTION: MNXR100258</html:p><html:p>CLASSIFICATION: 3.6.3.21</html:p><html:p>XREFS: rhea:29895#1;rhea:29896#1;rhea:29897#1;rhea:29898#1;bigg:GLNabc;bigg:GLNabcpp;bigg:R_GLNabc;bigg:R_GLNabcpp;deprecated:MNXR27593;deprecated:MNXR28966;deprecated:MNXR29064;metacyc:ABC-12-RXN;seed:rxn05155;seed:rxn05196;seed:rxn08624;seed:rxn11101;seed:rxn11233</html:p><html:p>GENE ASSOCIATION: (bact:GLNH_ECOLI and bact:GLNP_ECOLI and bact:GLNQ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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- </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLNH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_GLNP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_GLNQ_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM37__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM37__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5228B7DE" metaid="c70efebc-37bc-4a7b-b0bb-85c9dfcae9e5" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FEOXAMR1</html:p><html:p>REACTION: MNXR135818</html:p><html:p>XREFS: bigg:FEOXAMR1;bigg:R_FEOXAMR1;deprecated:MNXR55420;deprecated:MNXR68987;deprecated:MNXR82843;deprecated:MNXR99551;seed:rxn08511</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c70efebc-37bc-4a7b-b0bb-85c9dfcae9e5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR135818"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMR1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FEOXAMR1"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="5"/> - <speciesReference constant="true" species="MNXM38__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM53317__64__MNXC3" stoichiometry="2"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM111__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM33__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90827__64__MNXC3" stoichiometry="2"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R52301C37" metaid="a946d445-f9ec-4818-bdda-077b8418e8f6" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLYOX</html:p><html:p>REACTION: MNXR100353</html:p><html:p>CLASSIFICATION: 3.1.2.6</html:p><html:p>PATHWAYS: kegg:Pyruvate metabolism;metacyc:methylglyoxal degradation I;seed:Methylglyoxal_Metabolism;seed:Methylglyoxal_Metabolism/GlyceroneP_to_Methylglyoxal;seed:Methylglyoxal_Metabolism/Methylglyoxal_to_Lactate</html:p><html:p>XREFS: rhea:25245;rhea:25246;rhea:25247;rhea:25248;bigg:GLYOX;bigg:GLYOXm;bigg:R_GLYOX;bigg:R_GLYOXm;deprecated:MNXR2772;deprecated:MNXR83039;kegg:R01736;metacyc:GLYOXII-RXN;sabiork:283;seed:rxn01274</html:p><html:p>GENE ASSOCIATION: (bact:GLO2_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a946d445-f9ec-4818-bdda-077b8418e8f6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100353"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.6"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25245"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25246"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25247"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/25248"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYOX"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYOXm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYOX"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYOXm"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01736"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLYOXII-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/283"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GLO2_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1253__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM285__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM57__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R523859D8" metaid="ad8dbd08-8baf-4a17-9078-1fb732118a1b" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLYCTO3</html:p><html:p>REACTION: MNXR100340</html:p><html:p>XREFS: bigg:GLYCTO3;bigg:R_GLYCTO3;deprecated:MNXR50948;deprecated:MNXR69173;seed:rxn08656</html:p><html:p>GENE ASSOCIATION: (bact:GLCD_ECOLI and 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</fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM222__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM509__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM223__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM69__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R524962D5" metaid="fbc27b1d-5d4f-42b0-9ad8-ca3ecb2b55e4" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FECRMUtex</html:p><html:p>REACTION: MNXR99533</html:p><html:p>XREFS: bigg:FECRMUtex;bigg:R_FECRMUtex;deprecated:MNXR2232;deprecated:MNXR68979;seed:rxn08499</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R525AE5C5" metaid="_786df526-a34c-4471-9a60-3e3ab16cab4b" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NTPP6</html:p><html:p>REACTION: MNXR102054</html:p><html:p>CLASSIFICATION: 3.6.1.8;3.6.1.9</html:p><html:p>PATHWAYS: kegg:Purine metabolism;seed:Purine_conversions;seed:Purine_conversions/AMP_to_ADP;seed:Purine_conversions/Adenine_to_AMP;seed:Purine_conversions/GDP_to_GTP;seed:Purine_conversions/GMP_to_GDP;seed:Purine_conversions/IMP_to_AMP;seed:Purine_conversions/IMP_to_GMP;seed:Purine_conversions/IMP_to_Hypoxanthine;seed:Purine_conversions/dADP_to_dAMP;seed:Purine_conversions/dGDP_to_dGMP</html:p><html:p>XREFS: rhea:14245;rhea:14246;rhea:14247;rhea:14248;bigg:NTPP6;bigg:R_NTPP6;deprecated:MNXR3901;deprecated:MNXR79946;kegg:R00087;metacyc:ATP-PYROPHOSPHATASE-RXN;sabiork:245;seed:rxn00063;seed:rxn05822</html:p><html:p>GENE ASSOCIATION: (bact:MAZG_ECOLI)</html:p><html:p>PROP BC-b: 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90960__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R528CD29B" metaid="_3042cdbf-1e56-4ef4-9901-1a94fcd34393" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PHETRS</html:p><html:p>REACTION: MNXR102634</html:p><html:p>CLASSIFICATION: 6.1.1.20</html:p><html:p>PATHWAYS: kegg:Aminoacyl-tRNA biosynthesis</html:p><html:p>XREFS: bigg:PHETRS;bigg:PHETRSm;bigg:R_PHETRS;bigg:R_PHETRSm;deprecated:MNXR83664;deprecated:MNXR91621;kegg:R03660;reactome:R-HSA-379848;reactome:R-HSA-380203;sabiork:409;seed:rxn06444</html:p><html:p>GENE ASSOCIATION: (bact:SYFA_ECOLI and bact:SYFB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/rhea/13725"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13726"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13727"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13728"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05332"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.3.1.157-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GLMU_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM21__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM969__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM340__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R52F4C04F" metaid="_34371c7e-6f50-4e30-a027-9cb795d88e5c" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NI2tex</html:p><html:p>REACTION: MNXR135902</html:p><html:p>XREFS: bigg:NI2tex;bigg:NI2tpp;bigg:NIt5;bigg:R_NI2tex;bigg:R_NI2tpp;bigg:R_NIt5;deprecated:MNXR3820</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_34371c7e-6f50-4e30-a027-9cb795d88e5c"> - 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reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ILEt2rpp</html:p><html:p>REACTION: MNXR100822</html:p><html:p>XREFS: bigg:ILEt2r;bigg:ILEt2rpp;bigg:ILEt7;bigg:ILEth;bigg:ILEtm;bigg:R_ILEt2r;bigg:R_ILEt2rpp;bigg:R_ILEt7;bigg:R_ILEth;bigg:R_ILEtm;deprecated:MNXR3095;seed:rxn05244;seed:rxn08746;seed:rxn13322</html:p><html:p>GENE ASSOCIATION: (bact:BRNQ_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_498dcb61-54b2-4cd8-8aeb-1b57b1d9b159"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100822"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEt2rpp"/> - <rdf:li 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rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97025"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29783#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29784#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29785#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29786#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32795#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32796#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32797#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32798#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYSabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYSabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYSabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-265"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM55__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM55__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R58EA73BC" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA2E161pp</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM71458__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM162245__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6601__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5902ECCD" metaid="_5736d6da-5956-4199-a7aa-7f2cc9e5c9d9" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_2AGPA161tipp</html:p><html:p>REACTION: MNXR94747</html:p><html:p>XREFS: bigg:2AGPA161tipp;bigg:R_2AGPA161tipp;deprecated:MNXR52;seed:rxn07936</html:p><html:p>GENE ASSOCIATION: (bact:LPLT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5736d6da-5956-4199-a7aa-7f2cc9e5c9d9"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94747"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPA161tipp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_2AGPA161tipp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_767bcb53-5b38-4359-a8c0-7864a5c8bc70"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102516"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG120abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PG120abcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MSBA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1771__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1771__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R595721B9" metaid="b3c558e2-898a-4017-8b5b-ddab5b28f53f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA2A141pp</html:p><html:p>REACTION: MNXR102991</html:p><html:p>CLASSIFICATION: 3.1.1.4</html:p><html:p>XREFS: bigg:PLIPA2A141pp;bigg:R_PLIPA2A141pp;deprecated:MNXR51033</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b3c558e2-898a-4017-8b5b-ddab5b28f53f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102991"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2A141pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PLIPA2A141pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90512__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - 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xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c66ecf4e-eb7c-4480-9acc-2f9cc0ea2ab1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98854"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pi_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_pi_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM9__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5979C9DD" metaid="_01d089f0-55bd-4c2a-8551-c5342c0ce7cf" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CLPNH180pp</html:p><html:p>REACTION: MNXR96779</html:p><html:p>XREFS: bigg:CLPNH180pp;bigg:R_CLPNH180pp;deprecated:MNXR1202</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_01d089f0-55bd-4c2a-8551-c5342c0ce7cf"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96779"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH180pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CLPNH180pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5079__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM51279__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM75102__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R597C961C" metaid="a443150f-3ff6-482f-98db-2281a1c491cf" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_halipa_e</html:p><html:p>REACTION: MNXR98647</html:p><html:p>XREFS: bigg:EX_halipa_e;bigg:R_EX_halipa_e;deprecated:MNXR82562</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a443150f-3ff6-482f-98db-2281a1c491cf"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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rdf:resource="http://identifiers.org/bigg.reaction/r1109"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00362"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CITLY-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CILA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CITD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CITE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CITX_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM131__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM26__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM46__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5D2D87DD" metaid="_2da6f59b-0cf6-4a97-9a73-8f987cb08a21" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AGM4PApp</html:p><html:p>REACTION: MNXR95546</html:p><html:p>XREFS: bigg:AGM4PA;bigg:AGM4PApp;bigg:R_AGM4PA;bigg:R_AGM4PApp;deprecated:MNXR552;deprecated:MNXR68306;seed:rxn08076</html:p><html:p>GENE ASSOCIATION: (bact:AMIA_ECOLI) or (bact:AMIB_ECOLI) or (bact:AMIC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2da6f59b-0cf6-4a97-9a73-8f987cb08a21"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95546"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AGM4PA"/> - 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stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5D7A11E" metaid="b9d490b0-f9fb-42bf-ab51-29a262eeca2b" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DMSOR2pp</html:p><html:p>REACTION: MNXR97532</html:p><html:p>XREFS: bigg:DMSOR2e;bigg:DMSOR2pp;bigg:R_DMSOR2e;bigg:R_DMSOR2pp;deprecated:MNXR135776;seed:rxn08357;seed:rxn10130</html:p><html:p>GENE ASSOCIATION: (bact:TORY_ECOLI and bact:TORZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b9d490b0-f9fb-42bf-ab51-29a262eeca2b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97532"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMSOR2e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMSOR2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DMSOR2e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DMSOR2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_TORY_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TORZ_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM558__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM745__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2178__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM444__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5D8F4FD2" metaid="_9b9a9202-f8c1-47e7-81aa-54ee0b8b06ab" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_THRTRS</html:p><html:p>REACTION: MNXR104848</html:p><html:p>CLASSIFICATION: 6.1.1.3</html:p><html:p>PATHWAYS: kegg:Aminoacyl-tRNA biosynthesis</html:p><html:p>XREFS: bigg:R_THRTRS;bigg:R_THRTRSm;bigg:THRTRS;bigg:THRTRSm;deprecated:MNXR84324;deprecated:MNXR91636;kegg:R03663;reactome:R-HSA-380002;reactome:R-HSA-380201;sabiork:391;seed:rxn06447</html:p><html:p>GENE ASSOCIATION: (bact:SYT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PGP140abcpp</html:p><html:p>REACTION: MNXR102551</html:p><html:p>XREFS: bigg:PGP140abcpp;bigg:R_PGP140abcpp;deprecated:MNXR4198</html:p><html:p>GENE ASSOCIATION: (bact:MSBA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_15fcc994-ceb6-46db-a95a-159c3502ab98"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102551"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGP140abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PGP140abcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MSBA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5272__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5272__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R5E8F2AAD" metaid="_4a0570ff-55c5-428f-a41d-351b444b8a55" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: 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rdf:resource="http://identifiers.org/bigg.reaction/R_FEtm"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-8"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM111__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM111__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R5E9DEC0C" metaid="a27488cd-eaed-475d-8b5c-276502cf9beb" 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species="MNXM93__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM722743__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R5F8D07AD" metaid="c5433e74-1d2f-4278-9883-ed40e79f70f0" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_SBTPD</html:p><html:p>REACTION: MNXR138824</html:p><html:p>CLASSIFICATION: 1.1.1.140</html:p><html:p>PATHWAYS: metacyc:D-sorbitol degradation II;metacyc:L-sorbose degradation;seed:D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization;seed:D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization/Sorbitol6P_to_Fructose6P;seed:D-Sorbitol(D-Glucitol)_and_L-Sorbose_Utilization/Sorbose1P_to_Fructose6P</html:p><html:p>XREFS: 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rhea:29679;rhea:29680;rhea:29681;rhea:29682;bigg:FORt;bigg:FORtex;bigg:FORti;bigg:FORtm;bigg:FORtppi;bigg:FORtr;bigg:FORtrn;bigg:R_FORt;bigg:R_FORtex;bigg:R_FORti;bigg:R_FORtm;bigg:R_FORtppi;bigg:R_FORtr;bigg:R_FORtrn;deprecated:MNXR2277;metacyc:TRANS-RXN-1;reactome:R-HSA-6803255;sabiork:12483;seed:rxn08525;seed:rxn08526;seed:rxn09682;seed:rxn09754</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ccfdab64-fa8b-4cf9-8f43-fb4a887c9d58"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99620"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29679"/> - <rdf:li 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bigg:PHEMEt;bigg:PHEMEth;bigg:PHEMEtiex;bigg:PHEMEtm;bigg:PHEMEtm_1;bigg:R_PHEMEt;bigg:R_PHEMEth;bigg:R_PHEMEtiex;bigg:R_PHEMEtm;bigg:R_PHEMEtm_1;deprecated:MNXR55834;deprecated:MNXR69706;reactome:R-BTA-917892;reactome:R-CEL-917892;reactome:R-CFA-917892;reactome:R-DME-917892;reactome:R-DRE-917892;reactome:R-GGA-917892;reactome:R-HSA-917892;reactome:R-MMU-917892;reactome:R-RNO-917892;reactome:R-SSC-917892;reactome:R-TGU-917892;reactome:R-XTR-917892</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bd719765-bebd-4b8a-a169-751f8de453eb"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102625"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEth"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEtiex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PHEMEtm_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PHEMEt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PHEMEth"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PHEMEtiex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PHEMEtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PHEMEtm_1"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-917892"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-917892"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM249__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM249__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R619E58DD" metaid="b0d6c558-6ad4-491a-86d3-9bb5ab2fafe8" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RNTR4c</html:p><html:p>REACTION: MNXR104080</html:p><html:p>XREFS: bigg:RNTR4c;bigg:R_RNTR4c;deprecated:MNXR32353</html:p><html:p>GENE ASSOCIATION: (bact:FENR_ECOLI and bact:FLAV_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FENR_ECOLI and bact:FLAW_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FLAV_ECOLI and bact:NRDD_ECOLI) or (bact:FLAW_ECOLI and bact:NRDD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b0d6c558-6ad4-491a-86d3-9bb5ab2fafe8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104080"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNTR4c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNTR4c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM121__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3707__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4076__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM452__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R61A6322A" metaid="f7645400-a2f3-47ef-a318-2ddb955bdb23" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FECRMabcpp</html:p><html:p>REACTION: MNXR99535</html:p><html:p>CLASSIFICATION: 3.6.3.34</html:p><html:p>XREFS: bigg:FECRMabcpp;bigg:R_FECRMabcpp;deprecated:MNXR2233;metacyc:TRANS-RXN-298;seed:rxn05188;seed:rxn08493</html:p><html:p>GENE ASSOCIATION: (bact:FHUB_ECOLI and bact:FHUC_ECOLI and bact:FHUD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f7645400-a2f3-47ef-a318-2ddb955bdb23"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99535"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.34"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FECRMabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FECRMabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-298"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FHUB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FHUC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FHUD_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2825__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2825__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R61E56333" metaid="_6be73073-b1d0-45a7-8ad8-052486a22f92" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MCPST</html:p><html:p>REACTION: MNXR138585</html:p><html:p>CLASSIFICATION: 2.8.1.2</html:p><html:p>PATHWAYS: metacyc:L-cysteine degradation III</html:p><html:p>XREFS: rhea:21740;rhea:21741;rhea:21742;rhea:21743;bigg:MCPST;bigg:R_MCPST;deprecated:MNXR101422;deprecated:MNXR3449;deprecated:MNXR69413;kegg:R03106;metacyc:MERCAPYSTRANS-RXN;sabiork:2944;seed:rxn02230</html:p><html:p>GENE ASSOCIATION: (bact:THTM_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6be73073-b1d0-45a7-8ad8-052486a22f92"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138585"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21740"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21741"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21742"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21743"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MCPST"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MCPST"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03106"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MERCAPYSTRANS-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/2944"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_THTM_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1214__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM254__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM762__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R61F6BBAA" metaid="_31cda9e6-862d-4744-8c91-1729bdbf7564" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PSERtex</html:p><html:p>REACTION: MNXR103246</html:p><html:p>XREFS: bigg:PSERtex;bigg:R_PSERtex;deprecated:MNXR4479;seed:rxn09204</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_31cda9e6-862d-4744-8c91-1729bdbf7564"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103246"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PSERtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PSERtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM379__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM379__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R61F917A1" metaid="a2db666d-f646-4102-80fe-2e2f7a83324e" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MN2t3pp</html:p><html:p>REACTION: MNXR101669</html:p><html:p>XREFS: bigg:MN2t3pp;bigg:R_MN2t3pp;deprecated:MNXR135892;deprecated:MNXR3610;seed:rxn08946</html:p><html:p>GENE ASSOCIATION: (bact:FIEF_ECOLI) or (bact:ZITB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2255__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R620657BE" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_HDCEAtexi</html:p><html:p>GENE ASSOCIATION: (bact:FADL_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FADL_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM162245__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM162245__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R6214EB38" metaid="_6a9a1c55-788c-45ad-be7f-66931c9b4072" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DIMPtex</html:p><html:p>REACTION: MNXR97463</html:p><html:p>XREFS: bigg:DIMPtex;bigg:R_DIMPtex;deprecated:MNXR1602;seed:rxn08342</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6a9a1c55-788c-45ad-be7f-66931c9b4072"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97463"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DIMPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DIMPtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1922__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1922__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R625DC447" metaid="_0bfb7f2a-d390-42fd-b706-2821d9557845" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_orn_e</html:p><html:p>REACTION: MNXR98813</html:p><html:p>XREFS: bigg:EX_orn__L_e;bigg:EX_orn_e;bigg:R_EX_orn__L_e;bigg:R_EX_orn_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0bfb7f2a-d390-42fd-b706-2821d9557845"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98813"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orn__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_orn_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_orn__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_orn_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM89689__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62891B15" metaid="c3c4f5b4-6f4d-4c8b-93b1-fa4a03063d12" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DMSOR1</html:p><html:p>REACTION: MNXR97529</html:p><html:p>XREFS: rhea:29203;rhea:29204;rhea:29205;rhea:29206;bigg:DMSOR1;bigg:R_DMSOR1;deprecated:MNXR26703;seed:rxn08354</html:p><html:p>GENE ASSOCIATION: (bact:DMSA_ECOLI and bact:DMSB_ECOLI and bact:DMSC_ECOLI) or (bact:YNFE_ECOLI and bact:YNFF_ECOLI and bact:YNFG_ECOLI and bact:YNFH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c3c4f5b4-6f4d-4c8b-93b1-fa4a03063d12"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97529"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29203"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29204"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29205"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29206"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMSOR1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DMSOR1"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_DMSA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DMSB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DMSC_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_YNFE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YNFF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YNFG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YNFH_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM223__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM745__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM444__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM509__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62A6333" metaid="_0e435afa-4699-4f8a-9e5d-4dc3bb39873c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_XPPT</html:p><html:p>REACTION: MNXR105243</html:p><html:p>CLASSIFICATION: 2.4.2.22</html:p><html:p>PATHWAYS: metacyc:xanthine and xanthosine salvage;seed:Purine_conversions;seed:Purine_conversions/AMP_to_ADP;seed:Purine_conversions/AMP_to_Hypoxanthine;seed:Purine_conversions/Adenine_to_AMP;seed:Purine_conversions/GDP_to_GTP;seed:Purine_conversions/GMP_to_GDP;seed:Purine_conversions/GMP_to_Guanine;seed:Purine_conversions/IMP_to_AMP;seed:Purine_conversions/IMP_to_GMP;seed:Purine_conversions/IMP_to_Hypoxanthine;seed:Purine_conversions/dADP_to_dAMP;seed:Purine_conversions/dGDP_to_dGMP</html:p><html:p>XREFS: rhea:10800;rhea:10801;rhea:10802;rhea:10803;deprecated:MNXR56050;deprecated:MNXR70076;metacyc:XANPRIBOSYLTRAN-RXN;sabiork:194;seed:rxn01544</html:p><html:p>GENE ASSOCIATION: (bact:XGPT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0e435afa-4699-4f8a-9e5d-4dc3bb39873c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105243"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.22"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10800"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10801"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10802"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10803"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XANPRIBOSYLTRAN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/194"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_XGPT_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM174__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM91__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM298__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R62A824F8" metaid="bc821724-2627-4740-9d7e-1a044deb2475" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FUCtex</html:p><html:p>REACTION: MNXR126762</html:p><html:p>XREFS: rhea:35003;rhea:35004;rhea:35005;rhea:35006;bigg:FUCtex;bigg:FUCtly;bigg:R_FUCtex;bigg:R_FUCtly;deprecated:MNXR2337;deprecated:MNXR99704;seed:rxn08540</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bc821724-2627-4740-9d7e-1a044deb2475"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126762"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/35003"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/35004"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/35005"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/35006"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUCtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUCtly"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FUCtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FUCtly"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM659__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM659__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62A9DD8B" metaid="c1b892a6-a385-435a-af30-8688cc8d096f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA2E160pp</html:p><html:p>REACTION: MNXR102999</html:p><html:p>XREFS: bigg:PLIPA2E160pp;bigg:R_PLIPA2E160pp;deprecated:MNXR4337</html:p><html:p>GENE ASSOCIATION: 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constant="true" species="MNXM32178__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM108__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM32511__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62C95B4F" metaid="_61974eb2-0e7b-488e-84da-fa2879876bb7" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_dms_e</html:p><html:p>REACTION: MNXR98424</html:p><html:p>XREFS: bigg:EX_dms_e;bigg:R_EX_dms_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_61974eb2-0e7b-488e-84da-fa2879876bb7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98424"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_dms_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_dms_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM444__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62D19DD0" metaid="_3f9db543-4d0d-415e-9b8f-e945131c5563" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PE180abcpp</html:p><html:p>REACTION: MNXR102450</html:p><html:p>XREFS: bigg:PE180abcpp;bigg:R_PE180abcpp;deprecated:MNXR4147;deprecated:MNXR69649;seed:rxn09078</html:p><html:p>GENE ASSOCIATION: (bact:MSBA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3f9db543-4d0d-415e-9b8f-e945131c5563"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102450"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PE180abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PE180abcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MSBA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM31536__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM31536__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62D2A1AD" metaid="_44f41175-f902-463b-a4ec-416dbf8642df" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_METabcpp</html:p><html:p>REACTION: MNXR101489</html:p><html:p>XREFS: rhea:29779#2;rhea:29780#2;rhea:29781#2;rhea:29782#2;rhea:32827#1;rhea:32828#1;rhea:32829#1;rhea:32830#1;bigg:METabc;bigg:METabcpp;bigg:R_METabc;bigg:R_METabcpp;deprecated:MNXR29006;metacyc:RXN0-4522;seed:rxn05219;seed:rxn08909;seed:rxn11151</html:p><html:p>GENE ASSOCIATION: (bact:METI_ECOLI and bact:METN_ECOLI and bact:METQ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_44f41175-f902-463b-a4ec-416dbf8642df"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101489"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29779#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29780#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29781#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29782#2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32827#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32828#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32829#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/32830#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/METabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_METabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_METabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-4522"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_METI_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_METN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_METQ_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R62F71C3C" metaid="_13765dff-7ecb-4b1f-9756-3dafc76a6bd5" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: 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R_EX_g1p_e</html:p><html:p>REACTION: MNXR98525</html:p><html:p>XREFS: bigg:EX_g1p_e;bigg:R_EX_g1p_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a908af2a-2793-4341-acf4-7b672805dd1f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98525"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_g1p_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_g1p_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM89588__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R669A7661" 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(bact:ILVH_ECOLI and bact:ILVI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0c068207-1bb2-41ff-84b4-23a492ea561d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95260"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.6"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27654"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27655"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27656"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27657"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACHBS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACHBSm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACHBS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACHBSm"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08648"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETOOHBUTSYN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/6688"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ILVB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ILVN_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ILVH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ILVI_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM159__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM114220__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R66BBD05C" metaid="_3458ce4e-c8b8-47e1-a301-01a102204552" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_OCDCEAtexi</html:p><html:p>REACTION: MNXR99110</html:p><html:p>XREFS: rhea:33655;rhea:33656;rhea:33657;rhea:33658;bigg:FA18111Zh;bigg:OCDCEAt;bigg:OCDCEAtexi;bigg:R_FA18111Zh;bigg:R_OCDCEAt;bigg:R_OCDCEAtexi;bigg:R_r1301;bigg:R_r1302;bigg:r1301;bigg:r1302;sabiork:10346</html:p><html:p>GENE ASSOCIATION: (bact:FADL_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/bigg.reaction/R_r1301"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_r1302"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r1301"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r1302"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/10346"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FADL_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM306__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM306__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R6716F9D5" metaid="e54554c5-ebd4-4c64-8963-1fcef10f5634" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_ca2_e</html:p><html:p>REACTION: MNXR98318</html:p><html:p>XREFS: bigg:EX_ca2_e;bigg:R_EX_ca2_e;bigg:R_SK_ca2_c;bigg:SK_ca2_c</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e54554c5-ebd4-4c64-8963-1fcef10f5634"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98318"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_ca2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_ca2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SK_ca2_c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SK_ca2_c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM128__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R67699060" metaid="_8a4159d2-da64-4c22-832d-282261bd574b" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NADH16pp</html:p><html:p>REACTION: MNXR101864</html:p><html:p>CLASSIFICATION: 1.6.5.3</html:p><html:p>XREFS: bigg:NADH16;bigg:NADH16pp;bigg:R_NADH16;bigg:R_NADH16pp;deprecated:MNXR55740;deprecated:MNXR83429;seed:rxn08972</html:p><html:p>GENE ASSOCIATION: (bact:NUOA_ECOLI and bact:NUOB_ECOLI and bact:NUOCD_ECOLI and bact:NUOE_ECOLI and bact:NUOF_ECOLI and bact:NUOG_ECOLI and bact:NUOH_ECOLI and bact:NUOI_ECOLI and bact:NUOJ_ECOLI and bact:NUOK_ECOLI and bact:NUOL_ECOLI and bact:NUOM_ECOLI and bact:NUON_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP 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stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="4"/> - <speciesReference constant="true" species="MNXM191__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R6779EAE4" metaid="caca06ea-90d0-4296-b2c5-a464dd7e0cb5" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ASNt2rpp</html:p><html:p>REACTION: MNXR96066</html:p><html:p>XREFS: bigg:ASNt2m;bigg:ASNt2r;bigg:ASNt2rpp;bigg:ASNt7;bigg:R_ASNt2m;bigg:R_ASNt2r;bigg:R_ASNt2rpp;bigg:R_ASNt7;deprecated:MNXR29109;metacyc:TRANS-RXN-262;seed:rxn05508;seed:rxn08161;seed:rxn09782;seed:rxn11321;seed:rxn13230</html:p><html:p>GENE ASSOCIATION: (bact:ANSP_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: 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sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FEOXAMR3</html:p><html:p>REACTION: MNXR135820</html:p><html:p>XREFS: bigg:FEOXAMR3;bigg:R_FEOXAMR3;deprecated:MNXR31372;deprecated:MNXR68989;deprecated:MNXR99553;seed:rxn08513</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_11a247a2-8947-4c0b-8060-62ae1be989eb"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR135820"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FEOXAMR3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FEOXAMR3"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="5"/> - 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rdf:resource="http://identifiers.org/biocyc/META:ADCLY-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PABC_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1458__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM421__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6957F5DB" metaid="_8f6c9ac7-b6e1-4eef-9a16-12907058fd5c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3OAS100</html:p><html:p>REACTION: MNXR109251</html:p><html:p>CLASSIFICATION: 2.3.1.-;2.3.1.179;2.3.1.180;2.3.1.41;2.3.1.85;2.3.1.86</html:p><html:p>PATHWAYS: kegg:Fatty acid biosynthesis;kegg:Fatty acid metabolism;kegg:Metabolic pathways;metacyc:palmitate biosynthesis II (bacteria and plants);seed:Fatty_Acid_Biosynthesis_FASII;seed:Fatty_Acid_Biosynthesis_FASII/AcetylCoA_to_MalonylCoA</html:p><html:p>XREFS: deprecated:MNXR36127;deprecated:MNXR37882;deprecated:MNXR68192;deprecated:MNXR81380;kegg:R04960;metacyc:RXN-9527;sabiork:4598;seed:rxn05343</html:p><html:p>GENE ASSOCIATION: (bact:FABB_ECOLI) or (bact:FABF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8f6c9ac7-b6e1-4eef-9a16-12907058fd5c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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rdf:resource="http://identifiers.org/bigg.reaction/BALAt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_BALAt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_BALAt2r"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-5201"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_CYCA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM144__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM144__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R69675206" metaid="b2a10b18-310c-49df-a60d-30d52e1fc43e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CLPNH161pp</html:p><html:p>REACTION: MNXR96778</html:p><html:p>XREFS: bigg:CLPNH161pp;bigg:R_CLPNH161pp;deprecated:MNXR1201</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b2a10b18-310c-49df-a60d-30d52e1fc43e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96778"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNH161pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CLPNH161pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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species="MNXM368__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM368__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R69A4B483" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ACGAM1PPpp</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM340__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM143__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" 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species="MNXM738__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6CE32DB9" metaid="_9c057e25-aebe-4495-8d6d-4e21e5c37c4a" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA1G180pp</html:p><html:p>REACTION: MNXR102986</html:p><html:p>XREFS: bigg:PLIPA1G180pp;bigg:R_PLIPA1G180pp;deprecated:MNXR4324</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9c057e25-aebe-4495-8d6d-4e21e5c37c4a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102986"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1G180pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PLIPA1G180pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM75102__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM150642__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM236__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6D028AEA" metaid="a45b461f-df1b-49b4-8d03-d50b454ce063" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RNTR2c</html:p><html:p>REACTION: MNXR104074</html:p><html:p>XREFS: bigg:RNTR2c;bigg:R_RNTR2c;deprecated:MNXR54059</html:p><html:p>GENE ASSOCIATION: (bact:FENR_ECOLI and bact:FLAV_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FENR_ECOLI and bact:FLAW_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FLAV_ECOLI and bact:NRDD_ECOLI) or (bact:FLAW_ECOLI and bact:NRDD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a45b461f-df1b-49b4-8d03-d50b454ce063"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104074"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNTR2c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNTR2c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3707__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM51__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM344__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4076__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R6D0ED767" metaid="a2a86534-c9f6-48d0-8211-168a4ec7b246" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MMETtex</html:p><html:p>REACTION: MNXR101659</html:p><html:p>XREFS: bigg:MMETtex;bigg:R_MMETtex;deprecated:MNXR3603;metacyc:TRANS-RXN0-486;seed:rxn08945</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a2a86534-c9f6-48d0-8211-168a4ec7b246"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101659"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MMETtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MMETtex"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-486"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1119__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1119__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6D22F61B" metaid="_81bfa814-5bf0-4a0a-bd2e-4caa0e8d80c4" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ALAabcpp</html:p><html:p>REACTION: MNXR95703</html:p><html:p>XREFS: bigg:ALAabc;bigg:ALAabcpp;bigg:R_ALAabc;bigg:R_ALAabcpp;deprecated:MNXR635;seed:rxn08097;seed:rxn10170</html:p><html:p>GENE ASSOCIATION: (bact:LIVF_ECOLI and bact:LIVG_ECOLI and bact:LIVH_ECOLI and bact:LIVJ_ECOLI and bact:LIVM_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_81bfa814-5bf0-4a0a-bd2e-4caa0e8d80c4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95703"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALAabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALAabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_LIVF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVM_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM32__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM32__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R6D2C9CB6" metaid="_9828be1d-e434-4bd8-9c42-73f72dbc40a4" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GTPtex</html:p><html:p>REACTION: MNXR100462</html:p><html:p>XREFS: bigg:GTPtex;bigg:GTPtn;bigg:R_GTPtex;bigg:R_GTPtn;deprecated:MNXR2842;seed:rxn08680;seed:rxn12663</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9828be1d-e434-4bd8-9c42-73f72dbc40a4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100462"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GTPtn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GTPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GTPtn"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM51__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM51__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6D2E2059" metaid="_2376f6d3-3cca-4cac-8a8c-c0745a80a01e" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FRUpts2pp</html:p><html:p>REACTION: MNXR138360</html:p><html:p>XREFS: bigg:FRUpts2;bigg:FRUpts2pp;bigg:R_FRUpts2;bigg:R_FRUpts2pp;deprecated:MNXR135824;deprecated:MNXR55438;deprecated:MNXR69018;deprecated:MNXR82882;deprecated:MNXR99662;seed:rxn08535;seed:rxn10175</html:p><html:p>GENE ASSOCIATION: (bact:PT1_ECOLI and bact:PTHP_ECOLI and bact:PTNAB_ECOLI and bact:PTNC_ECOLI and bact:PTND_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2376f6d3-3cca-4cac-8a8c-c0745a80a01e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138360"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUpts2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUpts2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FRUpts2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FRUpts2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNAB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTND_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1380__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM155029__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6D2F5F0E" metaid="bac84448-984e-49eb-8451-a9d9957e2fe9" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GALCTNLt2pp</html:p><html:p>REACTION: MNXR99958</html:p><html:p>XREFS: rhea:28823;rhea:28824;rhea:28825;rhea:28826;bigg:GALCTNLt2pp;bigg:R_GALCTNLt2pp;deprecated:MNXR31501;deprecated:MNXR69092;metacyc:TRANS-RXN0-227;seed:rxn08576</html:p><html:p>GENE ASSOCIATION: (bact:LGOT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bac84448-984e-49eb-8451-a9d9957e2fe9"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99958"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28823"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28824"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28825"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28826"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTNLt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GALCTNLt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-227"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LGOT_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM636__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM636__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6D5B2F8E" metaid="_52b46782-e8f8-4e3a-acbc-f099fdb8e1a6" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GTHRDHpp</html:p><html:p>REACTION: MNXR100136</html:p><html:p>CLASSIFICATION: 3.4.19;3.4.19.13</html:p><html:p>PATHWAYS: kegg:Glutathione metabolism;kegg:Metabolic pathways;metacyc:glutathione degradation (DUG pathway - 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rdf:resource="http://identifiers.org/bigg.reaction/CLPNS160pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CLPNS160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CLPNS160pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_CLSA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CLSB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM32179__64__MNXC19" stoichiometry="2"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM45654__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89612__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R6E41DEFE" metaid="d34ba20f-b7a7-4701-a4dc-ebcd1b2c4eb7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_UM4PCP</html:p><html:p>REACTION: MNXR136006</html:p><html:p>XREFS: bigg:R_UM4PCP;bigg:UM4PCP;deprecated:MNXR105116;deprecated:MNXR56027;deprecated:MNXR84391;seed:rxn09359</html:p><html:p>GENE ASSOCIATION: (bact:LDCA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d34ba20f-b7a7-4701-a4dc-ebcd1b2c4eb7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR136006"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_UM4PCP"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UM4PCP"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - 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R_PGSA160</html:p><html:p>REACTION: MNXR102592</html:p><html:p>CLASSIFICATION: 2.7.8.5</html:p><html:p>XREFS: bigg:PGSA160;bigg:R_PGSA160;deprecated:MNXR4224;deprecated:MNXR69695;seed:rxn09111</html:p><html:p>GENE ASSOCIATION: (bact:PGSA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_420270fb-c242-4d0d-ab41-d0ce88c33367"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102592"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGSA160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PGSA160"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM105630__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM45__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90831__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R77B549B2" metaid="_695b985a-2f27-446a-8198-48eaf782c1f3" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_4abut_e</html:p><html:p>REACTION: MNXR98058</html:p><html:p>XREFS: bigg:EX_4abut_e;bigg:R_EX_4abut_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_695b985a-2f27-446a-8198-48eaf782c1f3"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98058"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4abut_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_4abut_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM192__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R77CA67D2" metaid="_02b32c84-849a-463c-a505-fd6a96a5b2b1" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FMNRx2</html:p><html:p>REACTION: MNXR99597</html:p><html:p>CLASSIFICATION: 1.5.1.-;1.5.1.38;1.5.1.39</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Riboflavin metabolism;metacyc:bacterial bioluminescence;metacyc:two-component alkanesulfonate monooxygenase</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/bigg.reaction/KDOPS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_KDOPS"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03254"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/3075"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_KDSA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1184__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM146080__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7818A812" metaid="dc1851f4-7570-4339-b569-4c008ad0324c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_2AGPEAT160</html:p><html:p>REACTION: MNXR94760</html:p><html:p>CLASSIFICATION: 2.3.1.40</html:p><html:p>XREFS: bigg:2AGPEAT160;bigg:R_2AGPEAT160;deprecated:MNXR65;deprecated:MNXR68136;seed:rxn07949</html:p><html:p>GENE ASSOCIATION: (bact:AAS_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#dc1851f4-7570-4339-b569-4c008ad0324c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94760"/> - <rdf:li 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stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R783ED1C4" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA1G161pp</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM75101__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM162245__64__MNXC19" stoichiometry="1"/> - 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bigg:RNDR4;bigg:RNDR4n;bigg:R_RNDR4;bigg:R_RNDR4n;deprecated:MNXR84124;kegg:R02018;metacyc:UDPREDUCT-RXN;seed:rxn06075</html:p><html:p>GENE ASSOCIATION: (bact:RIR1_ECOLI and bact:RIR2_ECOLI and bact:THIO2_ECOLI) or (bact:RIR1_ECOLI and bact:RIR2_ECOLI and bact:THIO_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8c944efe-437e-4a52-80de-a43a5a8a06f7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104066"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNDR4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNDR4n"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNDR4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNDR4n"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02018"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UDPREDUCT-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_RIR1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR2_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_THIO2_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_RIR1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR2_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_THIO_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM17__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM96993__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM148__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM572__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R785C83BD" metaid="c5a421d1-7265-4d4b-b7c5-dddf513ede8c" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_RMNtpp</html:p><html:p>REACTION: MNXR138796</html:p><html:p>XREFS: rhea:29947;rhea:29948;rhea:29949;rhea:29950;bigg:RMNt;bigg:RMNtpp;bigg:R_RMNt;bigg:R_RMNtpp;deprecated:MNXR104041;deprecated:MNXR4632;deprecated:MNXR90742;metacyc:TRANS-RXN-112;seed:rxn05646;seed:rxn09230</html:p><html:p>GENE ASSOCIATION: (bact:RHAT_ECOLI)</html:p><html:p>PROP BC-b: 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rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-112"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_RHAT_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1151__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1151__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7874EF5C" metaid="_7ddb412b-8175-4010-87d6-8dd322bf7696" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AMPN</html:p><html:p>REACTION: MNXR95827</html:p><html:p>CLASSIFICATION: 3.2.2.4</html:p><html:p>XREFS: bigg:AMPN;bigg:R_AMPN;deprecated:MNXR68363</html:p><html:p>GENE ASSOCIATION: (bact:AMN_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_7ddb412b-8175-4010-87d6-8dd322bf7696"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95827"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPN"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_AMN_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM15900__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM168__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R78A34CF9" metaid="ceab4a85-4744-43e7-8376-4c67ef6d7f3d" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ASPt2_2pp</html:p><html:p>REACTION: MNXR96104</html:p><html:p>XREFS: rhea:29287;rhea:29288;rhea:29289;rhea:29290;bigg:ASPt2_2;bigg:ASPt2_2pp;bigg:R_ASPt2_2;bigg:R_ASPt2_2pp;deprecated:MNXR874;metacyc:TRANS-RXN-122A;seed:rxn08169;seed:rxn10151</html:p><html:p>GENE ASSOCIATION: (bact:DCTA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ceab4a85-4744-43e7-8376-4c67ef6d7f3d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96104"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29287"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29288"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29289"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29290"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPt2_2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ASPt2_2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASPt2_2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ASPt2_2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-122A"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_DCTA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM42__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM42__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R78A55FA2" metaid="_9893ab19-b8e2-4eb2-a0a0-af1a2ce74b0a" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_acmana_e</html:p><html:p>REACTION: MNXR98210</html:p><html:p>XREFS: bigg:EX_acmana_e;bigg:R_EX_acmana_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9893ab19-b8e2-4eb2-a0a0-af1a2ce74b0a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98210"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_acmana_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_acmana_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2403__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R78AFA5FE" metaid="b8a1256f-fa46-4a5b-8680-cbc30c987bf8" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PG140abcpp</html:p><html:p>REACTION: MNXR102517</html:p><html:p>XREFS: bigg:PG140abcpp;bigg:R_PG140abcpp</html:p><html:p>GENE ASSOCIATION: (bact:MSBA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b8a1256f-fa46-4a5b-8680-cbc30c987bf8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102517"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG140abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PG140abcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MSBA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM51019__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM51019__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R78C6084C" metaid="f7435270-c08e-4f14-a4a9-57485c6396bc" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3OAR121</html:p><html:p>REACTION: MNXR94943</html:p><html:p>CLASSIFICATION: 1.1.1.100</html:p><html:p>XREFS: bigg:3OAR121;bigg:R_3OAR121;deprecated:MNXR187;seed:rxn07987</html:p><html:p>GENE ASSOCIATION: (bact:FABG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f7435270-c08e-4f14-a4a9-57485c6396bc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94943"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> - <rdf:li 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id="R78C92ADE" metaid="_42a6a493-b6d9-4e13-801f-21903abe2dce" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NODOx</html:p><html:p>REACTION: MNXR101996</html:p><html:p>CLASSIFICATION: 1.14.12.17</html:p><html:p>XREFS: rhea:19469;rhea:19470;rhea:19471;rhea:19472;bigg:NODOx;bigg:R_NODOx;deprecated:MNXR132732;deprecated:MNXR3849;kegg:R05724;sabiork:5318</html:p><html:p>GENE ASSOCIATION: (bact:HMP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_42a6a493-b6d9-4e13-801f-21903abe2dce"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101996"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.12.17"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/19469"/> - <rdf:li 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rdf:resource="http://identifiers.org/kegg.reaction/R00275"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SUPEROX-DISMUT-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_SODF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_SODM_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM330__64__MNXC3" stoichiometry="2"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM22__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R78FF7DC6" metaid="cb1b12b8-c633-4e1e-a0b8-1db35d2f7c7d" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PROabcpp</html:p><html:p>REACTION: MNXR103210</html:p><html:p>XREFS: rhea:29815#1;rhea:29816#1;rhea:29817#1;rhea:29818#1;bigg:PROabc;bigg:PROabcpp;bigg:R_PROabc;bigg:R_PROabcpp;metacyc:ABC-26-RXN;seed:rxn05165;seed:rxn09187</html:p><html:p>GENE ASSOCIATION: (bact:PROV_ECOLI and bact:PROW_ECOLI and bact:PROX_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#cb1b12b8-c633-4e1e-a0b8-1db35d2f7c7d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103210"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29815#1"/> - <rdf:li 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MNXR98152</html:p><html:p>XREFS: bigg:EX_HC02172_e;bigg:EX_zn2_e;bigg:R_EX_HC02172_e;bigg:R_EX_zn2_e</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9648a7b7-7c6b-4ab3-beb7-f253ca60af12"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98152"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_HC02172_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_zn2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_HC02172_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_zn2_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM149__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R7A5EE4BE" metaid="e9fad84c-68cd-487f-bbc7-ad88628d8cf3" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FALDtex</html:p><html:p>REACTION: MNXR99238</html:p><html:p>XREFS: bigg:FALDtex;bigg:FALDtly;bigg:FALDtm;bigg:FALDtpp;bigg:R_FALDtex;bigg:R_FALDtly;bigg:R_FALDtm;bigg:R_FALDtpp;bigg:R_r1421;bigg:r1421;deprecated:MNXR55362;deprecated:MNXR68883;seed:rxn08461;seed:rxn08462</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e9fad84c-68cd-487f-bbc7-ad88628d8cf3"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99238"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtly"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FALDtpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FALDtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FALDtly"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FALDtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FALDtpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_r1421"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r1421"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM56__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM56__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7A6507A7" metaid="c527f8cf-1e93-4842-9cc0-529a296d6542" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DMSOR1pp</html:p><html:p>REACTION: MNXR97530</html:p><html:p>XREFS: bigg:DMSOR1e;bigg:DMSOR1pp;bigg:R_DMSOR1e;bigg:R_DMSOR1pp;deprecated:MNXR50869;seed:rxn08355;seed:rxn10129</html:p><html:p>GENE ASSOCIATION: (bact:TORY_ECOLI and bact:TORZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c527f8cf-1e93-4842-9cc0-529a296d6542"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97530"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMSOR1e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DMSOR1pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DMSOR1e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DMSOR1pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_TORY_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TORZ_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM223__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM745__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM444__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM509__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7A9F72B0" metaid="c762b8c6-8d13-45d7-96da-ed2116dd710e" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_gtp_e</html:p><html:p>REACTION: MNXR98631</html:p><html:p>XREFS: bigg:EX_gtp_e;bigg:R_EX_gtp_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c762b8c6-8d13-45d7-96da-ed2116dd710e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98631"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gtp_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_gtp_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM51__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R7ABF296E" metaid="_5134a6e9-f484-4fe2-a4d5-5ced8b4c1251" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NH4tex</html:p><html:p>REACTION: MNXR101950</html:p><html:p>XREFS: rhea:28747;rhea:28748;rhea:28749;rhea:28750;bigg:NH4t;bigg:NH4tex;bigg:NH4ti;bigg:NH4tm;bigg:NH4tn;bigg:NH4tp;bigg:NH4tpp;bigg:R_NH4t;bigg:R_NH4tex;bigg:R_NH4ti;bigg:R_NH4tm;bigg:R_NH4tn;bigg:R_NH4tp;bigg:R_NH4tpp;deprecated:MNXR3814;deprecated:MNXR82602;metacyc:RXN-9615;metacyc:TRANS-RXN0-206;metacyc:TRANS-RXN0-544;reactome:R-BTA-444416;reactome:R-CEL-444416;reactome:R-CFA-444416;reactome:R-DDI-444416;reactome:R-DME-444416;reactome:R-DRE-444416;reactome:R-GGA-444416;reactome:R-HSA-444416;reactome:R-MMU-444416;reactome:R-RNO-444416;reactome:R-SSC-444416;reactome:R-TGU-444416;reactome:R-XTR-444416;sabiork:11683;seed:rxn05466;seed:rxn08986;seed:rxn08987;seed:rxn09736;seed:rxn09835;seed:rxn13364</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5134a6e9-f484-4fe2-a4d5-5ced8b4c1251"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4ti"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4ti"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/11683"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM15__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM15__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R7AF96ED5" metaid="b77e9765-ee28-485d-9f18-4ea8e1eb05b5" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_na1_e</html:p><html:p>REACTION: MNXR97601</html:p><html:p>XREFS: bigg:DM_na1_c;bigg:DM_na1_h;bigg:DM_na1_m;bigg:DM_na1_x;bigg:EX_na1_e;bigg:R_DM_na1_c;bigg:R_DM_na1_h;bigg:R_DM_na1_m;bigg:R_DM_na1_x;bigg:R_EX_na1_e</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b77e9765-ee28-485d-9f18-4ea8e1eb05b5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97601"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DM_na1_c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DM_na1_h"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DM_na1_m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DM_na1_x"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_na1_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DM_na1_c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DM_na1_h"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DM_na1_m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DM_na1_x"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_na1_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM27__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7B21868C" metaid="ffcee875-cbbe-4258-a8af-8dcac4ce8892" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PAPA161pp</html:p><html:p>REACTION: MNXR102353</html:p><html:p>XREFS: bigg:PAPA161;bigg:PAPA161pp;bigg:R_PAPA161;bigg:R_PAPA161pp;deprecated:MNXR4094</html:p><html:p>GENE ASSOCIATION: 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3.6.1.26</html:p><html:p>XREFS: bigg:CDAPPA120;bigg:R_CDAPPA120;deprecated:MNXR1077;deprecated:MNXR68488;seed:rxn08199</html:p><html:p>GENE ASSOCIATION: (bact:CDH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a3f6164d-4424-4063-86d4-70c8d8853272"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96500"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.26"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CDAPPA120"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CDAPPA120"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - 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reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_23CAMPtex</html:p><html:p>REACTION: MNXR94718</html:p><html:p>XREFS: bigg:23CAMPtex;bigg:R_23CAMPtex;deprecated:MNXR28;seed:rxn07925</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#add66b6e-5431-40ea-b6f6-c0042936c457"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94718"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/23CAMPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_23CAMPtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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environments;kegg:Sulfur metabolism;metacyc:thiosulfate disproportionation IV (rhodanese);seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerol3P_to_GlyceroneP;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerol_to_GlyceroneP;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerophosphocholine_to_GlyceroneP_and_Choline;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerophosphoethanolamine_to_GlyceroneP_and_Ethanolamine</html:p><html:p>XREFS: rhea:16881;rhea:16882;rhea:16883;rhea:16884;bigg:CYANST;bigg:CYANSTm;bigg:CYANSTpp;bigg:R_CYANST;bigg:R_CYANSTm;bigg:R_CYANSTpp;deprecated:MNXR1326;deprecated:MNXR68599;deprecated:MNXR96956;kegg:R01931;metacyc:THIOSULFATE-SULFURTRANSFERASE-RXN;sabiork:7692;seed:rxn01416</html:p><html:p>GENE ASSOCIATION: (bact:PSPE_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: 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constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R7B77AD9A" metaid="b19603d0-81d5-410e-985d-4ca1bf93e301" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_12PPDStpp</html:p><html:p>REACTION: MNXR94684</html:p><html:p>XREFS: bigg:12PPDStex;bigg:12PPDStpp;bigg:12PPDt;bigg:R_12PPDStex;bigg:R_12PPDStpp;bigg:R_12PPDt;deprecated:MNXR15</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b19603d0-81d5-410e-985d-4ca1bf93e301"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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rdf:resource="http://identifiers.org/bigg.reaction/MLTGY2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MLTGY2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_EMTA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MLTA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MLTB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MLTC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_SLT_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM88346__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="4"/> - <speciesReference constant="true" species="MNXM63488__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM63489__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R7E28CE52" metaid="_186237dc-b04d-4afd-8581-bfdebea7cd9e" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CRNt2rpp</html:p><html:p>REACTION: MNXR96907</html:p><html:p>XREFS: bigg:CRNt2rpp;bigg:R_CRNt2rpp;deprecated:MNXR50827;deprecated:MNXR68591</html:p><html:p>GENE ASSOCIATION: (bact:PROP_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_186237dc-b04d-4afd-8581-bfdebea7cd9e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96907"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CRNt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CRNt2rpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PROP_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM173__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM173__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7E2DAC69" metaid="a0acb91d-b8f9-4072-a9f8-2c83337bf49d" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CDAPPA181</html:p><html:p>REACTION: MNXR96507</html:p><html:p>CLASSIFICATION: 3.6.1.26</html:p><html:p>XREFS: bigg:CDAPPA181;bigg:R_CDAPPA181;deprecated:MNXR1084;deprecated:MNXR68495;seed:rxn08205</html:p><html:p>GENE ASSOCIATION: (bact:CDH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a0acb91d-b8f9-4072-a9f8-2c83337bf49d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96507"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.26"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CDAPPA181"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CDAPPA181"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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rdf:resource="http://identifiers.org/bigg.reaction/R_NTD7e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD7l"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD7pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_r0047"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r0047"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00183"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AMP-DEPHOSPHORYLATION-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/295"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_APHA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_USHA_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM14__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM212__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R7E691EF1" metaid="f127f0f4-0ec8-41e1-89d8-2b9f42908201" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_but_e</html:p><html:p>REACTION: MNXR128296</html:p><html:p>XREFS: rhea:45248;rhea:45249;rhea:45250;rhea:45251;seed:rxn08184;seed:rxn11382</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - 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species="MNXM66__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R835EDBFE" metaid="_3ff25834-a121-4e86-a120-6e5215d96804" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ABTA</html:p><html:p>REACTION: MNXR95186</html:p><html:p>CLASSIFICATION: 2.6.1.19</html:p><html:p>PATHWAYS: kegg:Alanine, aspartate and glutamate metabolism;kegg:Butanoate metabolism;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;metacyc:4-aminobutanoate degradation I;metacyc:4-aminobutanoate degradation II;metacyc:4-aminobutanoate degradation III;metacyc:4-aminobutanoate degradation V;metacyc:GABA shunt;metacyc:L-glutamate degradation IV;metacyc:nicotine degradation I (pyridine 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<fbc:geneProductRef fbc:geneProduct="G_UPPP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YBJG_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5043__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM251__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R83ED5B3" metaid="ca93ac2f-1bb1-400e-876c-1f6583c9c808" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLUSy</html:p><html:p>REACTION: MNXR100291</html:p><html:p>CLASSIFICATION: 1.4.1.13</html:p><html:p>PATHWAYS: 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rdf:resource="http://identifiers.org/bigg.reaction/R_GLUS_nadph"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLUSy"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00114"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUTAMATESYN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/694"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLTB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_GLTD_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM20__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM37__64__MNXC3" stoichiometry="1"/> - <speciesReference 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rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98743"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_manglyc_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_manglyc_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1624__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R8407AA58" metaid="eb7115bb-4386-453d-9ef5-502c6e1a29cb" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PAPA160pp</html:p><html:p>REACTION: MNXR102350</html:p><html:p>CLASSIFICATION: 3.1.3.4</html:p><html:p>XREFS: bigg:PAPA160;bigg:PAPA160h;bigg:PAPA160pp;bigg:R_PAPA160;bigg:R_PAPA160h;bigg:R_PAPA160pp;deprecated:MNXR4093</html:p><html:p>GENE ASSOCIATION: (bact:PGPB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: 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</fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM316__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM168__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4391__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R841CD691" metaid="bd919540-ec07-43e3-8eda-a59258909fd7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ME1</html:p><html:p>REACTION: MNXR101446</html:p><html:p>CLASSIFICATION: 1.1.1.38;1.1.1.39</html:p><html:p>PATHWAYS: kegg:Carbon fixation in photosynthetic organisms;kegg:Carbon metabolism;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;kegg:Pyruvate metabolism;metacyc:C4 photosynthetic carbon 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R_G6Pt6_2pp</html:p><html:p>REACTION: MNXR99913</html:p><html:p>XREFS: bigg:G6Pt6_2;bigg:G6Pt6_2pp;bigg:R_G6Pt6_2;bigg:R_G6Pt6_2pp;deprecated:MNXR55522;deprecated:MNXR69086;seed:rxn05563;seed:rxn08569</html:p><html:p>GENE ASSOCIATION: (bact:UHPT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ca22a01c-9f34-49e7-a81b-c61ef3d97458"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99913"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G6Pt6_2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G6Pt6_2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_G6Pt6_2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_G6Pt6_2pp"/> - </rdf:Bag> - 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R84624DB0" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA1E161pp</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM71458__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - 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constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM498__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM32__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4835__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R84E6F4F3" metaid="ddaf90eb-28f8-47f7-8d9f-860af7a92348" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA1A141pp</html:p><html:p>REACTION: MNXR102969</html:p><html:p>CLASSIFICATION: 3.1.1.32</html:p><html:p>XREFS: bigg:PLIPA1A141pp;bigg:R_PLIPA1A141pp;deprecated:MNXR51029</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF 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<listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5490__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM641__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R85054AF9" metaid="_98c4cca2-6e0c-4cbd-8046-eeb55baeb67e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MOAT3C</html:p><html:p>REACTION: MNXR101686</html:p><html:p>XREFS: bigg:MOAT3C;bigg:R_MOAT3C;deprecated:MNXR3621;deprecated:MNXR69478;seed:rxn08954</html:p><html:p>GENE ASSOCIATION: (bact:RFAZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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species="MNXM58984__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R850E0439" metaid="_436d6648-e1ee-42e7-ab5b-933568698ca8" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_glcn_e</html:p><html:p>REACTION: MNXR98574</html:p><html:p>XREFS: bigg:EX_glcn__D_e;bigg:EX_glcn_e;bigg:R_EX_glcn__D_e;bigg:R_EX_glcn_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_436d6648-e1ee-42e7-ab5b-933568698ca8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98574"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcn__D_e"/> - <rdf:li 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM368__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM368__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R85C46995" metaid="_9ac89bd9-2899-4f62-98d3-0b3ad9afcc5b" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_LEUtex</html:p><html:p>REACTION: MNXR101057</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/bigg.reaction/R_LEUtec"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LEUtex"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN66-447"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/13056"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM140__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM140__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R85F4DE78" metaid="_705a5811-522e-4b69-8ac3-5a9b579dc8f0" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_RMNtex</html:p><html:p>REACTION: MNXR138797</html:p><html:p>XREFS: bigg:RMNtex;bigg:R_RMNtex;deprecated:MNXR4633;seed:rxn09229</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_705a5811-522e-4b69-8ac3-5a9b579dc8f0"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138797"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RMNtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RMNtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1151__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1151__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R85F605B7" metaid="_1e9e8655-58d7-48f1-9d1a-3d233387a554" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NTD6pp</html:p><html:p>REACTION: MNXR102036</html:p><html:p>CLASSIFICATION: 3.1.3.5;3.1.3.89</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Purine metabolism;seed:Purine_conversions;seed:Purine_conversions/AMP_to_ADP;seed:Purine_conversions/AMP_to_Hypoxanthine;seed:Purine_conversions/Adenine_to_AMP;seed:Purine_conversions/GDP_to_GTP;seed:Purine_conversions/GMP_to_GDP;seed:Purine_conversions/GMP_to_Guanine;seed:Purine_conversions/IMP_to_AMP;seed:Purine_conversions/IMP_to_GMP;seed:Purine_conversions/IMP_to_Hypoxanthine;seed:Purine_conversions/dADP_to_dAMP;seed:Purine_conversions/dGDP_to_dGMP</html:p><html:p>XREFS: rhea:29371;rhea:29372;rhea:29373;rhea:29374;bigg:NTD6;bigg:NTD6l;bigg:NTD6pp;bigg:R_NTD6;bigg:R_NTD6l;bigg:R_NTD6pp;deprecated:MNXR3879;deprecated:MNXR80997;kegg:R02088;metacyc:RXN-14161;sabiork:282;seed:rxn01507;seed:rxn13134</html:p><html:p>GENE ASSOCIATION: (bact:APHA_ECOLI) or (bact:USHA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: 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xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_NUPG_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM401__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM401__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R8674D03C" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL1G120pp</html:p><html:p>GENE ASSOCIATION: (bact:TESA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation 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constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM88__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R869AF6C7" metaid="_504961a3-0028-4dad-94d3-53dcec38b2b6" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DHAtex</html:p><html:p>REACTION: MNXR97367</html:p><html:p>XREFS: bigg:DHAt;bigg:DHAtex;bigg:DHAtpp;bigg:R_DHAt;bigg:R_DHAtex;bigg:R_DHAtpp;deprecated:MNXR1541;metacyc:TRANS-RXN0-559;seed:rxn05532;seed:rxn08325;seed:rxn08326</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - 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rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-225"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/13793"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM98__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM98__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R86D6FB41" metaid="_984ea905-d1e4-4a76-9f0f-cfeee5f9d54d" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DB4PS</html:p><html:p>REACTION: MNXR97178</html:p><html:p>CLASSIFICATION: 4.1.99.12</html:p><html:p>PATHWAYS: kegg:Biosynthesis of secondary metabolites;kegg:Metabolic pathways;kegg:Riboflavin metabolism;metacyc:flavin biosynthesis I (bacteria and plants);metacyc:flavin biosynthesis II (archaea);metacyc:flavin biosynthesis III (fungi);seed:Riboflavin,_FMN_and_FAD_metabolism;seed:Riboflavin,_FMN_and_FAD_metabolism/FMN_to_FAD;seed:Riboflavin,_FMN_and_FAD_metabolism/GTP_and_Ribulose5P_to_Riboflavin;seed:Riboflavin,_FMN_and_FAD_metabolism/Riboflavin_to_FMN</html:p><html:p>XREFS: bigg:DB4PS;bigg:R_DB4PS;deprecated:MNXR115845;deprecated:MNXR55201;kegg:R07281;metacyc:DIOHBUTANONEPSYN-RXN;sabiork:9052;seed:rxn05040</html:p><html:p>GENE ASSOCIATION: (bact:RIBB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF 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reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ACGALtex</html:p><html:p>REACTION: MNXR95244</html:p><html:p>XREFS: bigg:ACGALtex;bigg:ACGALtlg;bigg:ACGALtly;bigg:R_ACGALtex;bigg:R_ACGALtlg;bigg:R_ACGALtly;deprecated:MNXR371;seed:rxn08037</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#fccac8f8-036e-478d-81fa-1da9c457a208"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95244"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACGALtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACGALtlg"/> - <rdf:li 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species="MNXM37__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM370__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__8" fbc:upperFluxBound="B_999999" id="R87714E78" metaid="_66ff1942-505d-4a00-97e9-1dd8207c5c3a" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_glc__D_e</html:p><html:p>REACTION: MNXR98569</html:p><html:p>XREFS: bigg:EX_glc__D_e;bigg:R_EX_glc__D_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: othr</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_66ff1942-505d-4a00-97e9-1dd8207c5c3a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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rdf:resource="http://identifiers.org/kegg.reaction/R01126"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-7607"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/124"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SURE_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM125__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM334__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R8799D61D" metaid="b07b8dd5-42fc-468d-8ab4-2ac53fccf5b5" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_TUNGSabcpp</html:p><html:p>REACTION: MNXR104978</html:p><html:p>CLASSIFICATION: 3.6.3.55</html:p><html:p>XREFS: rhea:35027#2;rhea:35028#2;rhea:35029#2;rhea:35030#2;bigg:R_TUNGSabcpp;bigg:TUNGSabcpp;deprecated:MNXR30173;deprecated:MNXR5162;deprecated:MNXR81147;metacyc:TRANS-RXN-242B;seed:rxn09333;seed:rxn13756</html:p><html:p>GENE ASSOCIATION: (bact:MODA_ECOLI and bact:MODB_ECOLI and bact:MODC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b07b8dd5-42fc-468d-8ab4-2ac53fccf5b5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104978"/> - <rdf:li 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species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM88308__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM88308__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R87F978DF" metaid="_678acf9b-dc2b-4166-ad9c-95343809a86b" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FDH5pp_1</html:p><html:p>REACTION: MNXR99481</html:p><html:p>CLASSIFICATION: 1.2.2.1</html:p><html:p>XREFS: 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reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PG180abcpp</html:p><html:p>REACTION: MNXR102521</html:p><html:p>XREFS: bigg:PG180abcpp;bigg:R_PG180abcpp;deprecated:MNXR4181;deprecated:MNXR69669;seed:rxn09090</html:p><html:p>GENE ASSOCIATION: (bact:MSBA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_454dd809-3284-4ec0-9fda-e81e8c22c085"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102521"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PG180abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PG180abcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_mal__L_e</html:p><html:p>REACTION: MNXR98731</html:p><html:p>XREFS: bigg:EX_mal__L_e;bigg:R_EX_mal__L_e;bigg:R_SK_mal__L_c;bigg:SK_mal__L_c</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_830b4a22-df11-44bd-84b7-0822cffe44b5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98731"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_mal__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_mal__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SK_mal__L_c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SK_mal__L_c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - 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sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ADSL1r</html:p><html:p>REACTION: MNXR95493</html:p><html:p>CLASSIFICATION: 4.3.2.2</html:p><html:p>PATHWAYS: kegg:Alanine, aspartate and glutamate metabolism;kegg:Metabolic pathways;kegg:Purine metabolism</html:p><html:p>XREFS: rhea:16853;rhea:16854;rhea:16855;rhea:16856;bigg:ADSL1r;bigg:R_ADSL1r;deprecated:MNXR514;kegg:R01083;sabiork:306</html:p><html:p>GENE ASSOCIATION: (bact:PUR8_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_61135e51-6942-446d-92af-7a4e61ca9f6d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95493"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.2"/> - <rdf:li 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<rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.22"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16645"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16646"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16647"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16648"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTE2x"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FACOAE160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PTE2x"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01274"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PALMITOYL-COA-HYDROLASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1490"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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bigg:EX_idon__L_e;bigg:R_EX_idon__L_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_52f7b9ff-2ee0-470f-aa4d-52d258679ed5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98674"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_idon__L_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_idon__L_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1565__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R8F25E376" metaid="_1490a7e5-0483-490d-822e-c072c8f05194" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CYStpp</html:p><html:p>REACTION: MNXR97029</html:p><html:p>XREFS: rhea:29655;rhea:29656;rhea:29657;rhea:29658;bigg:CYStec;bigg:CYStex;bigg:CYSth;bigg:CYStpp;bigg:R_CYStec;bigg:R_CYStex;bigg:R_CYSth;bigg:R_CYStpp;bigg:R_r1437;bigg:r1437;deprecated:MNXR1369;metacyc:RXN0-1924;sabiork:13465;seed:rxn08284;seed:rxn08286;seed:rxn10998</html:p><html:p>GENE ASSOCIATION: (bact:EAMA_ECOLI) or (bact:EAMB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1490a7e5-0483-490d-822e-c072c8f05194"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97029"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29655"/> - <rdf:li 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R_LPLIPAL2ATG141</html:p><html:p>REACTION: MNXR101178</html:p><html:p>XREFS: bigg:LPLIPAL2ATG141;bigg:R_LPLIPAL2ATG141</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#eba1aae4-3484-48d6-b3cd-32d54110c72d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101178"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL2ATG141"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL2ATG141"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2029__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3452__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM598__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7019__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R8FDD65E8" metaid="_30d65cb9-9b5c-4fc2-ab99-80a7f84c4a35" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_fe3_e</html:p><html:p>REACTION: MNXR98465</html:p><html:p>XREFS: bigg:EX_fe3_e;bigg:R_EX_fe3_e</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_30d65cb9-9b5c-4fc2-ab99-80a7f84c4a35"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98465"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe3_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_fe3_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM196__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R8FE74B72" metaid="be521c11-73c1-47ee-a079-2ff57f2ef89a" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GPDDA5pp</html:p><html:p>REACTION: MNXR100414</html:p><html:p>CLASSIFICATION: 3.1.4.44</html:p><html:p>XREFS: 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<speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM127__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM66__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R8FFFB956" metaid="fa09363b-45b6-4ac3-b5b2-b159d7ebcbb0" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_HIStex</html:p><html:p>REACTION: MNXR100649</html:p><html:p>XREFS: bigg:HIStex;bigg:HIStiDF;bigg:R_HIStex;bigg:R_HIStiDF;bigg:R_r1067;bigg:r1067;deprecated:MNXR2975;sabiork:13472;seed:rxn08721;seed:rxn10932</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM722721__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM481__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R94639FA4" metaid="_8a4e6035-d7d5-4b1d-a1fe-8db066a38539" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_TYRPpp</html:p><html:p>REACTION: MNXR104998</html:p><html:p>XREFS: rhea:30863;rhea:30864;rhea:30865;rhea:30866;bigg:R_TYRPpp;bigg:TYRPpp;deprecated:MNXR5175;metacyc:RXN-14534;sabiork:9571;seed:rxn09336</html:p><html:p>GENE ASSOCIATION: (bact:APHA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: 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id="R94786713" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_2AGPGAT161</html:p><html:p>GENE ASSOCIATION: (bact:AAS_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_AAS_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM162245__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3453__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM75101__64__MNXC3" 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species="MNXM925__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R952960B9" metaid="_6198ead7-2363-4481-ac43-0d479b560780" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DGSNtex</html:p><html:p>REACTION: MNXR97324</html:p><html:p>XREFS: bigg:DGSNt;bigg:DGSNtex;bigg:DGSNtm;bigg:R_DGSNt;bigg:R_DGSNtex;bigg:R_DGSNtm;deprecated:MNXR1528;seed:rxn08324</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6198ead7-2363-4481-ac43-0d479b560780"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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id="R973F82C0" metaid="f473046a-9dc2-4d39-a32c-efeb32732aaf" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ADA</html:p><html:p>REACTION: MNXR95432</html:p><html:p>CLASSIFICATION: 3.5.4.4</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Purine metabolism;metacyc:adenine and adenosine salvage III;metacyc:adenine and adenosine salvage V;metacyc:adenosine nucleotides degradation II;metacyc:purine ribonucleosides degradation;seed:Purine_conversions;seed:Purine_conversions/AMP_to_ADP;seed:Purine_conversions/AMP_to_Hypoxanthine;seed:Purine_conversions/GDP_to_GTP;seed:Purine_conversions/GMP_to_GDP;seed:Purine_conversions/GMP_to_Guanine;seed:Purine_conversions/IMP_to_AMP;seed:Purine_conversions/IMP_to_GMP;seed:Purine_conversions/IMP_to_Hypoxanthine;seed:Purine_conversions/dADP_to_dAMP;seed:Purine_conversions/dGDP_to_dGMP</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/bigg.reaction/3HAD160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/3HAD160_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3HAD160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_3HAD160_1"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04544"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FABA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FABZ_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2576__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM29072__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R9BAE8810" metaid="ea3c2eee-b658-48f4-998e-2f6bbbb8e659" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_N2Otex</html:p><html:p>REACTION: MNXR101797</html:p><html:p>XREFS: bigg:N2Otex;bigg:N2Otpp;bigg:R_N2Otex;bigg:R_N2Otpp;deprecated:MNXR3685;seed:rxn08966;seed:rxn08967</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ea3c2eee-b658-48f4-998e-2f6bbbb8e659"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101797"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/N2Otex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/N2Otpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_N2Otex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_N2Otpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM579__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM579__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R9BC76DE6" metaid="_23eaf73c-2add-46d4-95ca-2c03b460eaee" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3OAS160</html:p><html:p>REACTION: MNXR109257</html:p><html:p>CLASSIFICATION: 2.3.1.-;2.3.1.179;2.3.1.180;2.3.1.41;2.3.1.85;2.3.1.86</html:p><html:p>PATHWAYS: kegg:Fatty acid biosynthesis;kegg:Fatty acid metabolism;kegg:Metabolic pathways;metacyc:palmitate biosynthesis II (bacteria and plants);seed:Fatty_Acid_Biosynthesis_FASII;seed:Fatty_Acid_Biosynthesis_FASII/AcetylCoA_to_MalonylCoA</html:p><html:p>XREFS: deprecated:MNXR36129;deprecated:MNXR37885;deprecated:MNXR68195;deprecated:MNXR77861;deprecated:MNXR81383;kegg:R04968;metacyc:RXN-9539;sabiork:4606;seed:rxn05344</html:p><html:p>GENE ASSOCIATION: (bact:FABB_ECOLI) or (bact:FABF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: 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</rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FABB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FABF_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM184__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM564__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4345__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM925__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R9BD4A19A" metaid="_171ac425-b674-42a3-ac8a-36fe8b48e04c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MOAT</html:p><html:p>REACTION: MNXR101683</html:p><html:p>CLASSIFICATION: 2.4.99.12</html:p><html:p>PATHWAYS: kegg:Lipopolysaccharide biosynthesis;kegg:Metabolic pathways;metacyc:Kdo transfer to lipid IVA I;metacyc:Kdo transfer to lipid IVA II;seed:KDO2-Lipid_A_biosynthesis;seed:KDO2-Lipid_A_biosynthesis/Arabinose5P_and_UDP_N_acetylglucosamine_to_KDO2_Lipid_A;seed:KDO2-Lipid_A_biosynthesis/Ribulose5P_to_Arabinose5P</html:p><html:p>XREFS: rhea:28066;rhea:28067;rhea:28068;rhea:28069;bigg:MOAT;bigg:R_MOAT;deprecated:MNXR3619;kegg:R04658;metacyc:KDOTRANS-RXN;seed:rxn03182</html:p><html:p>GENE ASSOCIATION: (bact:KDTA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_171ac425-b674-42a3-ac8a-36fe8b48e04c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101683"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.99.12"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28066"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28067"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28068"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28069"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MOAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MOAT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04658"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:KDOTRANS-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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<listOfReactants> - <speciesReference constant="true" species="MNXM5481__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM5481__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="R9BF27750" metaid="_815d4ee3-3d1e-4f58-a292-212f16042162" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARBt2rpp</html:p><html:p>REACTION: MNXR126356</html:p><html:p>XREFS: rhea:28951;rhea:28952;rhea:28953;rhea:28954;bigg:ARBt2r;bigg:ARBt2rpp;bigg:R_ARBt2r;bigg:R_ARBt2rpp;deprecated:MNXR775;deprecated:MNXR90739;deprecated:MNXR95936;metacyc:TRANS-RXN-10;seed:rxn05500;seed:rxn08140</html:p><html:p>GENE ASSOCIATION: (bact:ARAE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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<fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ARAE_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM461__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM461__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R9BFB3DF2" metaid="_3e2e4d2e-e9c0-49af-925d-7e1e4c5e7c4a" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARBTNtex</html:p><html:p>REACTION: MNXR95929</html:p><html:p>XREFS: bigg:ARBTNtex;bigg:R_ARBTNtex;deprecated:MNXR50783;seed:rxn08148</html:p><html:p>PROP BC-p: 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xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_TPIS_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM74__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM77__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="R9FFDBC0B" metaid="_32ef8fd5-5a25-4b73-bb35-ae8845e64f5b" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MALTPTabcpp</html:p><html:p>REACTION: MNXR138568</html:p><html:p>XREFS: bigg:MALTPTabc;bigg:MALTPTabcpp;bigg:R_MALTPTabc;bigg:R_MALTPTabcpp;deprecated:MNXR101355;deprecated:MNXR3396;deprecated:MNXR69394;deprecated:MNXR83274;seed:rxn08871;seed:rxn10172</html:p><html:p>GENE ASSOCIATION: (bact:MALE_ECOLI and bact:MALF_ECOLI and bact:MALG_ECOLI and bact:MALK_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_32ef8fd5-5a25-4b73-bb35-ae8845e64f5b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138568"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALTPTabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALTPTabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MALTPTabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MALTPTabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_MALE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MALF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MALG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MALK_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61032__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61032__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RA0336135_1" metaid="_50de0a30-2918-4ac4-8186-7160c44e222d" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GLCtex_copy1;R_GLCtex_copy2</html:p><html:p>REACTION: MNXR100188</html:p><html:p>XREFS: bigg:GLCMter;bigg:GLCt1;bigg:GLCter;bigg:GLCtex;bigg:GLCtg;bigg:GLCtly;bigg:GLCtv;bigg:R_GLCMter;bigg:R_GLCt1;bigg:R_GLCter;bigg:R_GLCtex;bigg:R_GLCtg;bigg:R_GLCtly;bigg:R_GLCtv;deprecated:MNXR2651;deprecated:MNXR94191;sabiork:601;sabiork:7002;seed:rxn08617;seed:rxn09679;seed:rxn09875</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_50de0a30-2918-4ac4-8186-7160c44e222d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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- <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCtv"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/601"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7002"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM41__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM41__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_0" id="RA0336135_2" metaid="d1e60dfc-c050-4071-8c74-a05a1f3d9b29" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GLCtex_copy1;R_GLCtex_copy2</html:p><html:p>REACTION: MNXR100188</html:p><html:p>XREFS: bigg:GLCMter;bigg:GLCt1;bigg:GLCter;bigg:GLCtex;bigg:GLCtg;bigg:GLCtly;bigg:GLCtv;bigg:R_GLCMter;bigg:R_GLCt1;bigg:R_GLCter;bigg:R_GLCtex;bigg:R_GLCtg;bigg:R_GLCtly;bigg:R_GLCtv;deprecated:MNXR2651;deprecated:MNXR94191;sabiork:601;sabiork:7002;seed:rxn08617;seed:rxn09679;seed:rxn09875</html:p><html:p>GENE ASSOCIATION: (bact:LAMB_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d1e60dfc-c050-4071-8c74-a05a1f3d9b29"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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- <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCtv"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/601"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7002"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LAMB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM41__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM41__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA0521556" metaid="_9266076b-f9f0-4aff-9f0f-b3731cbfbf64" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DURIt2pp</html:p><html:p>REACTION: MNXR97820</html:p><html:p>XREFS: rhea:29967;rhea:29968;rhea:29969;rhea:29970;bigg:DURIt2;bigg:DURIt2pp;bigg:R_DURIt2;bigg:R_DURIt2pp;deprecated:MNXR1815;metacyc:TRANS-RXN-108F;seed:rxn08376;seed:rxn09685</html:p><html:p>GENE ASSOCIATION: (bact:NUPC_ECOLI) or (bact:NUPG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9266076b-f9f0-4aff-9f0f-b3731cbfbf64"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97820"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29967"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29968"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29969"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29970"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DURIt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DURIt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DURIt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DURIt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108F"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_NUPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUPG_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM492__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM492__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA0A5BA01" metaid="d5f96909-7ade-491e-961e-722003a16d8f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_TMAOR2</html:p><html:p>REACTION: MNXR104880</html:p><html:p>XREFS: rhea:30583;rhea:30584;rhea:30585;rhea:30586;bigg:R_TMAOR2;bigg:TMAOR2;deprecated:MNXR136000;deprecated:MNXR26771;seed:rxn09315</html:p><html:p>GENE ASSOCIATION: (bact:DMSA_ECOLI and bact:DMSB_ECOLI and bact:DMSC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d5f96909-7ade-491e-961e-722003a16d8f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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<fbc:geneProductRef fbc:geneProduct="G_FABI_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5958__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89950__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA49CA54F" metaid="_616c4305-552c-4f57-b9f3-6b1e5eee8283" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NTD3</html:p><html:p>REACTION: MNXR102033</html:p><html:p>CLASSIFICATION: 3.1.3.5;3.1.3.89</html:p><html:p>PATHWAYS: kegg:Pyrimidine 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id="RA6043DA1" metaid="_9857af3e-561e-4e70-8259-269fe885116c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CYANST</html:p><html:p>REACTION: MNXR138187</html:p><html:p>CLASSIFICATION: 2.8.1.1</html:p><html:p>PATHWAYS: kegg:Microbial metabolism in diverse environments;kegg:Sulfur metabolism;metacyc:thiosulfate disproportionation IV (rhodanese);seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerol3P_to_GlyceroneP;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerol_to_GlyceroneP;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerophosphocholine_to_GlyceroneP_and_Choline;seed:Glycerol_and_Glycerol-3-phosphate_Uptake_and_Utilization/Glycerophosphoethanolamine_to_GlyceroneP_and_Ethanolamine</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/rhea/16883"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16884"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYANST"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYANSTm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYANSTpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYANST"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYANSTm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYANSTpp"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01931"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:THIOSULFATE-SULFURTRANSFERASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7692"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GLPE_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM254__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM323__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM105630__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM762__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RA629144B" metaid="d01b8839-a8bc-463a-87b5-b4e444845e2e" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_H2tpp</html:p><html:p>REACTION: MNXR100495</html:p><html:p>XREFS: bigg:H2td;bigg:H2tex;bigg:H2th;bigg:H2tm;bigg:H2tpp;bigg:R_H2td;bigg:R_H2tex;bigg:R_H2th;bigg:R_H2tm;bigg:R_H2tpp;deprecated:MNXR55614;deprecated:MNXR69200;seed:rxn08691;seed:rxn08692;seed:rxn10542</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d01b8839-a8bc-463a-87b5-b4e444845e2e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100495"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2td"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2th"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2td"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2th"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2tpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SPONTANEOUS"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM195__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM195__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA653A78A" metaid="ba838b2d-3bc7-4709-8a62-96d20e511107" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DOGULNR</html:p><html:p>REACTION: MNXR97688</html:p><html:p>CLASSIFICATION: 1.1.1.130</html:p><html:p>PATHWAYS: kegg:Ascorbate and aldarate metabolism;kegg:Pentose and glucuronate interconversions;metacyc:L-ascorbate degradation II (bacterial, aerobic);seed:L-ascorbate_utilization_(and_related_gene_clusters);seed:L-ascorbate_utilization_(and_related_gene_clusters)/Ascorbate6P_to_Xylulose5P</html:p><html:p>XREFS: rhea:21924;rhea:21925;rhea:21926;rhea:21927;bigg:DOGULNR;bigg:R_DOGULNR;deprecated:MNXR1722;kegg:R02637;metacyc:RXN0-703;seed:rxn01911</html:p><html:p>GENE ASSOCIATION: (bact:DLGD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ba838b2d-3bc7-4709-8a62-96d20e511107"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97688"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.130"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21924"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21925"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21926"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21927"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DOGULNR"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DOGULNR"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02637"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-703"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_DLGD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM958__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM736__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RA65969D1" metaid="_28f8e7e3-1262-4306-9e28-d35a345b0011" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_O2tex</html:p><html:p>REACTION: MNXR102090</html:p><html:p>XREFS: bigg:O2t;bigg:O2ter;bigg:O2tex;bigg:O2thr;bigg:O2tm;bigg:O2tn;bigg:O2tp;bigg:O2tpp;bigg:O2trhu;bigg:O2tu;bigg:R_O2t;bigg:R_O2ter;bigg:R_O2tex;bigg:R_O2thr;bigg:R_O2tm;bigg:R_O2tn;bigg:R_O2tp;bigg:R_O2tpp;bigg:R_O2trhu;bigg:R_O2tu;deprecated:MNXR3931;deprecated:MNXR66722;metacyc:TRANS-RXN0-474;seed:rxn05468;seed:rxn09031;seed:rxn09032;seed:rxn09641;seed:rxn09734</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_28f8e7e3-1262-4306-9e28-d35a345b0011"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2ter"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2thr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2trhu"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tu"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2ter"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2thr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2trhu"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O2tu"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-474"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM4__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM4__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__18_5" fbc:upperFluxBound="B_999999" id="RA65CB13F" metaid="e4e7c0e5-c0a4-4e03-86d5-756b4bd7a5f6" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_o2_e</html:p><html:p>REACTION: MNXR98799</html:p><html:p>XREFS: bigg:EX_o2_e;bigg:R_EX_o2_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: othr</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e4e7c0e5-c0a4-4e03-86d5-756b4bd7a5f6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98799"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_o2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_o2_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM4__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA6637795" metaid="f9919e17-a202-44ce-9ab6-9895aa1258b2" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_for_e</html:p><html:p>REACTION: MNXR98490</html:p><html:p>XREFS: bigg:EX_for_e;bigg:R_EX_for_e;bigg:R_SK_for_c;bigg:SK_for_c</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f9919e17-a202-44ce-9ab6-9895aa1258b2"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98490"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_for_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_for_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SK_for_c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SK_for_c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM39__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA67DB7C7" metaid="_452f2f74-b12a-4bfe-8b6c-4d53533cafc6" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_O16AP2pp</html:p><html:p>REACTION: MNXR138661</html:p><html:p>XREFS: bigg:O16AP2pp;bigg:R_O16AP2pp;deprecated:MNXR102079;deprecated:MNXR55799;deprecated:MNXR69572</html:p><html:p>GENE ASSOCIATION: (bact:RFC_ECOLI and bact:WZZB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_452f2f74-b12a-4bfe-8b6c-4d53533cafc6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138661"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O16AP2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_O16AP2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_RFC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_WZZB_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM31520__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM65211__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM31521__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5043__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA6997CA9" metaid="_59feb4df-7ba8-42df-b1ee-32898b96c59f" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_TAURabcpp</html:p><html:p>REACTION: MNXR104732</html:p><html:p>CLASSIFICATION: 3.6.3.36</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/rhea/14616#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_TAURabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_TAURabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TAURabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TAURabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:3.6.3.36-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-64-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_TAUA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TAUB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_TAUC_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM282__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM282__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA6AD3DDA" metaid="ce1b3b41-dfad-4c08-a810-7338f4b7f862" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FACOAE141</html:p><html:p>REACTION: MNXR99130</html:p><html:p>XREFS: bigg:FACOAE141;bigg:R_FACOAE141;deprecated:MNXR55340</html:p><html:p>GENE ASSOCIATION: (bact:TESB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ce1b3b41-dfad-4c08-a810-7338f4b7f862"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99130"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FACOAE141"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FACOAE141"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_TESB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2290__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM641__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RA6E23FBB" metaid="_1019017c-4c22-4bff-96cc-14eccf49949d" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GARFT</html:p><html:p>REACTION: MNXR99623</html:p><html:p>CLASSIFICATION: 2.1.2.2</html:p><html:p>XREFS: rhea:15053;rhea:15054;rhea:15055;rhea:15056;bigg:FPGFTh;bigg:FPGFTm;bigg:GARFT;bigg:R_FPGFTh;bigg:R_FPGFTm;bigg:R_GARFT;deprecated:MNXR2551</html:p><html:p>GENE ASSOCIATION: (bact:PUR3_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1019017c-4c22-4bff-96cc-14eccf49949d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99623"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15053"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15054"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15055"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/15056"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FPGFTh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FPGFTm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GARFT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FPGFTh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FPGFTm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GARFT"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PUR3_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM453__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM79__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM237__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM463__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA6FA6E9" metaid="a7578c9e-ae8e-43b3-9219-9a94b295b97b" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_fe3hox_un_e</html:p><html:p>REACTION: MNXR98470</html:p><html:p>XREFS: bigg:EX_fe3hox_un_e;bigg:R_EX_fe3hox_un_e;deprecated:MNXR82518</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a7578c9e-ae8e-43b3-9219-9a94b295b97b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98470"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_fe3hox_un_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_fe3hox_un_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM90823__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA70C4A2F_1" metaid="_1c5da2ac-9378-4924-bd52-d5002892f292" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ATPM</html:p><html:p>REACTION: MNXR96131</html:p><html:p>CLASSIFICATION: 3.6.1.15;3.6.1.3;3.6.1.5;3.6.1.8;3.6.3.1;3.6.3.10;3.6.3.11;3.6.3.12;3.6.3.14;3.6.3.15;3.6.3.16;3.6.3.17;3.6.3.18;3.6.3.19;3.6.3.2;3.6.3.20;3.6.3.21;3.6.3.22;3.6.3.23;3.6.3.24;3.6.3.25;3.6.3.26;3.6.3.27;3.6.3.28;3.6.3.29;3.6.3.3;3.6.3.30;3.6.3.31;3.6.3.32;3.6.3.33;3.6.3.34;3.6.3.35;3.6.3.36;3.6.3.37;3.6.3.38;3.6.3.39;3.6.3.4;3.6.3.40;3.6.3.41;3.6.3.42;3.6.3.43;3.6.3.44;3.6.3.46;3.6.3.47;3.6.3.48;3.6.3.49;3.6.3.5;3.6.3.50;3.6.3.51;3.6.3.52;3.6.3.53;3.6.3.54;3.6.3.6;3.6.3.7;3.6.3.8;3.6.3.9;3.6.4.1;3.6.4.10;3.6.4.11;3.6.4.12;3.6.4.13;3.6.4.2;3.6.4.3;3.6.4.4;3.6.4.5;3.6.4.6;3.6.4.7;3.6.4.8;3.6.4.9</html:p><html:p>PATHWAYS: kegg:Purine metabolism;metacyc:APYRASE-RXN</html:p><html:p>XREFS: rhea:13065;rhea:13066;rhea:13067;rhea:13068;bigg:ATPM;bigg:ATPPHm;bigg:ATPS;bigg:NTP1;bigg:R_ATPM;bigg:R_ATPPHm;bigg:R_ATPS;bigg:R_NTP1;deprecated:MNXR80665;deprecated:MNXR892;kegg:R00086;metacyc:ATPASE-RXN;sabiork:75;seed:rxn00062;seed:rxn09694;seed:rxn11300</html:p><html:p>GENE ASSOCIATION: (bact:HSCC_ECOLI) or (bact:RSGA_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1c5da2ac-9378-4924-bd52-d5002892f292"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96131"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.3"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.5"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.8"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.1"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.10"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.11"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.12"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.14"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.15"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.16"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.17"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.18"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.19"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.2"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.20"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.22"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.23"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.24"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.25"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.26"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.27"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.28"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.29"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.3"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.30"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.32"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.33"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.34"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.35"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.36"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.37"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.38"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.39"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.4"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.40"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.41"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.42"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.43"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.44"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.46"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.47"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.48"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.49"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.5"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.50"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.51"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.52"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.53"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.54"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.6"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.7"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.8"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.9"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.1"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.10"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.11"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.12"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.13"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.2"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.3"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.4"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.5"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.6"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.7"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.8"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.4.9"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13065"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13066"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13067"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13068"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPM"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPPHm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTP1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPM"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPPHm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTP1"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00086"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATPASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/75"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_HSCC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RSGA_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_8_39" fbc:upperFluxBound="B_8_39" id="RA70C4A2F_2" metaid="_759f9e20-aaad-4f07-a892-cb7ec1a9b688" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ATPM</html:p><html:p>REACTION: MNXR96131</html:p><html:p>CLASSIFICATION: 3.6.1.15;3.6.1.3;3.6.1.5;3.6.1.8;3.6.3.1;3.6.3.10;3.6.3.11;3.6.3.12;3.6.3.14;3.6.3.15;3.6.3.16;3.6.3.17;3.6.3.18;3.6.3.19;3.6.3.2;3.6.3.20;3.6.3.21;3.6.3.22;3.6.3.23;3.6.3.24;3.6.3.25;3.6.3.26;3.6.3.27;3.6.3.28;3.6.3.29;3.6.3.3;3.6.3.30;3.6.3.31;3.6.3.32;3.6.3.33;3.6.3.34;3.6.3.35;3.6.3.36;3.6.3.37;3.6.3.38;3.6.3.39;3.6.3.4;3.6.3.40;3.6.3.41;3.6.3.42;3.6.3.43;3.6.3.44;3.6.3.46;3.6.3.47;3.6.3.48;3.6.3.49;3.6.3.5;3.6.3.50;3.6.3.51;3.6.3.52;3.6.3.53;3.6.3.54;3.6.3.6;3.6.3.7;3.6.3.8;3.6.3.9;3.6.4.1;3.6.4.10;3.6.4.11;3.6.4.12;3.6.4.13;3.6.4.2;3.6.4.3;3.6.4.4;3.6.4.5;3.6.4.6;3.6.4.7;3.6.4.8;3.6.4.9</html:p><html:p>PATHWAYS: kegg:Purine metabolism;metacyc:APYRASE-RXN</html:p><html:p>XREFS: rhea:13065;rhea:13066;rhea:13067;rhea:13068;bigg:ATPM;bigg:ATPPHm;bigg:ATPS;bigg:NTP1;bigg:R_ATPM;bigg:R_ATPPHm;bigg:R_ATPS;bigg:R_NTP1;deprecated:MNXR80665;deprecated:MNXR892;kegg:R00086;metacyc:ATPASE-RXN;sabiork:75;seed:rxn00062;seed:rxn09694;seed:rxn11300</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_759f9e20-aaad-4f07-a892-cb7ec1a9b688"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96131"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.3"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.5"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.8"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.1"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.10"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.11"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.12"/> - <rdf:li 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rdf:resource="http://identifiers.org/biocyc/META:P-PANTOCYSLIG-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/3942"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_COABC_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM415__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM55__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM63__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM31__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM483__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA8B91E64" metaid="_1117efaf-34d5-49f0-bbad-ab3440459d09" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_h2o2_e</html:p><html:p>REACTION: MNXR98640</html:p><html:p>XREFS: bigg:EX_h2o2_e;bigg:H2O2t;bigg:H2O2ter;bigg:H2O2tex;bigg:H2O2tly;bigg:H2O2tm;bigg:H2O2tn;bigg:H2O2tp;bigg:R_EX_h2o2_e;bigg:R_H2O2t;bigg:R_H2O2ter;bigg:R_H2O2tex;bigg:R_H2O2tly;bigg:R_H2O2tm;bigg:R_H2O2tn;bigg:R_H2O2tp;deprecated:MNXR2864;metacyc:TRANS-RXN-284;metacyc:TRANS-RXN0-572;reactome:R-HSA-3779381;reactome:R-RNO-3779389;seed:rxn08685;seed:rxn13308</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1117efaf-34d5-49f0-bbad-ab3440459d09"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98640"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2o2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2ter"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tly"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2O2tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_h2o2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2ter"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2tly"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2O2tp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-284"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-572"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-3779381"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-3779389"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM22__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA8DA4257" metaid="f89edb9e-4953-4217-bad9-8afda309c0f7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2ATE141</html:p><html:p>REACTION: MNXR101171</html:p><html:p>XREFS: bigg:LPLIPAL2ATE141;bigg:R_LPLIPAL2ATE141</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f89edb9e-4953-4217-bad9-8afda309c0f7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101171"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL2ATE141"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL2ATE141"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2029__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3447__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM368__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7019__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA8E9C036" metaid="f4b62a34-ae26-465b-966b-cb36c9674da4" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_pppn_e</html:p><html:p>REACTION: MNXR98862</html:p><html:p>XREFS: bigg:EX_pppn_e;bigg:R_EX_pppn_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f4b62a34-ae26-465b-966b-cb36c9674da4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98862"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_pppn_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_pppn_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1403__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA8F96EB9" metaid="bc8dd3bb-c22c-48e7-8dd8-b0bb28e1acca" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_HYD1pp</html:p><html:p>REACTION: MNXR100753</html:p><html:p>XREFS: rhea:29059#1;rhea:29060#1;rhea:29061#1;rhea:29062#1;bigg:HYD1;bigg:HYD1pp;bigg:R_HYD1;bigg:R_HYD1pp;deprecated:MNXR55641;deprecated:MNXR69266;seed:rxn08734;seed:rxn10118</html:p><html:p>GENE ASSOCIATION: (bact:CYBH_ECOLI and bact:MBHL_ECOLI and bact:MBHS_ECOLI) or (bact:HYCB_ECOLI and bact:HYCC_ECOLI and bact:HYCD_ECOLI and bact:HYCE_ECOLI and bact:HYCF_ECOLI and bact:HYCG_ECOLI) or (bact:MBHM_ECOLI and bact:MBHT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bc8dd3bb-c22c-48e7-8dd8-b0bb28e1acca"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100753"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29059#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29060#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29061#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29062#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HYD1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HYD1pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HYD1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HYD1pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CYBH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MBHL_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MBHS_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_HYCB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HYCC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HYCD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HYCE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HYCF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HYCG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_MBHM_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MBHT_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM195__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM232__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM191__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RA8F9802D" metaid="d490d8ef-2500-4781-a13f-6ee9fd1635d8" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AOTA</html:p><html:p>REACTION: MNXR95388</html:p><html:p>CLASSIFICATION: 2.6.1.11</html:p><html:p>PATHWAYS: kegg:2-Oxocarboxylic acid metabolism;kegg:Arginine biosynthesis;kegg:Biosynthesis of amino acids;kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Metabolic pathways;metacyc:L-arginine biosynthesis II (acetyl cycle);metacyc:L-arginine biosynthesis III (via N-acetyl-L-citrulline);metacyc:L-ornithine biosynthesis I;seed:Arginine_Biosynthesis_extended;seed:Arginine_Biosynthesis_extended/Glutamate_to_Arginine</html:p><html:p>XREFS: rhea:18049;rhea:18050;rhea:18051;rhea:18052;bigg:ACOTA;bigg:ACOTAim;bigg:AOTA;bigg:R_ACOTA;bigg:R_ACOTAim;bigg:R_AOTA;deprecated:MNXR30610;kegg:R02283;metacyc:ACETYLORNTRANSAM-RXN;sabiork:2248;seed:rxn01637</html:p><html:p>GENE ASSOCIATION: (bact:ARGD_ECOLI) or (bact:ASTC_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: 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rdf:resource="http://identifiers.org/bigg.reaction/R_ACOTAim"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AOTA"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02283"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ACETYLORNTRANSAM-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/2248"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_ARGD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ASTC_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1062__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM20__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM817__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA91CAAEA" metaid="_5c28f6a4-8a40-402e-a370-5aacc2ef24e7" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_TSULabcpp</html:p><html:p>REACTION: MNXR104964</html:p><html:p>CLASSIFICATION: 3.6.3.25</html:p><html:p>XREFS: rhea:29871#1;rhea:29872#1;rhea:29873#1;rhea:29874#1;bigg:R_TSULabc;bigg:R_TSULabcpp;bigg:TSULabc;bigg:TSULabcpp;metacyc:ABC-7-RXN;seed:rxn05176;seed:rxn09329</html:p><html:p>GENE ASSOCIATION: (bact:CYSA_ECOLI and bact:CYSP_ECOLI and bact:CYST_ECOLI and bact:CYSW_ECOLI) or (bact:CYSA_ECOLI and bact:CYST_ECOLI and bact:CYSW_ECOLI and bact:SUBI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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fbc:upperFluxBound="B_999999" id="RA9C56CEF" metaid="_1db4800d-9321-4af0-83e1-4d3e5d6bdea5" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PGPP160</html:p><html:p>REACTION: MNXR102563</html:p><html:p>CLASSIFICATION: 3.1.3.27</html:p><html:p>XREFS: bigg:PGPP160;bigg:PGPP160pp;bigg:R_PGPP160;bigg:R_PGPP160pp;deprecated:MNXR4207;deprecated:MNXR69683;seed:rxn09104</html:p><html:p>GENE ASSOCIATION: (bact:PGPA_ECOLI) or (bact:PGPB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1db4800d-9321-4af0-83e1-4d3e5d6bdea5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102563"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> - <rdf:li 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species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RA9FD2A15" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FACOAL60t2pp</html:p><html:p>GENE ASSOCIATION: (bact:FADK_ECOLI) or (bact:LCFA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FADK_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LCFA_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1653__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM553__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAA59B1A1" metaid="f9d4b276-fbab-4cc1-8791-a65292382644" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NTD2</html:p><html:p>REACTION: MNXR102032</html:p><html:p>CLASSIFICATION: 3.1.3.5</html:p><html:p>PATHWAYS: kegg:Pyrimidine metabolism;metacyc:UTP and CTP dephosphorylation I;metacyc:tunicamycin biosynthesis;seed:pyrimidine_conversions;seed:pyrimidine_conversions/CMP_to_Uracil;seed:pyrimidine_conversions/CTP_to_CMP;seed:pyrimidine_conversions/UMP_to_Uracil;seed:pyrimidine_conversions/UTP_to_CTP;seed:pyrimidine_conversions/dCMP_to_dTMP;seed:pyrimidine_conversions/dCTP_to_dCMP;seed:pyrimidine_conversions/dTMP_to_Thymine;seed:pyrimidine_conversions/dTMP_to_dTTP</html:p><html:p>XREFS: rhea:29359;rhea:29360;rhea:29361;rhea:29362;bigg:NTD2;bigg:NTD2e;bigg:NTD2l;bigg:NTD2m;bigg:NTD2pp;bigg:R_NTD2;bigg:R_NTD2e;bigg:R_NTD2l;bigg:R_NTD2m;bigg:R_NTD2pp;deprecated:MNXR3875;kegg:R00963;metacyc:RXN-14025;sabiork:210;seed:rxn00708</html:p><html:p>GENE ASSOCIATION: (bact:SURE_ECOLI) or (bact:YJJG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f9d4b276-fbab-4cc1-8791-a65292382644"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102032"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29359"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29360"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29361"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29362"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD2e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD2l"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD2e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD2l"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD2pp"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00963"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14025"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/210"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_SURE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YJJG_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM80__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM288__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAA5AED5C" metaid="e310263a-a5d2-4262-b7a0-6792a63c9ce1" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_HCYSMT2</html:p><html:p>REACTION: MNXR138507</html:p><html:p>CLASSIFICATION: 2.1.1.10</html:p><html:p>PATHWAYS: metacyc:L-methionine biosynthesis II;metacyc:L-methionine salvage from L-homocysteine;metacyc:S-methyl-L-methionine cycle</html:p><html:p>XREFS: rhea:26337;rhea:26338;rhea:26339;rhea:26340;bigg:HCYSMT2;bigg:R_HCYSMT2;deprecated:MNXR2930;deprecated:MNXR69220;kegg:R11063;metacyc:MMUM-RXN;sabiork:13306</html:p><html:p>GENE ASSOCIATION: (bact:MMUM_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e310263a-a5d2-4262-b7a0-6792a63c9ce1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138507"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.10"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/26337"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/26338"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/26339"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/26340"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HCYSMT2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HCYSMT2"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R11063"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:MMUM-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/13306"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MMUM_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1119__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM114070__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM61__64__MNXC3" stoichiometry="2"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAA806F63" metaid="_583b7fe3-2940-4952-ade4-edce32852de7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MDDCP4pp</html:p><html:p>REACTION: MNXR101432</html:p><html:p>CLASSIFICATION: 3.4.16.4</html:p><html:p>XREFS: bigg:MDDCP4ex;bigg:MDDCP4pp;bigg:R_MDDCP4ex;bigg:R_MDDCP4pp;deprecated:MNXR3457;deprecated:MNXR69421;deprecated:MNXR83291;seed:rxn08893</html:p><html:p>GENE ASSOCIATION: (bact:DACA_ECOLI) or (bact:DACB_ECOLI) or (bact:DACC_ECOLI) or (bact:DACD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_583b7fe3-2940-4952-ade4-edce32852de7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101432"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDDCP4ex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDDCP4pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MDDCP4ex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MDDCP4pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_DACA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DACB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DACC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DACD_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5971__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM156__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM88347__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAA82755" metaid="ba184008-a904-4b9d-a73e-88aa3cf8b49c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_BPNT</html:p><html:p>REACTION: MNXR96321</html:p><html:p>CLASSIFICATION: 3.1.3.7;3.1.3.97</html:p><html:p>PATHWAYS: seed:Inorganic_Sulfur_Assimilation;seed:Inorganic_Sulfur_Assimilation/Sulfate_to_Sulfide</html:p><html:p>XREFS: rhea:10040;rhea:10041;rhea:10042;rhea:10043;bigg:BPNT;bigg:R_BPNT;deprecated:MNXR80687;deprecated:MNXR965;kegg:R00188;metacyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN;sabiork:736;seed:rxn00137;seed:rxn11357</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ba184008-a904-4b9d-a73e-88aa3cf8b49c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96321"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.7"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.97"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10040"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10041"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10042"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/10043"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/BPNT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_BPNT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00188"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:325-BISPHOSPHATE-NUCLEOTIDASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/736"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM45__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAA978D7B" metaid="_1e92dfd6-dec9-4588-95b4-afb436d52fe7" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_aso3_e</html:p><html:p>REACTION: MNXR98293</html:p><html:p>XREFS: bigg:EX_aso3_e;bigg:R_EX_aso3_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1e92dfd6-dec9-4588-95b4-afb436d52fe7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98293"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_aso3_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_aso3_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM658__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAAAE22F1" metaid="e7a38ec2-558d-4e23-bb04-e3689bd0e1d0" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_h2s_e</html:p><html:p>REACTION: MNXR98642</html:p><html:p>XREFS: bigg:EX_h2s_e;bigg:R_EX_h2s_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e7a38ec2-558d-4e23-bb04-e3689bd0e1d0"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98642"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_h2s_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_h2s_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM89582__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RAABA3DE6" metaid="a876ad44-4d03-45bf-9a2b-bd2d6707f2ac" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PPALtpp</html:p><html:p>REACTION: MNXR103071</html:p><html:p>XREFS: bigg:PPALtex;bigg:PPALtpp;bigg:R_PPALtex;bigg:R_PPALtpp;deprecated:MNXR4376;seed:rxn09169;seed:rxn09170</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a876ad44-4d03-45bf-9a2b-bd2d6707f2ac"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103071"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPALtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PPALtpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PPALtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PPALtpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM821__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM821__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAAFC24C5" metaid="_0641421b-b46b-459a-b85e-5782ef1ab2fd" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_4PEPTabcpp</html:p><html:p>REACTION: MNXR95050</html:p><html:p>XREFS: bigg:4PEPTabcpp;bigg:R_4PEPTabcpp;deprecated:MNXR255;deprecated:MNXR68218;seed:rxn08008</html:p><html:p>GENE ASSOCIATION: (bact:OPPA_ECOLI and bact:OPPB_ECOLI and bact:OPPC_ECOLI and bact:OPPD_ECOLI and bact:OPPF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0641421b-b46b-459a-b85e-5782ef1ab2fd"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95050"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4PEPTabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_4PEPTabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_OPPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OPPF_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM59271__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM59271__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RAB1B7609" metaid="_1d1be862-f87d-4e68-a278-b2a7993c32d7" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_AKGtex</html:p><html:p>REACTION: MNXR95663</html:p><html:p>XREFS: bigg:AKGtex;bigg:AKGtp;bigg:R_AKGtex;bigg:R_AKGtp;deprecated:MNXR601;sabiork:13794;seed:rxn08096;seed:rxn10923;seed:rxn13220</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1d1be862-f87d-4e68-a278-b2a7993c32d7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95663"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AKGtp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AKGtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AKGtp"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/13794"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM20__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM20__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAB251288" metaid="_51768e5d-4690-4345-829c-1866be5f6f83" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_IDOND2</html:p><html:p>REACTION: MNXR100802</html:p><html:p>CLASSIFICATION: 1.1.1.264</html:p><html:p>PATHWAYS: 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rdf:resource="http://identifiers.org/rhea/21177"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21178"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21179"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/IDOND2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_IDOND2"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05684"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:L-IDONATE-2-DEHYDROGENASE-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_IDND_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM963__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1565__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAB311DE2" metaid="_3c292f06-9449-4b48-b500-bc138455e65e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CHORS</html:p><html:p>REACTION: MNXR96709</html:p><html:p>CLASSIFICATION: 4.2.3.5</html:p><html:p>PATHWAYS: kegg:Biosynthesis of amino acids;kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Metabolic pathways;kegg:Phenylalanine, tyrosine and tryptophan biosynthesis;metacyc:chorismate biosynthesis from 3-dehydroquinate;seed:Chorismate_Synthesis;seed:Chorismate_Synthesis/Erythrose4P_and_Phosphoenolpyruvate_to_Chorismate;seed:Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate);seed:Common_Pathway_For_Synthesis_of_Aromatic_Compounds_(DAHP_synthase_to_chorismate)/Erythrose4P_and_Phosphoenolpyruvate_to_Chorismate</html:p><html:p>XREFS: rhea:21020;rhea:21021;rhea:21022;rhea:21023;bigg:CHORS;bigg:CHRS;bigg:R_CHORS;bigg:R_CHRS;deprecated:MNXR1160;kegg:R01714;metacyc:CHORISMATE-SYNTHASE-RXN;sabiork:1826;seed:rxn01255</html:p><html:p>GENE ASSOCIATION: (bact:AROC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3c292f06-9449-4b48-b500-bc138455e65e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96709"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.5"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21020"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21021"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21022"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21023"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHORS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CHRS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CHORS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CHRS"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01714"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:CHORISMATE-SYNTHASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1826"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_AROC_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1365__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM337__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAB5B164F" metaid="_27c1f31f-2d9b-461e-a386-754adfd45196" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PTRCabcpp</html:p><html:p>REACTION: MNXR103338</html:p><html:p>CLASSIFICATION: 3.6.3.31</html:p><html:p>XREFS: rhea:29995#1;rhea:29996#1;rhea:29997#1;rhea:29998#1;bigg:PTRCabc;bigg:PTRCabcpp;bigg:R_PTRCabc;bigg:R_PTRCabcpp;deprecated:MNXR29076;metacyc:ABC-25-RXN;seed:rxn05163;seed:rxn09213;seed:rxn11263</html:p><html:p>GENE ASSOCIATION: (bact:POTA_ECOLI and bact:POTB_ECOLI and bact:POTC_ECOLI and bact:POTD_ECOLI) or (bact:POTF_ECOLI and bact:POTG_ECOLI and bact:POTH_ECOLI and bact:POTI_ECOLI) or (bact:YDCS_ECOLI and bact:YDCT_ECOLI and bact:YDCU_ECOLI and bact:YDCV_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_27c1f31f-2d9b-461e-a386-754adfd45196"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103338"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29995#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29996#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29997#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29998#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PTRCabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PTRCabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-25-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_POTA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTD_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_POTF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTI_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_YDCS_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YDCT_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YDCU_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YDCV_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM118__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM118__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAB61B2EE" metaid="_37cc31f9-9f8d-4729-85d2-3264d4b25f13" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ASNTRS</html:p><html:p>REACTION: MNXR96064</html:p><html:p>CLASSIFICATION: 6.1.1.22</html:p><html:p>PATHWAYS: kegg:Aminoacyl-tRNA biosynthesis</html:p><html:p>XREFS: bigg:ASNTRS;bigg:ASNTRS_1;bigg:ASNTRSm;bigg:R_ASNTRS;bigg:R_ASNTRS_1;bigg:R_ASNTRSm;deprecated:MNXR53748;deprecated:MNXR81758;deprecated:MNXR91635;kegg:R03648;reactome:R-HSA-379996;reactome:R-HSA-380227;seed:rxn06434;seed:rxn11114</html:p><html:p>GENE ASSOCIATION: (bact:SYN_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: 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rdf:resource="http://identifiers.org/reactome/R-HSA-379996"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-380227"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SYN_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM147__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90665__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89761__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - 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bigg:GALTpts;bigg:GALTptspp;bigg:R_GALTpts;bigg:R_GALTptspp;deprecated:MNXR2532;seed:rxn05567;seed:rxn08586</html:p><html:p>GENE ASSOCIATION: (bact:PT1_ECOLI and bact:PTHP_ECOLI and bact:PTKA_ECOLI and bact:PTKB_ECOLI and bact:PTKC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3bd27588-465d-4ed0-9913-ea70c54afa52"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100018"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALTpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALTptspp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GALTpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GALTptspp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTKA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTKB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTKC_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1233__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1667__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAC4CEA8D" metaid="_9a1e281b-e146-4767-8f5f-aeba88979156" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CYNTt2pp</html:p><html:p>REACTION: MNXR96962</html:p><html:p>XREFS: rhea:29231;rhea:29232;rhea:29233;rhea:29234;bigg:CYNTt2;bigg:CYNTt2pp;bigg:R_CYNTt2;bigg:R_CYNTt2pp;deprecated:MNXR1329;deprecated:MNXR68601;seed:rxn08278;seed:rxn10132</html:p><html:p>GENE ASSOCIATION: (bact:CYNX_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9a1e281b-e146-4767-8f5f-aeba88979156"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96962"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29231"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29232"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29233"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29234"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYNTt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CYNTt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYNTt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CYNTt2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_CYNX_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1191__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1191__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RAC816246" metaid="_2c081fcb-9273-4d18-8448-99383241fe5b" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PGI</html:p><html:p>REACTION: MNXR138699</html:p><html:p>CLASSIFICATION: 5.3.1.9</html:p><html:p>PATHWAYS: kegg:Starch and sucrose metabolism;seed:Glycolysis_and_Gluconeogenesis;seed:Glycolysis_and_Gluconeogenesis/Fructose16BP_to_Pyruvate;seed:Glycolysis_and_Gluconeogenesis/Fructose6P_to_Pyruvate;seed:Glycolysis_and_Gluconeogenesis/Glucose6P_to_Pyruvate;seed:Glycolysis_and_Gluconeogenesis/Glucose_to_Glucose6P;seed:Glycolysis_and_Gluconeogenesis/Glucose_to_Glycerate3P;seed:Glycolysis_and_Gluconeogenesis/Glucose_to_GlyceroneP;seed:Glycolysis_and_Gluconeogenesis/Glucose_to_Phosphoenolpyruvate;seed:Glycolysis_and_Gluconeogenesis/Glucose_to_Pyruvate;seed:Glycolysis_and_Gluconeogenesis/Glyceraldehyde3P_to_Pyruvate;seed:Glycolysis_and_Gluconeogenesis/GlyceroneP_to_Pyruvate;seed:Glycolysis_and_Gluconeogenesis/Phosphoenolpyruvate_to_Glucose6P;seed:Glycolysis_and_Gluconeogenesis/Pyruvate_to_Phosphoenolpyruvate</html:p><html:p>XREFS: bigg:PGI;bigg:R_PGI;deprecated:MNXR106678;deprecated:MNXR130328;deprecated:MNXR83637;kegg:R00771;sabiork:1123;sabiork:8448;seed:rxn00558</html:p><html:p>GENE ASSOCIATION: (bact:G6PI_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2c081fcb-9273-4d18-8448-99383241fe5b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138699"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.9"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PGI"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PGI"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00771"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1123"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/8448"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_G6PI_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM155029__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM160__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAC8EBBB4" metaid="e87d16f8-e05b-4145-bc49-f610d6a0dbd1" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_HISabcpp</html:p><html:p>REACTION: MNXR100644</html:p><html:p>CLASSIFICATION: 3.6.3.21</html:p><html:p>XREFS: rhea:29891#1;rhea:29892#1;rhea:29893#1;rhea:29894#1;bigg:HISabc;bigg:HISabcpp;bigg:R_HISabc;bigg:R_HISabcpp;metacyc:ABC-14-RXN;seed:rxn05164;seed:rxn08718</html:p><html:p>GENE ASSOCIATION: (bact:HISJ_ECOLI and bact:HISM_ECOLI and bact:HISP_ECOLI and bact:HISQ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e87d16f8-e05b-4145-bc49-f610d6a0dbd1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100644"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29891#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29892#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29893#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29894#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HISabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HISabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HISabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-14-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_HISJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HISM_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HISP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HISQ_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM134__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM134__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAC97DA3F" metaid="_5eacdae0-f78e-4e67-8921-e2726d4d2f48" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLUDC</html:p><html:p>REACTION: MNXR95942</html:p><html:p>CLASSIFICATION: 4.1.1.15</html:p><html:p>PATHWAYS: kegg:Alanine, aspartate and glutamate metabolism;kegg:Butanoate metabolism;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;metacyc:GABA shunt;metacyc:L-glutamate degradation IV;metacyc:L-glutamate degradation IX (via 4-aminobutanoate);seed:Gamma-aminobutyrate_(GABA)_shunt;seed:Gamma-aminobutyrate_(GABA)_shunt/Aminobutanal_to_Succinate_semialdehyde;seed:Gamma-aminobutyrate_(GABA)_shunt/Succinate_semialdehyde_to_CrotonoylCoA;seed:Gamma-aminobutyrate_(GABA)_shunt/Succinate_semialdehyde_to_Succinate</html:p><html:p>XREFS: rhea:17785;rhea:17786;rhea:17787;rhea:17788;bigg:ARGDh;bigg:GLUDC;bigg:R_ARGDh;bigg:R_GLUDC;deprecated:MNXR31600;kegg:R00261;metacyc:GLUTDECARBOX-RXN;sabiork:766;seed:rxn00194</html:p><html:p>GENE ASSOCIATION: (bact:DCEA_ECOLI) or (bact:DCEB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5eacdae0-f78e-4e67-8921-e2726d4d2f48"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95942"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.15"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17785"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17786"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17787"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17788"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGDh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUDC"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARGDh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLUDC"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00261"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUTDECARBOX-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/766"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_DCEA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DCEB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM13__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM192__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAC98415C" metaid="_85804f4b-2a84-4b0f-9003-ab83d58a60e4" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_14GLUCANabcpp</html:p><html:p>REACTION: MNXR135685</html:p><html:p>XREFS: deprecated:MNXR53600;deprecated:MNXR80346;seed:rxn07923</html:p><html:p>GENE ASSOCIATION: (bact:MALE_ECOLI and bact:MALF_ECOLI and bact:MALG_ECOLI and bact:MALK_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_85804f4b-2a84-4b0f-9003-ab83d58a60e4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR135685"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_MALE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MALF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MALG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_MALK_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM596__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM596__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAC9B17FD" metaid="e14d7141-02f1-4bcf-89cd-e7fbab45c798" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_G3PCabcpp</html:p><html:p>REACTION: MNXR99873</html:p><html:p>XREFS: bigg:G3PCabcpp;bigg:R_G3PCabcpp;deprecated:MNXR2435</html:p><html:p>GENE ASSOCIATION: (bact:UGPA_ECOLI and bact:UGPB_ECOLI and bact:UGPC_ECOLI and bact:UGPE_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e14d7141-02f1-4bcf-89cd-e7fbab45c798"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99873"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/G3PCabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_G3PCabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_UGPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_UGPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_UGPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_UGPE_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM367__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM367__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RACB5E6D6" metaid="cd1214c4-df9c-4132-bbf5-74b65ebbbe61" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLYATi</html:p><html:p>REACTION: MNXR100313</html:p><html:p>CLASSIFICATION: 2.3.1.29;2.3.1.37</html:p><html:p>PATHWAYS: kegg:Glycine, serine and threonine metabolism;metacyc:L-threonine degradation II;seed:Threonine_degradation;seed:Threonine_degradation/Threonine_to_Glycine_and_Acetaldehyde;seed:Threonine_degradation/Threonine_to_Methylglyoxal</html:p><html:p>XREFS: rhea:20736;rhea:20737;rhea:20738;rhea:20739;bigg:GLYAT;bigg:GLYATi;bigg:GLYATm;bigg:GLYATx;bigg:R_GLYAT;bigg:R_GLYATi;bigg:R_GLYATm;bigg:R_GLYATx;deprecated:MNXR2743;deprecated:MNXR69171;kegg:R00371;metacyc:AKBLIG-RXN;sabiork:838;seed:rxn00274</html:p><html:p>GENE ASSOCIATION: (bact:KBL_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#cd1214c4-df9c-4132-bbf5-74b65ebbbe61"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100313"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.29"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.37"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20736"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20737"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20738"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/20739"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYATi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYATm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYATx"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYATi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYATm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYATx"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00371"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:AKBLIG-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/838"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_KBL_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM114087__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM21__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM29__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAD39A07" metaid="b4b41ca7-e893-44cb-b1e5-35dffda30600" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA2A180pp</html:p><html:p>REACTION: MNXR102994</html:p><html:p>CLASSIFICATION: 3.1.1.4</html:p><html:p>XREFS: bigg:PLIPA2A180pp;bigg:R_PLIPA2A180pp;deprecated:MNXR4332;deprecated:MNXR69748;deprecated:MNXR83924;seed:rxn09149</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b4b41ca7-e893-44cb-b1e5-35dffda30600"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102994"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA2A180pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PLIPA2A180pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM51279__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM236__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM32950__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAD4110AD" metaid="_2778556f-efa4-4fa3-9a55-047c80f5042f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_UDCPDPpp</html:p><html:p>REACTION: MNXR105042</html:p><html:p>XREFS: rhea:17069;rhea:17070;rhea:17071;rhea:17072;bigg:R_UDCPDP;bigg:R_UDCPDPex;bigg:R_UDCPDPpp;bigg:UDCPDP;bigg:UDCPDPex;bigg:UDCPDPpp;deprecated:MNXR26389;deprecated:MNXR55989;deprecated:MNXR70016;sabiork:5225</html:p><html:p>GENE ASSOCIATION: (bact:PGPB_ECOLI) or (bact:UPPP_ECOLI) or (bact:YBJG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2778556f-efa4-4fa3-9a55-047c80f5042f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105042"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17069"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17070"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17071"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17072"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_UDCPDP"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_UDCPDPex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_UDCPDPpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPDP"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPDPex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDCPDPpp"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/5225"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_PGPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_UPPP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YBJG_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5043__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM251__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAD7C75A0" metaid="_02caa729-2840-4e0d-b969-7f0f2e736a6d" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLCTR3</html:p><html:p>REACTION: MNXR100228</html:p><html:p>XREFS: bigg:GLCTR3;bigg:R_GLCTR3;deprecated:MNXR55592;deprecated:MNXR69159;seed:rxn08620</html:p><html:p>GENE ASSOCIATION: (bact:RFAJ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_02caa729-2840-4e0d-b969-7f0f2e736a6d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100228"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCTR3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCTR3"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_RFAJ_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM52__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM55192__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM17__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM55193__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RADCB6AFD" metaid="edd28a61-5b29-4916-b45b-0bff3c959f7c" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_cynt_e</html:p><html:p>REACTION: MNXR98387</html:p><html:p>XREFS: bigg:EX_cynt_e;bigg:R_EX_cynt_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#edd28a61-5b29-4916-b45b-0bff3c959f7c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98387"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cynt_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_cynt_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1191__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RADE9E8C8" metaid="c2c198d4-add5-492c-a7b2-f7b5d9630728" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DHAPT</html:p><html:p>REACTION: MNXR97364</html:p><html:p>CLASSIFICATION: 2.7.1.121</html:p><html:p>PATHWAYS: metacyc:glycerol degradation V;seed:Dihydroxyacetone_kinases;seed:Dihydroxyacetone_kinases/Glycerone_to_GlyceroneP</html:p><html:p>XREFS: rhea:18381;rhea:18382;rhea:18383;rhea:18384;bigg:DHAPT;bigg:R_DHAPT;deprecated:MNXR1539;kegg:R01012;metacyc:2.7.1.121-RXN;seed:rxn00745</html:p><html:p>GENE ASSOCIATION: (bact:DHAK_ECOLI and bact:DHAL_ECOLI and bact:DHAM_ECOLI and bact:PT1_ECOLI and bact:PTHP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c2c198d4-add5-492c-a7b2-f7b5d9630728"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97364"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.121"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/18381"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/18382"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/18383"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/18384"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DHAPT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DHAPT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01012"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:2.7.1.121-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_DHAK_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DHAL_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DHAM_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM460__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM77__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RADFD275D" metaid="_8ba7f783-a323-4736-860b-55940130a48d" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_SO2tpp</html:p><html:p>REACTION: MNXR104456</html:p><html:p>XREFS: bigg:R_SO2tex;bigg:R_SO2tpp;bigg:SO2tex;bigg:SO2tpp;deprecated:MNXR4864;seed:rxn09258;seed:rxn09259</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/biocyc/META:RXN0-5408"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1422"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SUHB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM646__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM127__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RAF28C18E" metaid="e22310ec-2760-4784-a9bd-cf7ec25f6f88" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_DHBD</html:p><html:p>REACTION: MNXR97368</html:p><html:p>CLASSIFICATION: 1.3.1.28</html:p><html:p>PATHWAYS: kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Biosynthesis of siderophore group nonribosomal peptides;metacyc:2,3-dihydroxybenzoate biosynthesis</html:p><html:p>XREFS: rhea:23824;rhea:23825;rhea:23826;rhea:23827;bigg:DHBD;bigg:R_DHBD;deprecated:MNXR1542;deprecated:MNXR70838;kegg:R01505;metacyc:DHBDEHYD-RXN;seed:rxn01094</html:p><html:p>GENE ASSOCIATION: (bact:ENTA_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e22310ec-2760-4784-a9bd-cf7ec25f6f88"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97368"/> - 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species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM455__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAF482FE1" metaid="_115f1a24-7f6e-4edf-bb66-524f0d88f000" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_ins_e</html:p><html:p>REACTION: MNXR98683</html:p><html:p>XREFS: bigg:EX_ins_e;bigg:R_EX_ins_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description 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</rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM435__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM435__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAF60EB8C" metaid="_60f316a8-5252-4b9d-96f5-52896f8d98e3" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_HCYSMT</html:p><html:p>REACTION: MNXR138506</html:p><html:p>CLASSIFICATION: 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rdf:resource="http://identifiers.org/ec-code/2.1.1.10"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21820"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21821"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21822"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/21823"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HCYSMT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HCYSMT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00650"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1035"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MMUM_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference 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<fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNAB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTND_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM533__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM370__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RAF862211" metaid="_91a26491-2591-4308-b401-96655391729c" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_H2St1pp</html:p><html:p>REACTION: MNXR100494</html:p><html:p>XREFS: 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R_LPLIPAL1G180pp</html:p><html:p>REACTION: MNXR101160</html:p><html:p>XREFS: bigg:LPLIPAL1G180pp;bigg:R_LPLIPAL1G180pp;deprecated:MNXR3288</html:p><html:p>GENE ASSOCIATION: (bact:TESA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8ed8239b-6755-4b20-9f55-5438be63c9fb"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL1G180pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL1G180pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_TESA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6607__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM236__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM598__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RB068A67" metaid="_0ef8c466-8b0e-4f5d-a30d-983101060ad7" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GGGABADr</html:p><html:p>REACTION: MNXR100113</html:p><html:p>CLASSIFICATION: 1.2.1.-</html:p><html:p>PATHWAYS: kegg:Arginine and proline metabolism;kegg:Metabolic pathways;seed:Gamma-aminobutyrate_(GABA)_shunt;seed:Gamma-aminobutyrate_(GABA)_shunt/Aminobutanal_to_Succinate_semialdehyde;seed:Gamma-aminobutyrate_(GABA)_shunt/Succinate_semialdehyde_to_CrotonoylCoA;seed:Gamma-aminobutyrate_(GABA)_shunt/Succinate_semialdehyde_to_Succinate</html:p><html:p>XREFS: rhea:28410;rhea:28411;rhea:28412;rhea:28413;bigg:GGGABADr;bigg:R_GGGABADr;deprecated:MNXR2598;kegg:R07418;seed:rxn05127</html:p><html:p>GENE ASSOCIATION: (bact:PUUC_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0ef8c466-8b0e-4f5d-a30d-983101060ad7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100113"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.-"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28410"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28411"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28412"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28413"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GGGABADr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GGGABADr"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07418"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PUUC_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1378__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - 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rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96136"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.14"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS4m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS4m_cho"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS4r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPS4rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPSh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPasel"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPS4m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPS4m_cho"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPS4r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPS4rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPSh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPasel"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATPSYN-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ATP6_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPL_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ATP6_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPL_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ATPZ_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="4"/> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="4"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB0A71B06" metaid="a554977e-d325-4ade-8a06-b0f9b404b3d9" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_SPMDAT1</html:p><html:p>REACTION: MNXR104491</html:p><html:p>CLASSIFICATION: 2.3.1.57</html:p><html:p>PATHWAYS: metacyc:spermine and spermidine degradation I</html:p><html:p>XREFS: rhea:28150;rhea:28151;rhea:28152;rhea:28153;bigg:R_SPMDAT1;bigg:SPMDAT1;deprecated:MNXR4886;metacyc:SPERMACTRAN-RXN;reactome:R-BTA-351208;reactome:R-CEL-351208;reactome:R-CFA-351208;reactome:R-DDI-351208;reactome:R-DME-351208;reactome:R-DRE-351208;reactome:R-GGA-351208;reactome:R-HSA-351208;reactome:R-MMU-351208;reactome:R-RNO-351208;reactome:R-SPO-351208;reactome:R-SSC-351208;reactome:R-TGU-351208;reactome:R-XTR-351208;sabiork:7731;seed:rxn09264</html:p><html:p>GENE ASSOCIATION: (bact:ATDA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a554977e-d325-4ade-8a06-b0f9b404b3d9"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104491"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.57"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28150"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28151"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28152"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28153"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SPMDAT1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SPMDAT1"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SPERMACTRAN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-351208"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-351208"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7731"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ATDA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM124__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM21__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM501__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RB0B57F5B" metaid="ddcecddc-7e1a-4a36-98c8-9c91d20c189f" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_4HOXPACDtex</html:p><html:p>REACTION: MNXR95017</html:p><html:p>XREFS: bigg:4HOXPACDtex;bigg:R_4HOXPACDtex;deprecated:MNXR237;seed:rxn08006</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ddcecddc-7e1a-4a36-98c8-9c91d20c189f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95017"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/4HOXPACDtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_4HOXPACDtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM479__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM479__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB0CC4454" metaid="a2ce5659-044b-47e0-a73f-39aff8aad5b6" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_S7PI</html:p><html:p>REACTION: MNXR104235</html:p><html:p>CLASSIFICATION: 5.3.1.28</html:p><html:p>PATHWAYS: metacyc:ADP-L-glycero-beta-D-manno-heptose 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rdf:resource="http://identifiers.org/bigg.reaction/S7PI"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09768"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN0-4301"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GMHA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM271__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM17114__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB0E75CCD" metaid="_85f796ac-c02b-4286-9358-516b788e4659" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_glyald_e</html:p><html:p>REACTION: 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fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB1AFD75" metaid="_6043aa7c-1b97-4b52-88ed-7d22647f48ad" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_sulfac_e</html:p><html:p>REACTION: MNXR98950</html:p><html:p>XREFS: bigg:EX_sula_e;bigg:EX_sulfac_e;bigg:R_EX_sula_e;bigg:R_EX_sulfac_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6043aa7c-1b97-4b52-88ed-7d22647f48ad"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98950"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_sula_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_sulfac_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_sula_e"/> - 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R_AMPtex</html:p><html:p>REACTION: MNXR95830</html:p><html:p>XREFS: bigg:AMPt;bigg:AMPtex;bigg:AMPth;bigg:AMPtn;bigg:AMPtn_1;bigg:AMPtp;bigg:AMPtr;bigg:R_AMPt;bigg:R_AMPtex;bigg:R_AMPth;bigg:R_AMPtn;bigg:R_AMPtn_1;bigg:R_AMPtp;bigg:R_AMPtr;deprecated:MNXR720;seed:rxn08134;seed:rxn13227</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#fb03e033-982d-44fb-a5bf-073486a1fabe"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95830"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPth"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPtn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPtn_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPtp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AMPtr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPth"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPtn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPtn_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPtp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AMPtr"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation 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</reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RB2A5F44B" metaid="_9d651997-b180-4e42-921d-408b522b7bbd" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GTHRDtex</html:p><html:p>REACTION: MNXR100449</html:p><html:p>XREFS: bigg:GTHRDt2;bigg:GTHRDtex;bigg:GTHRDtr;bigg:GTHRDtu;bigg:R_GTHRDt2;bigg:R_GTHRDtex;bigg:R_GTHRDtr;bigg:R_GTHRDtu;bigg:R_r1493;bigg:r1493;deprecated:MNXR2831;deprecated:MNXR91587;reactome:R-HSA-1247915;reactome:R-HSA-1500817;seed:rxn08677;seed:rxn10829</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9d651997-b180-4e42-921d-408b522b7bbd"> - 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<rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AKGt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AKGt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-23"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_KGTP_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM20__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM20__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB5C676C7" metaid="_2989665e-1346-44e7-85a3-0fb2ce5363f4" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3HAD120</html:p><html:p>REACTION: MNXR94877</html:p><html:p>CLASSIFICATION: 2.3.1.-;2.3.1.85;2.3.1.86;4.2.1.58;4.2.1.59;4.2.1.60;4.2.1.61</html:p><html:p>PATHWAYS: kegg:Fatty acid biosynthesis;kegg:Fatty acid metabolism;kegg:Metabolic pathways;seed:Fatty_Acid_Biosynthesis_FASII;seed:Fatty_Acid_Biosynthesis_FASII/AcetylCoA_to_MalonylCoA</html:p><html:p>XREFS: bigg:3HAD120;bigg:3HAD120_1;bigg:R_3HAD120;bigg:R_3HAD120_1;deprecated:MNXR142;kegg:R04965;seed:rxn05331</html:p><html:p>GENE ASSOCIATION: (bact:FABA_ECOLI) or (bact:FABZ_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_2989665e-1346-44e7-85a3-0fb2ce5363f4"> - 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</bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_DPPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPF_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM683__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM683__64__MNXC3" stoichiometry="1"/> - <speciesReference 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<rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_3cmp_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2182__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB5E8DBD" metaid="d5981bb0-cd30-4d38-bb37-c881490d208b" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ALDD19xr</html:p><html:p>REACTION: MNXR95743</html:p><html:p>CLASSIFICATION: 1.2.1.39;1.2.1.5</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;kegg:Phenylalanine metabolism;kegg:Styrene degradation;metacyc:L-phenylalanine degradation II (anaerobic);metacyc:L-phenylalanine degradation IV (mammalian, via side chain);metacyc:phenylethylamine degradation I;metacyc:phenylethylamine degradation II;metacyc:styrene 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<rdf:li rdf:resource="http://identifiers.org/rhea/21395"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALDD19xr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALDD19xr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_r0546"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r0546"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02536"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PHENDEHYD-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/2456"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FEAB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM473__64__MNXC3" 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xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LGOD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM636__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1423__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB6126535" metaid="_7b963489-840b-40d3-b003-303f0c85582f" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PGPP161pp</html:p><html:p>REACTION: MNXR102565</html:p><html:p>CLASSIFICATION: 3.1.3.27</html:p><html:p>XREFS: 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</bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_PGPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PGPB_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM75103__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM75101__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RB62274B5" metaid="_0e31d711-f0ab-4b45-9652-58074b840f84" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_OHPBAT</html:p><html:p>REACTION: MNXR102169</html:p><html:p>CLASSIFICATION: 2.6.1.52</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Vitamin B6 metabolism;metacyc:pyridoxal 5'-phosphate biosynthesis I;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Erythrose4P_and_Deoxyxylulose5P_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Glyceraldehyde3P_and_Pyruvate_to_Deoxyxylulose5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Pyridoxal_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Pyridoxamine_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Pyridoxine_to_Pyridoxal5P;seed:Pyridoxin_(Vitamin_B6)_Biosynthesis/Ribulose5P_and_Glyceraldehyde3P_to_Pyridoxal5P</html:p><html:p>XREFS: rhea:16573;rhea:16574;rhea:16575;rhea:16576;bigg:OHPBAT;bigg:R_OHPBAT;deprecated:MNXR32039;kegg:R05085;metacyc:PSERTRANSAMPYR-RXN;seed:rxn03445</html:p><html:p>GENE ASSOCIATION: (bact:SERC_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0e31d711-f0ab-4b45-9652-58074b840f84"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102169"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.52"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16573"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16574"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16575"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/16576"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OHPBAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_OHPBAT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05085"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PSERTRANSAMPYR-RXN"/> - </rdf:Bag> - 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bigg:GLCRt2r;bigg:GLCRt2rpp;bigg:R_GLCRt2r;bigg:R_GLCRt2rpp;deprecated:MNXR2676;seed:rxn05572;seed:rxn08613</html:p><html:p>GENE ASSOCIATION: (bact:GARP_ECOLI) or (bact:GUDP_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c717707a-3042-450c-9202-84104e7a2f54"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100221"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCRt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCRt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCRt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCRt2rpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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rhea:51816;rhea:51817;rhea:51818;rhea:51819</html:p><html:p>GENE ASSOCIATION: (bact:FADK_ECOLI) or (bact:LCFA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d808f67f-71d4-445d-a37d-3441e05904a6"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR129291"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/51816"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/51817"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/51818"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/51819"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef 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metaid="_9193702c-9b9f-461a-9608-09b57b302220" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_OMMBLHX3</html:p><html:p>REACTION: MNXR138670</html:p><html:p>XREFS: bigg:OMMBLHX3;bigg:R_OMMBLHX3;deprecated:MNXR102188;deprecated:MNXR3965;deprecated:MNXR69587;seed:rxn09041</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9193702c-9b9f-461a-9608-09b57b302220"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138670"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OMMBLHX3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_OMMBLHX3"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference 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<notes> - <html:p>SOURCE: R_PROGLYabcpp</html:p><html:p>REACTION: MNXR103190</html:p><html:p>XREFS: bigg:PROGLYabcpp;bigg:R_PROGLYabcpp;deprecated:MNXR55858;deprecated:MNXR69791;seed:rxn09189</html:p><html:p>GENE ASSOCIATION: (bact:DPPA_ECOLI and bact:DPPB_ECOLI and bact:DPPC_ECOLI and bact:DPPD_ECOLI and bact:DPPF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_26fef28b-9b38-4209-b353-9a8d98a19ff0"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103190"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PROGLYabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PROGLYabcpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_DPPA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_DPPF_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7481__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7481__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB66596C9" metaid="_3385dd97-4e89-4dfb-a3a9-fa1d77bc9a0a" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PGPP161</html:p><html:p>REACTION: MNXR102565</html:p><html:p>CLASSIFICATION: 3.1.3.27</html:p><html:p>XREFS: bigg:PGPP161;bigg:PGPP161pp;bigg:R_PGPP161;bigg:R_PGPP161pp;deprecated:MNXR4209;deprecated:MNXR69685;seed:rxn09105</html:p><html:p>GENE ASSOCIATION: (bact:PGPA_ECOLI) or (bact:PGPB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3385dd97-4e89-4dfb-a3a9-fa1d77bc9a0a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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MNXR101436</html:p><html:p>XREFS: bigg:MDDEP3pp;bigg:R_MDDEP3pp;deprecated:MNXR3461;deprecated:MNXR69425;deprecated:MNXR83293;seed:rxn08897</html:p><html:p>GENE ASSOCIATION: (bact:DACB_ECOLI) or (bact:MEPA_ECOLI) or (bact:PBP7_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e38fc8f0-a916-4e68-8507-7ff9693a2d6e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101436"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MDDEP3pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MDDEP3pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - 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species="MNXM173__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1451__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB8D80305" metaid="_923bb8b4-200d-45ac-ba8a-d25f10d403a4" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GLCDpp</html:p><html:p>REACTION: MNXR100177</html:p><html:p>XREFS: bigg:GLCDe;bigg:GLCDpp;bigg:R_GLCDe;bigg:R_GLCDpp;deprecated:MNXR55580;deprecated:MNXR94190;seed:rxn08608;seed:rxn10116</html:p><html:p>GENE ASSOCIATION: (bact:DHG_ECOLI) or (bact:YLII_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: 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rdf:resource="http://identifiers.org/bigg.reaction/EX_ocdca_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_ocdca_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM236__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RB9161B64" metaid="_00420f8e-c939-4854-a9e5-664090037404" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_UDPGPpp</html:p><html:p>REACTION: MNXR105070</html:p><html:p>CLASSIFICATION: 3.6.1.45;3.6.1.8;3.6.1.9</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Pyrimidine metabolism;kegg:Starch and sucrose metabolism</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/reactome/R-GGA-6810464"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-6810464"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-6810464"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-6810464"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-6810464"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-6810464"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/446"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_USHA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM52__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - 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- <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1562__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1562__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RBD50C63" metaid="c0051ec8-1cdf-475b-b128-4bbae1c4317e" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PROtex</html:p><html:p>REACTION: MNXR103213</html:p><html:p>XREFS: bigg:PROtex;bigg:PROtm;bigg:R_PROtex;bigg:R_PROtm;deprecated:MNXR4457;deprecated:MNXR80681;sabiork:12183;sabiork:13974;seed:rxn09193;seed:rxn09720;seed:rxn10945;seed:rxn11339</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or 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rdf:resource="http://identifiers.org/bigg.reaction/R_G3PT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00841"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14965"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1182"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/12405"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SUPH_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM66__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM89612__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC23D3212" metaid="aa587651-2372-4d39-9a80-fc9ed3c3708c" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_TKT1</html:p><html:p>REACTION: MNXR104868</html:p><html:p>CLASSIFICATION: 2.2.1.1</html:p><html:p>XREFS: bigg:R_TKT1;bigg:R_TKT1h;bigg:TKT1;bigg:TKT1h;deprecated:MNXR55952;deprecated:MNXR69977</html:p><html:p>GENE ASSOCIATION: (bact:TKT1_ECOLI) or (bact:TKT2_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#aa587651-2372-4d39-9a80-fc9ed3c3708c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104868"/> - <rdf:li 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id="RC2D8CC50" metaid="e2297f80-2ef1-49be-911c-1ce0d12e2061" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NDPK1</html:p><html:p>REACTION: MNXR96119</html:p><html:p>CLASSIFICATION: 2.7.4.6</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Purine metabolism;metacyc:guanosine ribonucleotides de novo biosynthesis;metacyc:ppGpp biosynthesis;seed:Purine_conversions;seed:Purine_conversions/AMP_to_ADP;seed:Purine_conversions/AMP_to_Hypoxanthine;seed:Purine_conversions/Adenine_to_AMP;seed:Purine_conversions/GDP_to_GTP;seed:Purine_conversions/GMP_to_GDP;seed:Purine_conversions/GMP_to_Guanine;seed:Purine_conversions/dADP_to_dAMP;seed:Purine_conversions/dGDP_to_dGMP</html:p><html:p>XREFS: rhea:27686;rhea:27687;rhea:27688;rhea:27689;bigg:ATGDm;bigg:NDPK1;bigg:NDPK1m;bigg:NDPK1n;bigg:R_ATGDm;bigg:R_NDPK1;bigg:R_NDPK1m;bigg:R_NDPK1n;deprecated:MNXR55757;deprecated:MNXR69528;kegg:R00330;metacyc:GDPKIN-RXN;sabiork:138;seed:rxn00237</html:p><html:p>GENE ASSOCIATION: 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sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLCS1</html:p><html:p>REACTION: MNXR100223</html:p><html:p>CLASSIFICATION: 2.4.1.21</html:p><html:p>XREFS: bigg:GLCS1;bigg:R_GLCS1;deprecated:MNXR50942;deprecated:MNXR53949;deprecated:MNXR69155;seed:rxn13643</html:p><html:p>GENE ASSOCIATION: (bact:GLGA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_664dc06c-4cfe-42fd-af0e-ca93d5b428ae"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100223"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.21"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCS1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCS1"/> - </rdf:Bag> - </bqbiol:is> - 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rdf:resource="http://identifiers.org/kegg.reaction/R01072"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:PRPPAMIDOTRANS-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-419152"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SCE-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SPO-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-73815"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-73815"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/114"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PUR1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM37__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM91__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90003__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC64BB9D" metaid="_5cb64d59-3132-41c2-9970-6acbfabee99d" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GLUABUTt7pp</html:p><html:p>REACTION: MNXR100276</html:p><html:p>XREFS: rhea:28919;rhea:28920;rhea:28921;rhea:28922;bigg:GLU4ABUTthi;bigg:GLU4ABUTtmi;bigg:GLUABUTt7;bigg:GLUABUTt7pp;bigg:R_GLU4ABUTthi;bigg:R_GLU4ABUTtmi;bigg:R_GLUABUTt7;bigg:R_GLUABUTt7pp;deprecated:MNXR31598;metacyc:TRANS-RXN-261;seed:rxn08628;seed:rxn10136</html:p><html:p>GENE ASSOCIATION: (bact:GADC_ECOLI)</html:p><html:p>PROP 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rdf:resource="http://identifiers.org/bigg.reaction/R_GLU4ABUTthi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLU4ABUTtmi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLUABUTt7"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLUABUTt7pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-261"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GADC_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM192__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM192__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC67CD9ED" metaid="_31b3fcb1-1132-4848-b055-476d584e3551" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FRUURtex</html:p><html:p>REACTION: MNXR99659</html:p><html:p>XREFS: bigg:FRUURtex;bigg:R_FRUURtex;deprecated:MNXR2308;seed:rxn08539</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_31b3fcb1-1132-4848-b055-476d584e3551"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99659"/> - <rdf:li 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reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA1G181pp</html:p><html:p>REACTION: MNXR102987</html:p><html:p>XREFS: bigg:PLIPA1G181pp;bigg:R_PLIPA1G181pp;deprecated:MNXR4325</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_474b2f32-f6c1-43f1-95df-6a2890b60c16"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102987"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PLIPA1G181pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PLIPA1G181pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1773__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM306__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3455__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RC6B6588D" metaid="_5e0c6001-a1a9-4241-a128-c0228a5e0264" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_SPMDabcpp</html:p><html:p>REACTION: MNXR104494</html:p><html:p>CLASSIFICATION: 3.6.3.31</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/rhea/30000#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30001#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30002#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SPMDabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SPMDabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SPMDabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SPMDabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-24-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_POTA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_POTD_ECOLI"/> - </fbc:and> - <fbc:and> - 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fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RC6D62FD4" metaid="_20a20e74-957b-426d-8b6d-9ae6f1076709" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_MALTTRtexi</html:p><html:p>REACTION: MNXR138571</html:p><html:p>XREFS: bigg:MALTTRtexi;bigg:R_MALTTRtexi;deprecated:MNXR55690;sabiork:11212</html:p><html:p>GENE ASSOCIATION: (bact:LAMB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_20a20e74-957b-426d-8b6d-9ae6f1076709"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138571"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MALTTRtexi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MALTTRtexi"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/11212"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LAMB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM61038__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM61038__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RC6FE6116" metaid="d498d2f9-845d-4018-9d6b-d80c54d40f0d" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ILEabcpp</html:p><html:p>REACTION: MNXR100821</html:p><html:p>XREFS: rhea:29819#1;rhea:29820#1;rhea:29821#1;rhea:29822#1;bigg:ILEabc;bigg:ILEabcpp;bigg:R_ILEabc;bigg:R_ILEabcpp;metacyc:ABC-15-RXN;seed:rxn05179;seed:rxn08745</html:p><html:p>GENE ASSOCIATION: (bact:LIVF_ECOLI and bact:LIVG_ECOLI and bact:LIVH_ECOLI and bact:LIVJ_ECOLI and bact:LIVM_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d498d2f9-845d-4018-9d6b-d80c54d40f0d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100821"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29819#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29820#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29821#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29822#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ILEabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ILEabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ILEabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-15-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_LIVF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVM_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM231__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM231__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC709D0C" metaid="a9b49c68-38f1-4b56-9f64-f0563c97ca40" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_12PPDStex</html:p><html:p>REACTION: MNXR94684</html:p><html:p>XREFS: bigg:12PPDStex;bigg:12PPDStpp;bigg:12PPDt;bigg:R_12PPDStex;bigg:R_12PPDStpp;bigg:R_12PPDt;deprecated:MNXR15</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a9b49c68-38f1-4b56-9f64-f0563c97ca40"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94684"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/12PPDStex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/12PPDStpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/12PPDt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_12PPDStex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_12PPDStpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_12PPDt"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1255__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1255__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC70D7A8B" metaid="e99ef224-2519-4fb4-9b2c-62ad3cd6d51a" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PTRCtex</html:p><html:p>REACTION: MNXR103339</html:p><html:p>XREFS: bigg:PTRCt;bigg:PTRCtex;bigg:PTRCtex2;bigg:R_PTRCt;bigg:R_PTRCtex;bigg:R_PTRCtex2;bigg:R_r0907;bigg:r0907;deprecated:MNXR4521;seed:rxn09216;seed:rxn13393</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e99ef224-2519-4fb4-9b2c-62ad3cd6d51a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103339"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PTRCtex2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PTRCt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PTRCtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PTRCtex2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_r0907"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/r0907"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM118__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM118__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC718BD41" metaid="_1e79d89f-5402-47ae-9ee1-9b7119331e85" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_XMPtex</html:p><html:p>REACTION: MNXR105231</html:p><html:p>XREFS: seed:rxn09380</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1e79d89f-5402-47ae-9ee1-9b7119331e85"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105231"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM298__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM298__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC71DE0B5" metaid="_576f16a0-03ab-4add-a0b2-c1f8c04369a4" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ALLTNt2rpp</html:p><html:p>REACTION: MNXR95770</html:p><html:p>XREFS: bigg:ALLTNt2r;bigg:ALLTNt2rpp;bigg:R_ALLTNt2r;bigg:R_ALLTNt2rpp;deprecated:MNXR55025;deprecated:MNXR68339;deprecated:MNXR81660;seed:rxn05682;seed:rxn08116</html:p><html:p>GENE ASSOCIATION: (bact:ALLP_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_576f16a0-03ab-4add-a0b2-c1f8c04369a4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95770"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALLTNt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALLTNt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALLTNt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALLTNt2rpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ALLP_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM612__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM612__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RC73C6D95" metaid="_39ccf609-effa-4933-883f-42774f361002" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_12DGR161tipp</html:p><html:p>REACTION: MNXR94679</html:p><html:p>XREFS: bigg:12DGR161tipp;bigg:R_12DGR161tipp;deprecated:MNXR11</html:p><html:p>PROP BC-p: 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metaid="d68abbd0-705e-4e35-9f68-f448052a59c1" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ARBTNexs</html:p><html:p>REACTION: MNXR95928</html:p><html:p>XREFS: bigg:ARBTNexs;bigg:R_ARBTNexs;deprecated:MNXR53604;seed:rxn08144</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d68abbd0-705e-4e35-9f68-f448052a59c1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95928"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBTNexs"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARBTNexs"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SPONTANEOUS"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM196__64__MNXC2" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM96506__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC2" stoichiometry="3"/> - <speciesReference constant="true" species="MNXM1464__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RC7648C13" metaid="_1ee0d5da-772d-4863-a418-d739d8a31ada" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NO2t2rpp</html:p><html:p>REACTION: MNXR101984</html:p><html:p>XREFS: bigg:NO2t2r;bigg:NO2t2rpp;bigg:R_NO2t2r;bigg:R_NO2t2rpp;deprecated:MNXR3841;seed:rxn05625;seed:rxn08998</html:p><html:p>GENE ASSOCIATION: (bact:NARK_ECOLI) or (bact:NIRC_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1ee0d5da-772d-4863-a418-d739d8a31ada"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101984"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO2t2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NO2t2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NO2t2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NO2t2rpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_NARK_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NIRC_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM107__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM107__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RC7725EFF" metaid="_847e01ed-e27b-413f-9e43-f13121a12ccc" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_XYLUt2pp</html:p><html:p>REACTION: MNXR138930</html:p><html:p>XREFS: bigg:R_XYLUt2pp;bigg:XYLUt2pp;deprecated:MNXR105266;deprecated:MNXR32601;deprecated:MNXR70078;seed:rxn09386</html:p><html:p>GENE ASSOCIATION: (bact:YIAM_ECOLI and bact:YIAN_ECOLI and bact:YIAO_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_847e01ed-e27b-413f-9e43-f13121a12ccc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138930"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_XYLUt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/XYLUt2pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef 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id="RC9AC02E2" metaid="bdafa22f-3e25-47d1-a0d1-1bc9e97ca82d" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CGLYtex</html:p><html:p>REACTION: MNXR96658</html:p><html:p>XREFS: bigg:CGLYtex;bigg:R_CGLYtex;deprecated:MNXR1132;seed:rxn08211</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bdafa22f-3e25-47d1-a0d1-1bc9e97ca82d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96658"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CGLYtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CGLYtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> 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R_CBL1abcpp</html:p><html:p>REACTION: MNXR96471</html:p><html:p>CLASSIFICATION: 3.6.3.33</html:p><html:p>XREFS: bigg:CBL1abc;bigg:CBL1abcpp;bigg:R_CBL1abc;bigg:R_CBL1abcpp;deprecated:MNXR55135;deprecated:MNXR81871;metacyc:ABC-5-RXN</html:p><html:p>GENE ASSOCIATION: (bact:BTUC_ECOLI and bact:BTUD_ECOLI and bact:BTUF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8950143f-5b80-49c3-8194-624bce8ea361"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96471"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.33"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBL1abc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CBL1abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CBL1abc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CBL1abcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-5-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_BTUC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_BTUD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_BTUF_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM91519__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM91519__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RCA3AEEE9" metaid="_6faec676-6337-4c12-91cc-9c9b5ae86cb8" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ADNK1</html:p><html:p>REACTION: MNXR95456</html:p><html:p>CLASSIFICATION: 2.7.1.20;2.7.1.74</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Purine metabolism;metacyc:adenine and adenosine salvage 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rdf:resource="http://identifiers.org/kegg.reaction/R00185"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ADENOSINE-KINASE-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/252"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_KAD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM212__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RCA4896B4" metaid="f2646f85-6be7-40f8-bfcc-bfad1e341bba" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GALCTNLtex</html:p><html:p>REACTION: MNXR99959</html:p><html:p>XREFS: bigg:GALCTNLtex;bigg:R_GALCTNLtex;deprecated:MNXR31502;deprecated:MNXR69093;seed:rxn08577</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#f2646f85-6be7-40f8-bfcc-bfad1e341bba"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99959"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTNLtex"/> - <rdf:li 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R_ATPHs</html:p><html:p>REACTION: MNXR96130</html:p><html:p>CLASSIFICATION: 3.5.4.17;3.5.4.18</html:p><html:p>XREFS: rhea:13037;rhea:13038;rhea:13039;rhea:13040;bigg:ATPHs;bigg:R_ATPHs;deprecated:MNXR81781;deprecated:MNXR891;kegg:R00088;metacyc:ATP-DEAMINASE-RXN;seed:rxn00064</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c8ec62d0-a1ad-4372-9aad-2f288c11c0ad"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96130"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.17"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13037"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13038"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13039"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13040"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ATPHs"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ATPHs"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00088"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ATP-DEAMINASE-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SPONTANEOUS"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - 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reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_so2_e</html:p><html:p>REACTION: MNXR98934</html:p><html:p>XREFS: bigg:EX_so2_e;bigg:R_EX_so2_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_817fe67f-3631-40a5-8327-b84d20b45b52"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98934"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_so2_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_so2_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM4835__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" 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rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-272"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM750__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM750__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD06FA00B" metaid="_0fc6786c-d490-4a53-9e2c-ace304bbdc86" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_DADNt2pp</html:p><html:p>REACTION: MNXR97080</html:p><html:p>XREFS: rhea:29979;rhea:29980;rhea:29981;rhea:29982;bigg:DADNt2;bigg:DADNt2pp;bigg:R_DADNt2;bigg:R_DADNt2pp;deprecated:MNXR1406;metacyc:TRANS-RXN-108C;seed:rxn05317;seed:rxn08292</html:p><html:p>GENE ASSOCIATION: (bact:NUPC_ECOLI) or (bact:NUPG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0fc6786c-d490-4a53-9e2c-ace304bbdc86"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97080"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29979"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29980"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29981"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29982"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DADNt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DADNt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DADNt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_DADNt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108C"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_NUPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUPG_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM625__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM625__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD08DE768" metaid="_7bf1cdb0-628f-4d39-9a47-fe74e817930c" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ACMANAptspp</html:p><html:p>REACTION: MNXR95275</html:p><html:p>XREFS: bigg:ACMANApts;bigg:ACMANAptspp;bigg:R_ACMANApts;bigg:R_ACMANAptspp;deprecated:MNXR54953;deprecated:MNXR68262;deprecated:MNXR81472;seed:rxn08046;seed:rxn10183</html:p><html:p>GENE ASSOCIATION: (bact:PT1_ECOLI and bact:PTHP_ECOLI and bact:PTNAB_ECOLI and bact:PTNC_ECOLI and bact:PTND_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_7bf1cdb0-628f-4d39-9a47-fe74e817930c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95275"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACMANApts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACMANAptspp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACMANApts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACMANAptspp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNAB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTND_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2403__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4708__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RD0AD1851" metaid="_4798c115-f9cc-42cf-84f9-4c197b518c6d" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PEAMNtex</html:p><html:p>REACTION: MNXR102462</html:p><html:p>XREFS: rhea:29743;rhea:29744;rhea:29745;rhea:29746;bigg:PEAMNtex;bigg:R_PEAMNtex;deprecated:MNXR4150;seed:rxn09080;seed:rxn11405</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_4798c115-f9cc-42cf-84f9-4c197b518c6d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102462"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29743"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29744"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29745"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29746"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PEAMNtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PEAMNtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM660__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM660__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD0CC317B" metaid="_070e0169-addc-475d-a5ed-3b47fcb11ba4" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RHCCE</html:p><html:p>REACTION: MNXR138792</html:p><html:p>CLASSIFICATION: 4.4.1.21</html:p><html:p>PATHWAYS: kegg:Biosynthesis of amino acids;kegg:Cysteine and methionine metabolism;kegg:Metabolic pathways</html:p><html:p>XREFS: rhea:17753;rhea:17754;rhea:17755;rhea:17756;bigg:RHCCE;bigg:R_RHCCE;deprecated:MNXR4623;deprecated:MNXR69859;kegg:R01291</html:p><html:p>GENE ASSOCIATION: (bact:LUXS_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_070e0169-addc-475d-a5ed-3b47fcb11ba4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138792"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.21"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17753"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17754"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17755"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/17756"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RHCCE"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RHCCE"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01291"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LUXS_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1777__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM114070__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2449__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RD0DAD322" metaid="_96507b44-2d49-407d-95bd-0e75387f5c9b" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PROGLYtex</html:p><html:p>REACTION: MNXR103191</html:p><html:p>XREFS: bigg:PROGLYtex;bigg:R_PROGLYtex;deprecated:MNXR55859;deprecated:MNXR69792;seed:rxn09190</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_96507b44-2d49-407d-95bd-0e75387f5c9b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR103191"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/PROGLYtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_PROGLYtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM7481__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM7481__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RD12E24DD" metaid="a23d7ca2-ad93-4ecf-b227-f5f00fbafae5" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_H2tex</html:p><html:p>REACTION: MNXR100495</html:p><html:p>XREFS: bigg:H2td;bigg:H2tex;bigg:H2th;bigg:H2tm;bigg:H2tpp;bigg:R_H2td;bigg:R_H2tex;bigg:R_H2th;bigg:R_H2tm;bigg:R_H2tpp;deprecated:MNXR55614;deprecated:MNXR69200;seed:rxn08691;seed:rxn08692;seed:rxn10542</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a23d7ca2-ad93-4ecf-b227-f5f00fbafae5"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100495"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2td"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2th"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/H2tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2td"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2th"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_H2tpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM195__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM195__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RD15E5947" metaid="bd47e11b-c2d5-43ed-bce9-e9d7753bdfdc" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_O2tpp</html:p><html:p>REACTION: MNXR102090</html:p><html:p>XREFS: bigg:O2t;bigg:O2ter;bigg:O2tex;bigg:O2thr;bigg:O2tm;bigg:O2tn;bigg:O2tp;bigg:O2tpp;bigg:O2trhu;bigg:O2tu;bigg:R_O2t;bigg:R_O2ter;bigg:R_O2tex;bigg:R_O2thr;bigg:R_O2tm;bigg:R_O2tn;bigg:R_O2tp;bigg:R_O2tpp;bigg:R_O2trhu;bigg:R_O2tu;deprecated:MNXR3931;deprecated:MNXR66722;metacyc:TRANS-RXN0-474;seed:rxn05468;seed:rxn09031;seed:rxn09032;seed:rxn09641;seed:rxn09734</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bd47e11b-c2d5-43ed-bce9-e9d7753bdfdc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102090"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2ter"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2thr"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/O2trhu"/> - <rdf:li 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species="MNXM390__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM390__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD279E18A" metaid="a3fceda5-cab5-4c2d-b400-51847d25efb3" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RNDR3b</html:p><html:p>REACTION: MNXR104065</html:p><html:p>XREFS: bigg:RNDR3b;bigg:R_RNDR3b;deprecated:MNXR55891;deprecated:MNXR69865;deprecated:MNXR84123;seed:rxn09233</html:p><html:p>GENE ASSOCIATION: (bact:GLRX1_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI) or (bact:GLRX2_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI) or (bact:GLRX3_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI) or (bact:GLRX4_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - 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fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLRX3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLRX4_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM220__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90719__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM411__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90831__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD2BFB6BF" metaid="_6898cd41-5639-402e-bd48-b3877773c7ba" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MECDPDH2</html:p><html:p>REACTION: MNXR101448</html:p><html:p>XREFS: bigg:MECDPDH2;bigg:R_MECDPDH2;deprecated:MNXR55700;seed:rxn05293</html:p><html:p>GENE ASSOCIATION: (bact:ISPG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6898cd41-5639-402e-bd48-b3877773c7ba"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101448"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/MECDPDH2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_MECDPDH2"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ISPG_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1168__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM606__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD2CAA122" metaid="_1cc82fc5-11c6-48b0-a5a9-a5529b73dc74" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_2AGPGAT180</html:p><html:p>REACTION: MNXR94776</html:p><html:p>XREFS: bigg:2AGPGAT180;bigg:R_2AGPGAT180;deprecated:MNXR81</html:p><html:p>GENE ASSOCIATION: (bact:AAS_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1cc82fc5-11c6-48b0-a5a9-a5529b73dc74"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94776"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/2AGPGAT180"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_2AGPGAT180"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_AAS_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM150642__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM236__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM75102__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD2CF2CE0" metaid="fba327ea-955c-4505-994d-1254df685e8b" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2ATE120</html:p><html:p>REACTION: MNXR101169</html:p><html:p>XREFS: bigg:LPLIPAL2ATE120;bigg:R_LPLIPAL2ATE120;deprecated:MNXR3297</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#fba327ea-955c-4505-994d-1254df685e8b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101169"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL2ATE120"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL2ATE120"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - 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<listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5266__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1771__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD35D0E52" metaid="_3c2a614b-93ef-40b7-b19d-c01bc9763e7d" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GALUi</html:p><html:p>REACTION: MNXR100022</html:p><html:p>CLASSIFICATION: 2.7.7.23;2.7.7.33;2.7.7.64;2.7.7.9</html:p><html:p>PATHWAYS: kegg:Amino sugar and nucleotide sugar metabolism;kegg:Biosynthesis of antibiotics;kegg:Galactose metabolism;kegg:Metabolic pathways;kegg:Pentose and glucuronate interconversions;kegg:Starch and sucrose 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rdf:resource="http://identifiers.org/ec-code/2.7.7.23"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.33"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.64"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.9"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALUi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GALUi"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00289"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-70286"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-70286"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-70286"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-70286"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-70286"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-70286"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-70286"/> - <rdf:li 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constant="true" species="MNXM168__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM722742__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD66E0CC6" metaid="d428e328-9478-44d1-94c4-83a1970609ba" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NADH18pp</html:p><html:p>REACTION: MNXR101866</html:p><html:p>CLASSIFICATION: 1.6.5.3</html:p><html:p>XREFS: bigg:NADH18pp;bigg:R_NADH18pp;deprecated:MNXR135897;deprecated:MNXR50991;deprecated:MNXR69512;seed:rxn08974</html:p><html:p>GENE ASSOCIATION: (bact:NUOA_ECOLI and bact:NUOB_ECOLI and bact:NUOCD_ECOLI and bact:NUOE_ECOLI and bact:NUOF_ECOLI and bact:NUOG_ECOLI and bact:NUOH_ECOLI and bact:NUOI_ECOLI and bact:NUOJ_ECOLI and bact:NUOK_ECOLI and bact:NUOL_ECOLI and bact:NUOM_ECOLI and bact:NUON_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d428e328-9478-44d1-94c4-83a1970609ba"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101866"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.6.5.3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NADH18pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NADH18pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_NUOA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOCD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOE_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOI_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOK_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOL_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUOM_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUON_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="4"/> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2178__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="4"/> - <speciesReference constant="true" species="MNXM558__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD6795C13" metaid="_5a9f9f7a-fafb-4f82-89e5-7b13d2a56aa5" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_SARCOX</html:p><html:p>REACTION: MNXR104272</html:p><html:p>CLASSIFICATION: 1.5.3.1</html:p><html:p>PATHWAYS: kegg:Glycine, serine and threonine metabolism;kegg:Metabolic pathways;metacyc:creatinine degradation I;metacyc:creatinine degradation II;metacyc:glycine betaine degradation I</html:p><html:p>XREFS: rhea:13313;rhea:13314;rhea:13315;rhea:13316;bigg:R_SARCOX;bigg:R_SARCOXp;bigg:SARCOX;bigg:SARCOXp;deprecated:MNXR4772;deprecated:MNXR55902;deprecated:MNXR65823;kegg:R00610;metacyc:SARCOX-RXN;sabiork:1001;seed:rxn00433</html:p><html:p>GENE ASSOCIATION: 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rdf:resource="http://identifiers.org/bigg.reaction/SARCOXp"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00610"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:SARCOX-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1001"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MTOX_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM300__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM22__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM29__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM56__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD67A9839" metaid="_29e42372-9b0a-458d-91d1-6feabd7c10e1" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RNDR4b</html:p><html:p>REACTION: MNXR104067</html:p><html:p>XREFS: bigg:RNDR4b;bigg:R_RNDR4b;deprecated:MNXR55893;deprecated:MNXR69866;deprecated:MNXR84125;seed:rxn09234</html:p><html:p>GENE ASSOCIATION: (bact:GLRX1_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI) or (bact:GLRX2_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI) or (bact:GLRX3_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI) or (bact:GLRX4_ECOLI and bact:RIR3_ECOLI and bact:RIR4_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_29e42372-9b0a-458d-91d1-6feabd7c10e1"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104067"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNDR4b"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNDR4b"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLRX1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLRX2_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLRX3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_GLRX4_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR3_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RIR4_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM17__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90719__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM572__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90831__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD6890A99" metaid="_40934abf-4f1d-431d-ac4c-a3c2420acbc7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLUCYS</html:p><html:p>REACTION: MNXR100074</html:p><html:p>CLASSIFICATION: 6.3.2.2</html:p><html:p>PATHWAYS: kegg:Glutathione metabolism;kegg:Metabolic pathways;metacyc:ergothioneine biosynthesis I (bacteria);metacyc:glutathione biosynthesis;metacyc:homoglutathione biosynthesis</html:p><html:p>XREFS: rhea:13285;rhea:13286;rhea:13287;rhea:13288;bigg:GCL;bigg:GLUCYS;bigg:R_GCL;bigg:R_GLUCYS;deprecated:MNXR32879;kegg:R00894;metacyc:GLUTCYSLIG-RXN;sabiork:1217</html:p><html:p>GENE ASSOCIATION: (bact:GSH1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_40934abf-4f1d-431d-ac4c-a3c2420acbc7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100074"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.2"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13285"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13286"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13287"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/13288"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GCL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLUCYS"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GCL"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLUCYS"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00894"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GLUTCYSLIG-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1217"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GSH1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM55__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89557__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM412__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RD6A3507" metaid="d79251b2-30db-4781-a30a-88ead907a7f7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_SADT2</html:p><html:p>REACTION: MNXR104241</html:p><html:p>CLASSIFICATION: 2.7.7.4</html:p><html:p>XREFS: bigg:R_SADT2;bigg:SADT2;deprecated:MNXR55897;deprecated:MNXR69878;deprecated:MNXR80686;seed:rxn09240;seed:rxn11356</html:p><html:p>GENE ASSOCIATION: (bact:CYSD_ECOLI and bact:CYSN_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d79251b2-30db-4781-a30a-88ead907a7f7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104241"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_SADT2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/SADT2"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CYSD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CYSN_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM51__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM58__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM287__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM30__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RD6CBA3E2" metaid="_33c21cee-49b0-472d-8a96-69244832dcf9" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_BUTSO3tex</html:p><html:p>REACTION: MNXR96351</html:p><html:p>XREFS: bigg:BUTSO3tex;bigg:R_BUTSO3tex;deprecated:MNXR55117;seed:rxn08182</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_33c21cee-49b0-472d-8a96-69244832dcf9"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96351"/> - 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xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_86358037-9802-4958-9aab-e4ba0428b2fe"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99019"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_udpglcur_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_udpglcur_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM87__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RD8F16048" metaid="_0943230a-70de-4ba9-8678-61390e6c5cf3" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ACACtex</html:p><html:p>REACTION: MNXR95208</html:p><html:p>XREFS: 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rdf:resource="http://identifiers.org/rhea/29754"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACACtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACACtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ACACtx"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACACtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACACtm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACACtx"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-281"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/12476"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - 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</fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM232__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM42__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM191__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM599__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RDB819F8" metaid="ee31e5d6-fdd2-48c8-9195-f6ca0264aa7f" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_NH4tpp</html:p><html:p>REACTION: MNXR101950</html:p><html:p>XREFS: rhea:28747;rhea:28748;rhea:28749;rhea:28750;bigg:NH4t;bigg:NH4tex;bigg:NH4ti;bigg:NH4tm;bigg:NH4tn;bigg:NH4tp;bigg:NH4tpp;bigg:R_NH4t;bigg:R_NH4tex;bigg:R_NH4ti;bigg:R_NH4tm;bigg:R_NH4tn;bigg:R_NH4tp;bigg:R_NH4tpp;deprecated:MNXR3814;deprecated:MNXR82602;metacyc:RXN-9615;metacyc:TRANS-RXN0-206;metacyc:TRANS-RXN0-544;reactome:R-BTA-444416;reactome:R-CEL-444416;reactome:R-CFA-444416;reactome:R-DDI-444416;reactome:R-DME-444416;reactome:R-DRE-444416;reactome:R-GGA-444416;reactome:R-HSA-444416;reactome:R-MMU-444416;reactome:R-RNO-444416;reactome:R-SSC-444416;reactome:R-TGU-444416;reactome:R-XTR-444416;sabiork:11683;seed:rxn05466;seed:rxn08986;seed:rxn08987;seed:rxn09736;seed:rxn09835;seed:rxn13364</html:p><html:p>GENE ASSOCIATION: (bact:AMTB_ECOLI) or (SPONTANEOUS)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#ee31e5d6-fdd2-48c8-9195-f6ca0264aa7f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101950"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28747"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28748"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28749"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28750"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4ti"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NH4tpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4t"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4ti"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tm"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tn"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NH4tpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-9615"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-206"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-544"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-444416"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-444416"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/11683"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_AMTB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_SPONTANEOUS"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM15__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM15__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RDB8AC2D1" metaid="_52ed1c9c-6f9f-4f86-a739-4a682306131d" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FRUptspp</html:p><html:p>REACTION: MNXR138359</html:p><html:p>XREFS: bigg:FRUpts;bigg:FRUptspp;bigg:R_FRUpts;bigg:R_FRUptspp;deprecated:MNXR55437;deprecated:MNXR69017;deprecated:MNXR82881;deprecated:MNXR99661;seed:rxn05560;seed:rxn08536</html:p><html:p>GENE ASSOCIATION: (bact:PT1_ECOLI and bact:PTFAH_ECOLI and bact:PTFBC_ECOLI and bact:PTHP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_52ed1c9c-6f9f-4f86-a739-4a682306131d"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138359"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FRUptspp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FRUpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FRUptspp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTFAH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTFBC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1380__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM145568__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RDC030B61" metaid="_0613ddda-64e9-4f2d-9dc9-f0c984f07ae2" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_VALt2rpp</html:p><html:p>REACTION: MNXR105188</html:p><html:p>XREFS: bigg:R_VALt2m;bigg:R_VALt2r;bigg:R_VALt2rpp;bigg:R_VALth;bigg:VALt2m;bigg:VALt2r;bigg:VALt2rpp;bigg:VALth;deprecated:MNXR29034;deprecated:MNXR5323;seed:rxn05669;seed:rxn09374;seed:rxn09707;seed:rxn11190</html:p><html:p>GENE ASSOCIATION: (bact:BRNQ_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0613ddda-64e9-4f2d-9dc9-f0c984f07ae2"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105188"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_VALt2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_VALt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_VALt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_VALth"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALt2m"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALt2rpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/VALth"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_BRNQ_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM199__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM199__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RDC3600E0" metaid="cfd22a70-3cec-4d86-8719-275e0d522222" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_EAR120x</html:p><html:p>REACTION: MNXR97847</html:p><html:p>CLASSIFICATION: 2.3.1.-</html:p><html:p>XREFS: bigg:EAR120x;bigg:EAR120x_1;bigg:R_EAR120x;bigg:R_EAR120x_1</html:p><html:p>GENE ASSOCIATION: (bact:FABI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#cfd22a70-3cec-4d86-8719-275e0d522222"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97847"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR120x"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR120x_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EAR120x"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EAR120x_1"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FABI_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23842__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89851__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RDC488100" metaid="b158851b-0755-4f01-b80a-ce4189a44cdc" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_glcr_e</html:p><html:p>REACTION: MNXR98575</html:p><html:p>XREFS: bigg:EX_glcr_e;bigg:R_EX_glcr_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b158851b-0755-4f01-b80a-ce4189a44cdc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98575"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcr_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_glcr_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM744__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RDC4FA208" metaid="_8b488c8a-56f8-4994-b353-1eea6065a648" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_cys__D_e</html:p><html:p>REACTION: MNXR98388</html:p><html:p>XREFS: bigg:EX_cys__D_e;bigg:R_EX_cys__D_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8b488c8a-56f8-4994-b353-1eea6065a648"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98388"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_cys__D_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_cys__D_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2112__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RDC617E3F" metaid="e355385a-7ba9-4053-a95e-ad88a525b2c2" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MLTGY4pp</html:p><html:p>REACTION: MNXR101629</html:p><html:p>XREFS: bigg:MLTGY4pp;bigg:R_MLTGY4pp;deprecated:MNXR3577;deprecated:MNXR69467;seed:rxn08940</html:p><html:p>GENE ASSOCIATION: (bact:EMTA_ECOLI) or (bact:MLTA_ECOLI) or (bact:MLTB_ECOLI) or (bact:MLTC_ECOLI) or (bact:SLT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e355385a-7ba9-4053-a95e-ad88a525b2c2"> - <bqbiol:is> - 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM963__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM341__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE419FDFA" metaid="a6c691b9-c4ca-49aa-97a3-53fc32439195" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_enter_e</html:p><html:p>REACTION: MNXR98449</html:p><html:p>XREFS: bigg:EX_enter_e;bigg:R_EX_enter_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a6c691b9-c4ca-49aa-97a3-53fc32439195"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98449"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_enter_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_enter_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM883__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE43DE9A6" metaid="_1e9d97b1-efe4-4487-b5eb-0a9f273914f9" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_3OAS180</html:p><html:p>REACTION: MNXR94961</html:p><html:p>CLASSIFICATION: 2.3.1.41</html:p><html:p>XREFS: 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stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM212__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE4649A6C_2" metaid="c39b20e0-cafc-4f26-a828-59b4e0f6a524" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ADNt2pp</html:p><html:p>REACTION: MNXR95461</html:p><html:p>XREFS: rhea:29987;rhea:29988;rhea:29989;rhea:29990;bigg:ADNt2;bigg:ADNt2pp;bigg:R_ADNt2;bigg:R_ADNt2pp;deprecated:MNXR491;metacyc:TRANS-RXN-108A;metacyc:TRANS-RXN-203;seed:rxn05318;seed:rxn08068</html:p><html:p>GENE ASSOCIATION: (bact:NUPC_ECOLI) or (bact:NUPG_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/rhea/29369"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29370"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD4e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD4l"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NTD4pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD4e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD4l"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NTD4pp"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00511"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:RXN-14026"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/211"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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rhea:34919;rhea:34920;rhea:34921;rhea:34922;reactome:R-BTA-199626;reactome:R-CEL-199626;reactome:R-CFA-199626;reactome:R-DDI-199626;reactome:R-DME-199626;reactome:R-DRE-199626;reactome:R-GGA-199626;reactome:R-HSA-199626;reactome:R-MMU-199626;reactome:R-RNO-199626;reactome:R-SSC-199626;reactome:R-TGU-199626;reactome:R-XTR-199626</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_36685efc-1d96-4ef6-be71-06110bdc7eab"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104831"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34919"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34920"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34921"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/34922"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DDI-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-199626"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-199626"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM322__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RE4997104" metaid="_6ad2787b-9023-4fa4-9fe3-242365c455f8" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARGtex</html:p><html:p>REACTION: MNXR95951</html:p><html:p>XREFS: rhea:32143;rhea:32144;rhea:32145;rhea:32146;bigg:ARG_Ltm;bigg:ARGt5r;bigg:ARGtex;bigg:R_ARG_Ltm;bigg:R_ARGt5r;bigg:R_ARGtex;deprecated:MNXR788;metacyc:RXN66-448;sabiork:7983;seed:rxn08155;seed:rxn10840</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF 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rdf:resource="http://identifiers.org/biocyc/META:RXN66-448"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7983"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM70__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM70__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE4D713D9" metaid="_0518ae17-6f20-413b-a572-a8a588bd7482" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_HEX7</html:p><html:p>REACTION: MNXR138514</html:p><html:p>CLASSIFICATION: 2.7.1.1;2.7.1.2;2.7.1.4</html:p><html:p>PATHWAYS: kegg:Starch and sucrose 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bigg:HEX7;bigg:R_HEX7;deprecated:MNXR100614;deprecated:MNXR130287;kegg:R00760;sabiork:1116;sabiork:8091;seed:rxn00547</html:p><html:p>GENE ASSOCIATION: (bact:MAK_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0518ae17-6f20-413b-a572-a8a588bd7482"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138514"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.1"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.2"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HEX7"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HEX7"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00760"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/1116"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/8091"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_MAK_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1380__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM155029__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE4F3DA53" metaid="_6b537f29-1822-40ec-b47a-de72b03c76f7" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_FA141ACPHi</html:p><html:p>REACTION: MNXR99093</html:p><html:p>CLASSIFICATION: 3.1.2.14</html:p><html:p>XREFS: bigg:FA141ACPHi;bigg:R_FA141ACPHi</html:p><html:p>GENE ASSOCIATION: (bact:ACPH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6b537f29-1822-40ec-b47a-de72b03c76f7"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99093"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.14"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FA141ACPHi"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FA141ACPHi"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ACPH_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM162426__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM641__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM925__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE502D1FD" metaid="_11aa8aae-d9f6-450f-8f15-f9a16fbed83c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_NTD10</html:p><html:p>REACTION: MNXR102029</html:p><html:p>CLASSIFICATION: 3.1.3.5</html:p><html:p>PATHWAYS: metacyc:adenosine nucleotides degradation I;metacyc:urate biosynthesis/inosine 5'-phosphate degradation;seed:Purine_conversions;seed:Purine_conversions/AMP_to_ADP;seed:Purine_conversions/AMP_to_Hypoxanthine;seed:Purine_conversions/Adenine_to_AMP;seed:Purine_conversions/GDP_to_GTP;seed:Purine_conversions/GMP_to_GDP;seed:Purine_conversions/GMP_to_Guanine;seed:Purine_conversions/IMP_to_AMP;seed:Purine_conversions/IMP_to_GMP;seed:Purine_conversions/IMP_to_Hypoxanthine;seed:Purine_conversions/dADP_to_dAMP;seed:Purine_conversions/dGDP_to_dGMP</html:p><html:p>XREFS: rhea:28530;rhea:28531;rhea:28532;rhea:28533;deprecated:MNXR3872;metacyc:XMPXAN-RXN;sabiork:129;seed:rxn01961</html:p><html:p>GENE ASSOCIATION: (bact:SURE_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_11aa8aae-d9f6-450f-8f15-f9a16fbed83c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102029"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28530"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28531"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28532"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28533"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:XMPXAN-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/129"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SURE_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM298__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM687__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE53FA2BE" metaid="f8d516e8-f838-4acf-90ec-2e28d182dcb3" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_THRabcpp</html:p><html:p>REACTION: MNXR104849</html:p><html:p>XREFS: bigg:R_THRabc;bigg:R_THRabcpp;bigg:THRabc;bigg:THRabcpp;deprecated:MNXR5066;seed:rxn05169;seed:rxn09301</html:p><html:p>GENE ASSOCIATION: (bact:LIVF_ECOLI and bact:LIVG_ECOLI and bact:LIVH_ECOLI and bact:LIVJ_ECOLI and bact:LIVM_ECOLI)</html:p><html:p>PROP 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<fbc:geneProductRef fbc:geneProduct="G_LIVH_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LIVM_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM142__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM142__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE54C785E" metaid="_8a1911a2-36ba-4c78-9c8a-ec0ce40746a8" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_GALCTNt2pp</html:p><html:p>REACTION: MNXR99960</html:p><html:p>XREFS: rhea:29835;rhea:29836;rhea:29837;rhea:29838;bigg:GALCTNt2pp;bigg:GALCTNt2r;bigg:R_GALCTNt2pp;bigg:R_GALCTNt2r;deprecated:MNXR2503;metacyc:TRANS-RXN-16;seed:rxn08578;seed:rxn10160</html:p><html:p>GENE ASSOCIATION: (bact:DGOT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8a1911a2-36ba-4c78-9c8a-ec0ce40746a8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99960"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29835"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29836"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29837"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29838"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTNt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GALCTNt2r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GALCTNt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GALCTNt2r"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-16"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_DGOT_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1734__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1734__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE55038BE" metaid="_28e105de-0c7c-4a2d-87e5-83bd6db4fd73" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GLYCL</html:p><html:p>REACTION: MNXR100330</html:p><html:p>CLASSIFICATION: 2.1.2.10</html:p><html:p>XREFS: rhea:27758;rhea:27759;rhea:27760;rhea:27761;bigg:GLYCL;bigg:GLYCL_2;bigg:GLYCLm;bigg:GLYS;bigg:R_GLYCL;bigg:R_GLYCL_2;bigg:R_GLYCLm;bigg:R_GLYS;deprecated:MNXR2758</html:p><html:p>GENE ASSOCIATION: (bact:DLDH_ECOLI and bact:GCSH_ECOLI and bact:GCSP_ECOLI and bact:GCST_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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id="RE5B00DCC" metaid="a48e70a5-ddf6-407e-9fd9-cc179dc017bc" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FE2t3pp</html:p><html:p>REACTION: MNXR99506</html:p><html:p>XREFS: rhea:29439;rhea:29440;rhea:29441;rhea:29442;bigg:FE2t3pp;bigg:R_FE2t3pp;metacyc:RXN0-6;seed:rxn08474</html:p><html:p>GENE ASSOCIATION: (bact:FIEF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a48e70a5-ddf6-407e-9fd9-cc179dc017bc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99506"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29439"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29440"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29441"/> - <rdf:li 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rdf:resource="http://identifiers.org/bigg.reaction/R_UAG2E"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UAG2E"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00420"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/875"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_WECB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM47__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM932__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE64B5F73" metaid="_510866d6-78ba-423b-8cf4-729a5c05150a" reversible="false" sboTerm="SBO:0000375"> - <notes> - 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rdf:resource="http://identifiers.org/ec-code/1.5.1.45"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30151"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30152"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30153"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30154"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FADRx2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FADRx2"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09520"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/7292"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CYSI_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CYSJ_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM33__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM38__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE66E0377" metaid="c5c9f129-a03b-48f4-8fd0-82e600646451" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARGabcpp</html:p><html:p>REACTION: MNXR95952</html:p><html:p>CLASSIFICATION: 3.6.3.21</html:p><html:p>XREFS: rhea:29879#1;rhea:29880#1;rhea:29881#1;rhea:29882#1;bigg:ARGabc;bigg:ARGabcpp;bigg:R_ARGabc;bigg:R_ARGabcpp;deprecated:MNXR29066;metacyc:ABC-4-RXN;seed:rxn05154;seed:rxn08151;seed:rxn11236</html:p><html:p>GENE ASSOCIATION: 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<rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARGabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARGabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARGabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-4-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ARGT_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HISM_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HISP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_HISQ_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ARTI_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ARTJ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ARTM_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ARTP_ECOLI"/> - <fbc:geneProductRef 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R_NOtpp</html:p><html:p>REACTION: MNXR101998</html:p><html:p>XREFS: bigg:NODe;bigg:NOt;bigg:NOtex;bigg:NOtpp;bigg:R_NODe;bigg:R_NOt;bigg:R_NOtex;bigg:R_NOtpp;deprecated:MNXR3855</html:p><html:p>GENE ASSOCIATION: (SPONTANEOUS)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#bddad149-bf02-4a07-a762-c66976ca5472"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101998"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NODe"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/NOtpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NODe"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NOt"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NOtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_NOtpp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_SPONTANEOUS"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM228__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM228__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE6A301F1" metaid="a942baae-1095-40b6-89e8-916ce66ff5ae" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AACPS3</html:p><html:p>REACTION: MNXR95142</html:p><html:p>CLASSIFICATION: 6.2.1.20</html:p><html:p>XREFS: bigg:AACPS3;bigg:AACPS3_1;bigg:R_AACPS3;bigg:R_AACPS3_1;deprecated:MNXR50753</html:p><html:p>GENE ASSOCIATION: (bact:AAS_ECOLI and bact:ACP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a942baae-1095-40b6-89e8-916ce66ff5ae"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95142"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AACPS3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AACPS3_1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AACPS3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AACPS3_1"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_AAS_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ACP_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM108__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM925__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM11__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2026__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE6A6232B" metaid="_0afd2e09-6d67-40d0-8e83-781ccbab753e" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_OPHHX3</html:p><html:p>REACTION: MNXR102204</html:p><html:p>XREFS: bigg:OPHHX3;bigg:R_OPHHX3;deprecated:MNXR3981;seed:rxn09045</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0afd2e09-6d67-40d0-8e83-781ccbab753e"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR102204"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/OPHHX3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_OPHHX3"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1886__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="3"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="3"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1635__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="2"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE6E0D26E" metaid="c418ab8f-dfdd-488c-b733-901401a29015" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_gthrd_e</html:p><html:p>REACTION: MNXR98630</html:p><html:p>XREFS: bigg:EX_gthrd_e;bigg:R_EX_gthrd_e;deprecated:MNXR82559</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#c418ab8f-dfdd-488c-b733-901401a29015"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98630"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_gthrd_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_gthrd_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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species="MNXM312__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE8511CB" metaid="_0a95e221-196b-48cf-a4fa-062744ce39b3" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_RIBabcpp</html:p><html:p>REACTION: MNXR104034</html:p><html:p>XREFS: rhea:29903#1;rhea:29904#1;rhea:29905#1;rhea:29906#1;bigg:RIBabc;bigg:RIBabcpp;bigg:R_RIBabc;bigg:R_RIBabcpp;deprecated:MNXR55883;seed:rxn05160;seed:rxn09227</html:p><html:p>GENE ASSOCIATION: (bact:ALSA_ECOLI and bact:ALSB_ECOLI and bact:ALSC_ECOLI) or (bact:RBSA_ECOLI and bact:RBSB_ECOLI and bact:RBSC_ECOLI and bact:RBSD_ECOLI) or (bact:YJFF_ECOLI and bact:YTFQ_ECOLI and bact:YTFR_ECOLI and bact:YTFT_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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fbc:geneProduct="G_ALSA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ALSB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ALSC_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_RBSA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RBSB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RBSC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_RBSD_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_YJFF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YTFQ_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YTFR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_YTFT_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM242__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM242__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE8647B4D" metaid="_63529efd-6fb8-48ed-bbe3-f4ef42904e17" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_U23GAAT</html:p><html:p>REACTION: MNXR138889</html:p><html:p>CLASSIFICATION: 2.3.1.191</html:p><html:p>PATHWAYS: kegg:Lipopolysaccharide biosynthesis;kegg:Metabolic pathways</html:p><html:p>XREFS: bigg:R_U23GAAT;bigg:U23GAAT;deprecated:MNXR36061;kegg:R04550</html:p><html:p>GENE ASSOCIATION: (bact:LPXD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_63529efd-6fb8-48ed-bbe3-f4ef42904e17"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138889"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.191"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_U23GAAT"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/U23GAAT"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04550"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_LPXD_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM722867__64__MNXC3" stoichiometry="1"/> - 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<rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98065"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_4hoxpacd_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_4hoxpacd_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM479__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE87ED27C" metaid="_8171eb8b-0494-410b-8510-9f96f7b2f9bb" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_AGPAT140</html:p><html:p>REACTION: MNXR120588</html:p><html:p>CLASSIFICATION: 2.3.1.51</html:p><html:p>XREFS: deprecated:MNXR68312;deprecated:MNXR81582;seed:rxn08084</html:p><html:p>GENE ASSOCIATION: (bact:PLSC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> 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constant="true" species="MNXM925__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE882DD81" metaid="_62e34619-239c-4d48-9973-ba14c7c686f4" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_EAR180y</html:p><html:p>REACTION: MNXR97860</html:p><html:p>CLASSIFICATION: 1.3.1.10</html:p><html:p>XREFS: bigg:EAR180y;bigg:R_EAR180y;deprecated:MNXR31141</html:p><html:p>GENE ASSOCIATION: (bact:FABI_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_62e34619-239c-4d48-9973-ba14c7c686f4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR97860"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.10"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EAR180y"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EAR180y"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_FABI_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2573__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM6__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM3075__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM5__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE88792FE_1" metaid="b1aa7edb-8655-4a93-aefc-7a7b78efe6bc" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_URIt2pp_copy1;R_URIt2pp_copy2</html:p><html:p>REACTION: MNXR105166</html:p><html:p>XREFS: rhea:29951;rhea:29952;rhea:29953;rhea:29954;bigg:R_URIt2;bigg:R_URIt2pp;bigg:URIt2;bigg:URIt2pp;deprecated:MNXR5310;metacyc:TRANS-RXN-108I;seed:rxn05199;seed:rxn09371</html:p><html:p>GENE ASSOCIATION: (bact:NUPC_ECOLI) or (bact:NUPG_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#b1aa7edb-8655-4a93-aefc-7a7b78efe6bc"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105166"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29951"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29952"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29953"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29954"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_URIt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_URIt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URIt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URIt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108I"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_NUPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NUPG_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM288__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM288__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RE88792FE_2" metaid="be3cd569-1e6b-4123-8a1b-2b7fd6fbb42f" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_URIt2pp_copy1;R_URIt2pp_copy2</html:p><html:p>REACTION: MNXR105166</html:p><html:p>XREFS: rhea:29951;rhea:29952;rhea:29953;rhea:29954;bigg:R_URIt2;bigg:R_URIt2pp;bigg:URIt2;bigg:URIt2pp;deprecated:MNXR5310;metacyc:TRANS-RXN-108I;seed:rxn05199;seed:rxn09371</html:p><html:p>GENE ASSOCIATION: (bact:XAPB_ECOLI)</html:p><html:p>PROP BC-b: mult</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#be3cd569-1e6b-4123-8a1b-2b7fd6fbb42f"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105166"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29951"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29952"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29953"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/29954"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_URIt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_URIt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URIt2"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/URIt2pp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN-108I"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_XAPB_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM288__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM288__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE89FF6D3" metaid="_3ae04260-b57a-46fe-aa5d-b470bc8e6e70" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_f6p_e</html:p><html:p>REACTION: MNXR138291</html:p><html:p>XREFS: bigg:EX_f6p_e;bigg:R_EX_f6p_e;deprecated:MNXR98462</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3ae04260-b57a-46fe-aa5d-b470bc8e6e70"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138291"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_f6p_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_f6p_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM155029__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RE8A02C4B" metaid="_0f55c47e-0847-4061-a34a-9fa7e33a58b2" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_FUMt2_3pp</html:p><html:p>REACTION: MNXR99712</html:p><html:p>XREFS: bigg:FUMt2_3;bigg:FUMt2_3pp;bigg:R_FUMt2_3;bigg:R_FUMt2_3pp;deprecated:MNXR2344;metacyc:TRANS-RXN-299;seed:rxn08543;seed:rxn10158</html:p><html:p>GENE ASSOCIATION: (bact:DCUA_ECOLI) or (bact:DCUB_ECOLI) or (bact:DCUC_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_0f55c47e-0847-4061-a34a-9fa7e33a58b2"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR99712"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUMt2_3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/FUMt2_3pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FUMt2_3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_FUMt2_3pp"/> - <rdf:li 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metaid="_38726afa-c827-4e25-88ca-6a4dcb956bc8" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_TMAtex</html:p><html:p>REACTION: MNXR104884</html:p><html:p>XREFS: bigg:R_TMAtex;bigg:TMAtex;deprecated:MNXR5090;seed:rxn09318</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_38726afa-c827-4e25-88ca-6a4dcb956bc8"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104884"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_TMAtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/TMAtex"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM963__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RECDFC12C" metaid="_68634c65-f47b-49bd-88f0-fb86083d95dc" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_MOAT2</html:p><html:p>REACTION: MNXR101684</html:p><html:p>CLASSIFICATION: 2.4.99.13</html:p><html:p>PATHWAYS: kegg:Lipopolysaccharide biosynthesis;kegg:Metabolic pathways;metacyc:Kdo transfer to lipid IVA I;seed:KDO2-Lipid_A_biosynthesis;seed:KDO2-Lipid_A_biosynthesis/Arabinose5P_and_UDP_N_acetylglucosamine_to_KDO2_Lipid_A;seed:KDO2-Lipid_A_biosynthesis/Ribulose5P_to_Arabinose5P</html:p><html:p>XREFS: rhea:28062;rhea:28063;rhea:28064;rhea:28065;bigg:MOAT2;bigg:R_MOAT2;deprecated:MNXR3620;kegg:R05074;kegg:R06285;metacyc:KDOTRANS2-RXN;seed:rxn03439</html:p><html:p>GENE ASSOCIATION: (bact:KDTA_ECOLI)</html:p><html:p>PROP BC-b: 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- <rdf:li rdf:resource="http://identifiers.org/biocyc/META:KDOTRANS2-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_KDTA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM1206__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM535__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM31__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM824__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RED1711AE" metaid="abd3fe9d-5f3a-4c7d-8d68-75c1edf93a69" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PPCK</html:p><html:p>REACTION: MNXR103099</html:p><html:p>CLASSIFICATION: 4.1.1.49</html:p><html:p>PATHWAYS: kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Carbon fixation in photosynthetic organisms;kegg:Carbon metabolism;kegg:Citrate cycle (TCA cycle);kegg:Glycolysis / Gluconeogenesis;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;kegg:Pyruvate metabolism;metacyc:C4 photosynthetic carbon assimilation cycle, PEPCK type;metacyc:gluconeogenesis I;metacyc:superpathway of glyoxylate cycle and fatty acid 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MNXR126322</html:p><html:p>XREFS: rhea:27922;rhea:27923;rhea:27924;rhea:27925;bigg:DKMPPD;bigg:R_DKMPPD;deprecated:MNXR1613;deprecated:MNXR50864;deprecated:MNXR67304;deprecated:MNXR82298;deprecated:MNXR97497;seed:rxn08348</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#a0de65cf-6326-4ca5-966d-2c364695e32a"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126322"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27922"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27923"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27924"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/27925"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/DKMPPD"/> - <rdf:li 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sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_12PPDRtex</html:p><html:p>REACTION: MNXR94683</html:p><html:p>XREFS: bigg:12PPDRtex;bigg:12PPDRtpp;bigg:R_12PPDRtex;bigg:R_12PPDRtpp;deprecated:MNXR30423;metacyc:TRANS-RXN0-467;seed:rxn07919;seed:rxn07920</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e0870d21-0db3-4aef-a446-c26ce47fefeb"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94683"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/12PPDRtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/12PPDRtpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_12PPDRtex"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_12PPDRtpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:TRANS-RXN0-467"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_OMPC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_OMPN_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PHOE_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM90191__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM90191__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" 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species="MNXM722739__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="REF2EC274" metaid="_435e0ae3-b096-44dc-ae21-c491806ace37" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_TRSARr</html:p><html:p>REACTION: MNXR100682</html:p><html:p>CLASSIFICATION: 1.1.1;1.1.1.60</html:p><html:p>PATHWAYS: kegg:Glyoxylate and dicarboxylate metabolism;kegg:Metabolic pathways;metacyc:glycolate and glyoxylate degradation I</html:p><html:p>XREFS: rhea:18845;rhea:18846;rhea:18847;rhea:18848;bigg:HOXPRm;bigg:HOXPRx;bigg:R_HOXPRm;bigg:R_HOXPRx;bigg:R_TRSARr;bigg:TRSARr;deprecated:MNXR5147;kegg:R01745;metacyc:RXN0-5289</html:p><html:p>GENE ASSOCIATION: (bact:GARR_ECOLI) or (bact:GLXR_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF 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stoichiometry="1"/> - <speciesReference constant="true" species="MNXM475__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="REF50ABE8" metaid="_3d07e4e1-d6c1-46a5-a7f1-f6e3a6726fbc" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_UDPGtex</html:p><html:p>REACTION: MNXR105071</html:p><html:p>XREFS: bigg:R_UDPGtex;bigg:R_r0842;bigg:UDPGtex;bigg:r0842;deprecated:MNXR56005;deprecated:MNXR70034;sabiork:11025;seed:rxn09353</html:p><html:p>GENE ASSOCIATION: (bact:OMPC_ECOLI) or (bact:OMPF_ECOLI) or (bact:OMPN_ECOLI) or (bact:PHOE_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_3d07e4e1-d6c1-46a5-a7f1-f6e3a6726fbc"> - 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stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM52__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="REF714DFC" metaid="e09571cb-aa7c-4565-8d38-afc6ed0edd85" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_glcur_e</html:p><html:p>REACTION: MNXR98577</html:p><html:p>XREFS: bigg:EX_glcur_e;bigg:R_EX_glcur_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e09571cb-aa7c-4565-8d38-afc6ed0edd85"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98577"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_glcur_e"/> - 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<bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR138046"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.1"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.2"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.4"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.55"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.60"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.7"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/AM6PTh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/HEX4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_AM6PTh"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_HEX4"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01326"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/575"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - 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species="MNXM90510__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RF2B04DAF" metaid="_31445681-0a69-408f-9824-586551e86459" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_LPLIPAL2A141</html:p><html:p>REACTION: MNXR101164</html:p><html:p>CLASSIFICATION: 3.1.1.5</html:p><html:p>XREFS: bigg:LPLIPAL2A141;bigg:R_LPLIPAL2A141;deprecated:MNXR50977</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_31445681-0a69-408f-9824-586551e86459"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101164"/> - <rdf:li 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species="MNXM370__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RF8B85B63" metaid="aaa6038d-e536-44c3-a9b9-d48d0bbee969" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CLPNS180pp</html:p><html:p>REACTION: MNXR96787</html:p><html:p>XREFS: bigg:CLPNS180;bigg:CLPNS180pp;bigg:R_CLPNS180;bigg:R_CLPNS180pp;deprecated:MNXR1210</html:p><html:p>GENE ASSOCIATION: (bact:CLSA_ECOLI) or (bact:CLSB_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#aaa6038d-e536-44c3-a9b9-d48d0bbee969"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96787"/> - <rdf:li 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rdf:resource="http://identifiers.org/bigg.reaction/ACACT8r"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACACT8p"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ACACT8r"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_FADA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FADI_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM513__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM21__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM88__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction 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rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100088"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.5"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28098"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28099"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28100"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28101"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GDPDPK"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GDPDPK"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:GDPPYPHOSKIN-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:geneProductRef fbc:geneProduct="G_RELA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_SPOT_ECOLI"/> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM30__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1189__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM14__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RF9FACACB" metaid="_6a91d19e-a107-4c0a-8a5a-6231fe447781" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_UDPGD</html:p><html:p>REACTION: MNXR105063</html:p><html:p>CLASSIFICATION: 1.1.1.22</html:p><html:p>PATHWAYS: kegg:Amino sugar and nucleotide sugar metabolism;kegg:Ascorbate and aldarate metabolism;kegg:Metabolic pathways;kegg:Pentose and glucuronate interconversions;metacyc:UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose);metacyc:teichuronic acid biosynthesis (B. subtilis 168)</html:p><html:p>XREFS: rhea:23596;rhea:23597;rhea:23598;rhea:23599;bigg:R_UDPGD;bigg:UDPGD;deprecated:MNXR24865;deprecated:MNXR70030;deprecated:MNXR90918;kegg:R00286;metacyc:UGD-RXN;reactome:R-ATH-173597;reactome:R-BTA-173597;reactome:R-CEL-173597;reactome:R-CFA-173597;reactome:R-DME-173597;reactome:R-DRE-173597;reactome:R-GGA-173597;reactome:R-HSA-173597;reactome:R-MMU-173597;reactome:R-OSA-173597;reactome:R-RNO-173597;reactome:R-SSC-173597;reactome:R-TGU-173597;reactome:R-XTR-173597;sabiork:784;seed:rxn00211</html:p><html:p>GENE ASSOCIATION: (bact:UDG_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_6a91d19e-a107-4c0a-8a5a-6231fe447781"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR105063"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.22"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/23596"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/23597"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/23598"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/23599"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_UDPGD"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/UDPGD"/> - <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00286"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:UGD-RXN"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-ATH-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-BTA-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CEL-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-CFA-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DME-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-DRE-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-GGA-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-HSA-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-MMU-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-OSA-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-RNO-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-SSC-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-TGU-173597"/> - <rdf:li rdf:resource="http://identifiers.org/reactome/R-XTR-173597"/> - <rdf:li rdf:resource="http://identifiers.org/sabiork.reaction/784"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_UDG_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM52__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM8__64__MNXC3" stoichiometry="2"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="3"/> - <speciesReference constant="true" species="MNXM10__64__MNXC3" stoichiometry="2"/> - <speciesReference constant="true" species="MNXM87__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFA0AD7C1" metaid="_5ea09b2d-1c0f-4536-8918-a99b0f3c2e6c" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_ALPATG160pp</html:p><html:p>REACTION: MNXR95784</html:p><html:p>XREFS: bigg:ALPATG160pp;bigg:R_ALPATG160pp;deprecated:MNXR55031;deprecated:MNXR81665</html:p><html:p>GENE ASSOCIATION: (bact:LNT_ECOLI and bact:LPP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5ea09b2d-1c0f-4536-8918-a99b0f3c2e6c"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR95784"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ALPATG160pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ALPATG160pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_LNT_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_LPP_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM32179__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM92124__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM34740__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7493__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFA1FBDAB" metaid="_050c8150-5d3b-44b6-8dd8-454cba941b55" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CUt3</html:p><html:p>REACTION: MNXR96953</html:p><html:p>XREFS: bigg:CUt3;bigg:R_CUt3;deprecated:MNXR1324;deprecated:MNXR68597</html:p><html:p>GENE ASSOCIATION: (bact:CUSA_ECOLI and bact:CUSB_ECOLI and bact:CUSC_ECOLI and bact:CUSF_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_050c8150-5d3b-44b6-8dd8-454cba941b55"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96953"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CUt3"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CUt3"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_CUSA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CUSB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CUSC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_CUSF_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC2" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3568__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3568__64__MNXC2" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFA2F9E2" metaid="dcec5e81-7227-486a-ad49-405c746f68e4" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ARBabcpp</html:p><html:p>REACTION: MNXR126447</html:p><html:p>CLASSIFICATION: 3.6.3.17</html:p><html:p>XREFS: rhea:30007#1;rhea:30008#1;rhea:30009#1;rhea:30010#1;bigg:ARBabc;bigg:ARBabcpp;bigg:R_ARBabc;bigg:R_ARBabcpp;deprecated:MNXR28939;deprecated:MNXR86939;deprecated:MNXR95935;metacyc:ABC-2-RXN;seed:rxn05173;seed:rxn08139;seed:rxn11063</html:p><html:p>GENE ASSOCIATION: (bact:ARAF_ECOLI and bact:ARAG_ECOLI and bact:ARAH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#dcec5e81-7227-486a-ad49-405c746f68e4"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR126447"/> - <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.17"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30007#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30008#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30009#1"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/30010#1"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/ARBabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARBabc"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_ARBabcpp"/> - <rdf:li rdf:resource="http://identifiers.org/biocyc/META:ABC-2-RXN"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_ARAF_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ARAG_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_ARAH_ECOLI"/> - </fbc:and> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM3__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM461__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM461__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM7__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RFA533034" metaid="dae398b3-3d66-4b9b-b301-c552aa0dc4c4" reversible="true" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_PYRt2rpp</html:p><html:p>REACTION: MNXR103385</html:p><html:p>XREFS: bigg:PYRt2;bigg:PYRt2m;bigg:PYRt2p;bigg:PYRt2rpp;bigg:R_PYRt2;bigg:R_PYRt2m;bigg:R_PYRt2p;bigg:R_PYRt2rpp;deprecated:MNXR4552;reactome:R-GGA-372359;reactome:R-HSA-372342;reactome:R-RNO-372347;seed:rxn05469;seed:rxn09217;seed:rxn09717;seed:rxn09832</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" 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metaid="_96c50476-15ed-4623-96fe-ea2c50cfd396" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CLPNS141pp</html:p><html:p>REACTION: MNXR96783</html:p><html:p>XREFS: bigg:CLPNS141pp;bigg:R_CLPNS141pp;deprecated:MNXR1206</html:p><html:p>GENE ASSOCIATION: (bact:CLSA_ECOLI) or (bact:CLSB_ECOLI)</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_96c50476-15ed-4623-96fe-ea2c50cfd396"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96783"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CLPNS141pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CLPNS141pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - 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MNXR100237</html:p><html:p>XREFS: bigg:GLCpts;bigg:GLCptspp;bigg:R_GLCpts;bigg:R_GLCptspp;deprecated:MNXR55593;deprecated:MNXR69163;deprecated:MNXR93928;seed:rxn05226;seed:rxn08612</html:p><html:p>GENE ASSOCIATION: (bact:PT1_ECOLI and bact:PTGA_ECOLI and bact:PTGCB_ECOLI and bact:PTHP_ECOLI) or (bact:PT1_ECOLI and bact:PTGA_ECOLI and bact:PTHP_ECOLI and bact:PTOCB_ECOLI) or (bact:PT1_ECOLI and bact:PTHP_ECOLI and bact:PTNAB_ECOLI and bact:PTNC_ECOLI and bact:PTND_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_9d4bb2b5-14a5-48e2-b67e-08764706f674"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100237"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLCptspp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCpts"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLCptspp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTGA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTGCB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTGA_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTOCB_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_PT1_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTHP_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNAB_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTNC_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_PTND_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM41__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM73__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM160__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM23__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFC58FF7C" metaid="_1e07e79e-2e09-4faf-b178-4c61ad2c0b97" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_CA2t3pp</html:p><html:p>REACTION: MNXR96437</html:p><html:p>XREFS: bigg:CA2t3pp;bigg:CAt4;bigg:R_CA2t3pp;bigg:R_CAt4;deprecated:MNXR1036;seed:rxn05514;seed:rxn08185</html:p><html:p>GENE ASSOCIATION: (bact:CHAA_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1e07e79e-2e09-4faf-b178-4c61ad2c0b97"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR96437"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CA2t3pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/CAt4"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CA2t3pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_CAt4"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_CHAA_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM128__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM128__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RFC733842" metaid="a7542ffd-5452-4cbe-8f95-293bbebfefae" reversible="true" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_cobalt2_e</html:p><html:p>REACTION: MNXR98356</html:p><html:p>XREFS: bigg:EX_cobalt2_e;bigg:R_EX_cobalt2_e</html:p><html:p>PROP BC-b: bidi</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP 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R_LPLIPAL2G160</html:p><html:p>REACTION: MNXR101193</html:p><html:p>XREFS: bigg:LPLIPAL2G160;bigg:R_LPLIPAL2G160;deprecated:MNXR3321</html:p><html:p>GENE ASSOCIATION: (bact:PLDB_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e7102d35-6c36-4655-8bb6-1ff184df3c07"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR101193"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/LPLIPAL2G160"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_LPLIPAL2G160"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PLDB_ECOLI"/> 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constant="true" species="MNXM15900__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM242__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM9__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RFD0BABE2" metaid="aea3f8b6-346b-4014-b4ce-dd6c001820ac" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_GALKr</html:p><html:p>REACTION: MNXR99985</html:p><html:p>CLASSIFICATION: 2.7.1.6</html:p><html:p>PATHWAYS: kegg:Amino sugar and nucleotide sugar metabolism;kegg:Galactose metabolism;kegg:Metabolic pathways;metacyc:D-galactose degradation I (Leloir pathway);metacyc:D-galactose degradation III;metacyc:D-galactose degradation V (Leloir pathway);metacyc:stachyose 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R_FA120ACPHi</html:p><html:p>GENE ASSOCIATION: (bact:ACPH_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_ACPH_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM89851__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM402__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM925__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFD2970A9" metaid="_5f004269-a488-43e1-84e6-a138c5fcc947" reversible="false" sboTerm="SBO:0000185"> - <notes> - <html:p>SOURCE: R_ABUTt2pp</html:p><html:p>REACTION: MNXR94994</html:p><html:p>XREFS: rhea:28915;rhea:28916;rhea:28917;rhea:28918;bigg:4ABUTthi;bigg:4ABUTtmi;bigg:ABUTt2pp;bigg:ABUTt2r;bigg:ABUTt2rL;bigg:R_4ABUTthi;bigg:R_4ABUTtmi;bigg:R_ABUTt2pp;bigg:R_ABUTt2r;bigg:R_ABUTt2rL;metacyc:TRANS-RXN-57;seed:rxn05564;seed:rxn08027</html:p><html:p>GENE ASSOCIATION: (bact:GABP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_5f004269-a488-43e1-84e6-a138c5fcc947"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR94994"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28915"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28916"/> - <rdf:li rdf:resource="http://identifiers.org/rhea/28917"/> - 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xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_GABP_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM01__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM192__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM01__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM192__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFD2B70CB" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PLIPA2A161pp</html:p><html:p>GENE ASSOCIATION: (bact:PA1_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef fbc:geneProduct="G_PA1_ECOLI"/> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM2__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM90510__64__MNXC19" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM1__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM162245__64__MNXC19" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM91047__64__MNXC19" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFD2C97DE" metaid="_2c0c2c31-e26f-4cf5-96af-2a84db842331" reversible="false" sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_dcmp_e</html:p><html:p>REACTION: MNXR98400</html:p><html:p>XREFS: 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sboTerm="SBO:0000627"> - <notes> - <html:p>SOURCE: R_EX_23cump_e</html:p><html:p>REACTION: MNXR98002</html:p><html:p>XREFS: bigg:EX_23cump_e;bigg:R_EX_23cump_e</html:p><html:p>PROP BC-p: orph</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-t: boun</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#e43ce2c3-5998-44b6-82aa-77c32f1fa20b"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR98002"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/EX_23cump_e"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_EX_23cump_e"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3150__64__MNXC2" stoichiometry="1"/> - </listOfReactants> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFD334FED" metaid="e54cb4ff-ece1-4cb5-be8b-10dcc80c7625" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_CYTD</html:p><html:p>REACTION: MNXR97039</html:p><html:p>CLASSIFICATION: 3.5.4.5</html:p><html:p>PATHWAYS: kegg:Metabolic pathways;kegg:Pyrimidine metabolism;metacyc:pyrimidine ribonucleosides degradation;metacyc:pyrimidine ribonucleosides salvage I;metacyc:pyrimidine ribonucleosides salvage II;seed:pyrimidine_conversions;seed:pyrimidine_conversions/CMP_to_Uracil;seed:pyrimidine_conversions/CTP_to_CMP;seed:pyrimidine_conversions/UMP_to_UTP;seed:pyrimidine_conversions/UMP_to_Uracil;seed:pyrimidine_conversions/UTP_to_CTP;seed:pyrimidine_conversions/dCMP_to_dTMP;seed:pyrimidine_conversions/dCTP_to_dCMP;seed:pyrimidine_conversions/dTMP_to_Thymine;seed:pyrimidine_conversions/dTMP_to_dTTP</html:p><html:p>XREFS: 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species="MNXM9__64__MNXC19" stoichiometry="6"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B__999999" fbc:upperFluxBound="B_999999" id="RFDE90BF1" metaid="_31decb20-df97-44ac-8a95-27cfa1a8d410" reversible="true" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_PGK</html:p><html:p>REACTION: MNXR102538</html:p><html:p>CLASSIFICATION: 2.7.2.3</html:p><html:p>PATHWAYS: kegg:Biosynthesis of amino acids;kegg:Biosynthesis of antibiotics;kegg:Biosynthesis of secondary metabolites;kegg:Carbon fixation in photosynthetic organisms;kegg:Carbon metabolism;kegg:Glycolysis / Gluconeogenesis;kegg:Metabolic pathways;kegg:Microbial metabolism in diverse environments;metacyc:1-butanol autotrophic biosynthesis (engineered);metacyc:Bifidobacterium shunt;metacyc:Calvin-Benson-Bassham cycle;metacyc:formaldehyde assimilation III (dihydroxyacetone cycle);metacyc:gluconeogenesis I;metacyc:gluconeogenesis III;metacyc:glycerol degradation to butanol;metacyc:glycolysis I 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R_GLYCLTt4pp</html:p><html:p>REACTION: MNXR100335</html:p><html:p>XREFS: bigg:GLYCLTt4pp;bigg:R_GLYCLTt4pp;deprecated:MNXR2762;seed:rxn08652</html:p><html:p>GENE ASSOCIATION: (bact:ACTP_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: tran</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#d9531f0c-458d-46a5-af33-8bf73d4f75c2"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR100335"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/GLYCLTt4pp"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_GLYCLTt4pp"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:geneProductRef 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reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_THDPS</html:p><html:p>REACTION: MNXR104806</html:p><html:p>CLASSIFICATION: 2.3.1.117</html:p><html:p>PATHWAYS: metacyc:L-lysine biosynthesis I;seed:Lysine_Biosynthesis_DAP_Pathway;seed:Lysine_Biosynthesis_DAP_Pathway/Aspartate_to_Diaminoheptanedioate;seed:Lysine_Biosynthesis_DAP_Pathway/Diaminoheptanedioate_to_Lysine</html:p><html:p>XREFS: rhea:17325;rhea:17326;rhea:17327;rhea:17328;deprecated:MNXR5036;deprecated:MNXR64196;metacyc:TETHYDPICSUCC-RXN;seed:rxn03031</html:p><html:p>GENE ASSOCIATION: (bact:DAPD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_1a2f85d9-8dce-41de-8e68-f055be53c0fe"> - <bqbiol:is> - <rdf:Bag> - <rdf:li 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</listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM12__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM1563__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="B_0" fbc:upperFluxBound="B_999999" id="RFFF0833A" metaid="_8b229e2e-f244-4e35-aa3b-4b6df47ea582" reversible="false" sboTerm="SBO:0000375"> - <notes> - <html:p>SOURCE: R_RNTR3c</html:p><html:p>REACTION: MNXR104077</html:p><html:p>XREFS: bigg:RNTR3c;bigg:R_RNTR3c;deprecated:MNXR32351</html:p><html:p>GENE ASSOCIATION: (bact:FENR_ECOLI and bact:FLAV_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FENR_ECOLI and bact:FLAW_ECOLI and bact:NRDD_ECOLI and bact:NRDG_ECOLI) or (bact:FLAV_ECOLI and bact:NRDD_ECOLI) or (bact:FLAW_ECOLI and bact:NRDD_ECOLI)</html:p><html:p>PROP BC-b: oned</html:p><html:p>PROP BC-p: asso</html:p><html:p>PROP BC-t: enzy</html:p> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#_8b229e2e-f244-4e35-aa3b-4b6df47ea582"> - <bqbiol:is> - <rdf:Bag> - <rdf:li rdf:resource="http://identifiers.org/metanetx.reaction/MNXR104077"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/RNTR3c"/> - <rdf:li rdf:resource="http://identifiers.org/bigg.reaction/R_RNTR3c"/> - </rdf:Bag> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - <fbc:geneProductAssociation xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2"> - <fbc:or> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FENR_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDG_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAV_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - <fbc:and> - <fbc:geneProductRef fbc:geneProduct="G_FLAW_ECOLI"/> - <fbc:geneProductRef fbc:geneProduct="G_NRDD_ECOLI"/> - </fbc:and> - </fbc:or> - </fbc:geneProductAssociation> - <listOfReactants> - <speciesReference constant="true" species="MNXM3707__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM63__64__MNXC3" stoichiometry="1"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="MNXM2__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM360__64__MNXC3" stoichiometry="1"/> - <speciesReference constant="true" species="MNXM4076__64__MNXC3" stoichiometry="1"/> - </listOfProducts> - </reaction> - </listOfReactions> - </model> -</sbml>
--- a/test-data/sink.csv Mon Jan 03 15:34:21 2022 +0000 +++ b/test-data/sink.csv Tue Jan 11 10:26:50 2022 +0000 @@ -1,630 +1,343 @@ "Name","InChI" -"MNXM3","InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)" -"MNXM1","InChI=1S/p+1" -"MNXM7","InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)" -"MNXM790","InChI=1S/C6H10N3O4P/c1-4-8-2-5(6(7)9-4)3-13-14(10,11)12/h2H,3H2,1H3,(H2,7,8,9)(H2,10,11,12)" -"MNXM13","InChI=1S/CO2/c2-1-3" -"MNXM188","InChI=1S/C7H7NO2/c8-6-4-2-1-3-5(6)7(9)10/h1-4H,8H2,(H,9,10)" -"MNXM91","InChI=1S/C5H13O14P3/c6-3-2(1-16-20(8,9)10)17-5(4(3)7)18-22(14,15)19-21(11,12)13/h2-7H,1H2,(H,14,15)(H2,8,9,10)(H2,11,12,13)" -"MNXM11","InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)" -"MNXM1489","InChI=1S/C12H16NO9P/c14-9-8(5-21-23(18,19)20)22-11(10(9)15)13-7-4-2-1-3-6(7)12(16)17/h1-4,8-11,13-15H,5H2,(H,16,17)(H2,18,19,20)" -"MNXM30","InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)" +"MNXM23","InChI=1S/C3H4O3/c1-2(4)3(5)6/h1H3,(H,5,6)" +"MNXM325","InChI=1S/C6H13O10P/c7-2(1-16-17(13,14)15)3(8)4(9)5(10)6(11)12/h2-5,7-10H,1H2,(H,11,12)(H2,13,14,15)" +"MNXM341","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" +"MNXM295","InChI=1S/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)" +"MNXM722710","InChI=1S/C15H24N2O17P2/c18-3-5-8(20)10(22)12(24)14(32-5)33-36(28,29)34-35(26,27)30-4-6-9(21)11(23)13(31-6)17-2-1-7(19)16-15(17)25/h1-2,5-6,8-14,18,20-24H,3-4H2,(H,26,27)(H,28,29)(H,16,19,25)" +"MNXM145568","InChI=1S/C6H13O9P/c7-1-3-4(8)5(9)6(10,15-3)2-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)" +"MNXM435","InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2" +"MNXM427","InChI=1S/C6H13O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h1,3-6,8-11H,2H2,(H2,12,13,14)" +"MNXM721","InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)" +"MNXM51","InChI=1S/C10H16N5O14P3/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(27-9)1-26-31(22,23)29-32(24,25)28-30(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H3,11,13,14,18)" "MNXM82","InChI=1S/C16H25N5O16P2/c17-16-19-12-6(13(28)20-16)18-3-21(12)14-10(26)8(24)5(34-14)2-33-38(29,30)37-39(31,32)36-15-11(27)9(25)7(23)4(1-22)35-15/h3-5,7-11,14-15,22-27H,1-2H2,(H,29,30)(H,31,32)(H3,17,19,20,28)" -"MNXM9","InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)" -"MNXM2","InChI=1S/H2O/h1H2" -"MNXM1351","InChI=1S/C15H25N5O20P4/c16-12-7-13(18-4-19(12)14-10(23)8(21)5(37-14)1-35-41(25,26)27)20(3-17-7)15-11(24)9(22)6(38-15)2-36-43(31,32)40-44(33,34)39-42(28,29)30/h3-6,8-11,14-16,21-24H,1-2H2,(H,31,32)(H,33,34)(H2,25,26,27)(H2,28,29,30)" -"MNXM66","InChI=1S/C3H9O6P/c4-1-3(5)2-9-10(6,7)8/h3-5H,1-2H2,(H2,6,7,8)" -"MNXM31","InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)" -"MNXM26","InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)" -"MNXM27","InChI=1S/Na/q+1" -"MNXM334","InChI=1S/C10H12N4O5/c15-1-4-6(16)7(17)10(19-4)14-3-13-5-8(14)11-2-12-9(5)18/h2-4,6-7,10,15-17H,1H2,(H,11,12,18)" -"MNXM125","InChI=1S/C10H13N4O8P/c15-6-4(1-21-23(18,19)20)22-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,11,12,17)(H2,18,19,20)" -"MNXM32180","InChI=1S/C38H76O13P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-37(40)47-33-36(34-50-53(45,46)49-32-35(39)31-48-52(42,43)44)51-38(41)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h35-36,39H,3-34H2,1-2H3,(H,45,46)(H2,42,43,44)" -"MNXM460","InChI=1S/C3H6O3/c4-1-3(6)2-5/h4-5H,1-2H2" -"MNXM74","InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h1,3,5H,2H2,(H2,6,7,8)" -"MNXM118","InChI=1S/C4H12N2/c5-3-1-2-4-6/h1-6H2" +"MNXM89795","InChI=1S/C15H24N2O17P2/c18-3-5-8(20)10(22)12(24)14(32-5)33-36(28,29)34-35(26,27)30-4-6-9(21)11(23)13(31-6)17-2-1-7(19)16-15(17)25/h1-2,5-6,8-14,18,20-24H,3-4H2,(H,26,27)(H,28,29)(H,16,19,25)" +"MNXM121","InChI=1S/C9H15N2O15P3/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H,10,12,15)(H2,16,17,18)" +"MNXM41","InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2" +"MNXM42","InChI=1S/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)" +"MNXM448","InChI=1S/C12H23O14P/c13-1-3-5(14)7(16)9(18)11(24-3)26-12-10(19)8(17)6(15)4(25-12)2-23-27(20,21)22/h3-19H,1-2H2,(H2,20,21,22)" +"MNXM17","InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)" +"MNXM37","InChI=1S/C5H10N2O3/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H2,7,8)(H,9,10)" +"MNXM370","InChI=1S/C6H14NO8P/c7-3-5(9)4(8)2(15-6(3)10)1-14-16(11,12)13/h2-6,8-10H,1,7H2,(H2,11,12,13)" "MNXM89557","InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)" -"MNXM1668","InChI=1S/C9H19N3O3/c10-5-1-2-6-12-8(13)4-3-7(11)9(14)15/h7H,1-6,10-11H2,(H,12,13)(H,14,15)" -"MNXM38","InChI=1S/C27H35N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,32,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H2,33,34,42,43)" -"MNXM7354","InChI=1S/C30H27N3O15/c34-19-7-1-4-13(22(19)37)25(40)31-16-10-46-29(44)18(33-27(42)15-6-3-9-21(36)24(15)39)12-48-30(45)17(11-47-28(16)43)32-26(41)14-5-2-8-20(35)23(14)38/h1-9,16-18,34-39H,10-12H2,(H,31,40)(H,32,41)(H,33,42)" -"MNXM111","InChI=1S/Fe/q+2" -"MNXM33","InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H5,28,29,30,34,42,43,44,45,46,47)/p+1" -"MNXM883","InChI=1S/C30H27N3O15/c34-19-7-1-4-13(22(19)37)25(40)31-16-10-46-29(44)18(33-27(42)15-6-3-9-21(36)24(15)39)12-48-30(45)17(11-47-28(16)43)32-26(41)14-5-2-8-20(35)23(14)38/h1-9,16-18,34-39H,10-12H2,(H,31,40)(H,32,41)(H,33,42)" -"MNXM164143","InChI=1S/C7H12O5/c1-4(2)7(12,6(10)11)3-5(8)9/h4,12H,3H2,1-2H3,(H,8,9)(H,10,11)" -"MNXM1706","InChI=1S/C7H10O4/c1-4(2)5(7(10)11)3-6(8)9/h3-4H,1-2H3,(H,8,9)(H,10,11)" -"MNXM158","InChI=1S/C4H4N2O2/c7-3-1-2-5-4(8)6-3/h1-2H,(H2,5,6,7,8)" -"MNXM492","InChI=1S/C9H12N2O5/c12-4-6-5(13)3-8(16-6)11-2-1-7(14)10-9(11)15/h1-2,5-6,8,12-13H,3-4H2,(H,10,14,15)" -"MNXM1135","InChI=1S/C6H11N3O7P2/c1-4-8-2-5(6(7)9-4)3-15-18(13,14)16-17(10,11)12/h2H,3H2,1H3,(H,13,14)(H2,7,8,9)(H2,10,11,12)" -"MNXM960","InChI=1S/C6H10NO4PS/c1-5-6(13-4-7-5)2-3-11-12(8,9)10/h4H,2-3H2,1H3,(H2,8,9,10)" -"MNXM662","InChI=1S/C12H17N4O4PS/c1-8-11(3-4-20-21(17,18)19)22-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H3-,13,14,15,17,18,19)/p+1" -"MNXM6","InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)" -"MNXM1565","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" -"MNXM5","InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/p+1" -"MNXM34808","InChI=1S/C17H36NO7P/c1-2-3-4-5-6-7-8-9-10-11-17(20)25-16(14-19)15-24-26(21,22)23-13-12-18/h16,19H,2-15,18H2,1H3,(H,21,22)" -"MNXM402","InChI=1S/C12H24O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h2-11H2,1H3,(H,13,14)" -"MNXM14","InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)" -"MNXM53","InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)" -"MNXM866","InChI=1S/C11H14NO6P/c13-10(6-18-19(15,16)17)11(14)8-5-12-9-4-2-1-3-7(8)9/h1-5,10-14H,6H2,(H2,15,16,17)" -"MNXM94","InChI=1S/C11H12N2O2/c12-9(11(14)15)5-7-6-13-10-4-2-1-3-8(7)10/h1-4,6,9,13H,5,12H2,(H,14,15)" -"MNXM168","InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10)" -"MNXM625","InChI=1S/C10H13N5O3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(17)6(2-16)18-7/h3-7,16-17H,1-2H2,(H2,11,12,13)" -"MNXM10","InChI=1S/C21H29N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1,3-4,7-8,10-11,13-16,20-21,29-32H,2,5-6H2,(H2,23,33)(H,34,35)(H,36,37)(H2,22,24,25)" -"MNXM1744","InChI=1S/C3H6O2/c1-3(5)2-4/h4H,2H2,1H3" -"MNXM8","InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/p+1" -"MNXM90191","InChI=1S/C3H8O2/c1-3(5)2-4/h3-5H,2H2,1H3" -"MNXM704","InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)" -"MNXM377","InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H" -"MNXM360","InChI=1S/C9H16N3O13P3/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(23-8)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H,20,21)(H2,10,11,14)(H2,15,16,17)" -"MNXM411","InChI=1S/C9H15N3O10P2/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(21-8)4-20-24(18,19)22-23(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H2,10,11,14)(H2,15,16,17)" -"MNXM529","InChI=1S/C7H14N2O4/c8-4(6(10)11)2-1-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)" -"MNXM1017","InChI=1S/C4H8O/c1-2-3-4-5/h4H,2-3H2,1H3" -"MNXM458","InChI=1S/C4H8O2/c1-2-3-4(5)6/h2-3H2,1H3,(H,5,6)" -"MNXM199","InChI=1S/C5H11NO2/c1-3(2)4(6)5(7)8/h3-4H,6H2,1-2H3,(H,7,8)" -"MNXM20","InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)" -"MNXM238","InChI=1S/C5H8O3/c1-3(2)4(6)5(7)8/h3H,1-2H3,(H,7,8)" -"MNXM2125","InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)" -"MNXM29","InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)" -"MNXM75","InChI=1S/C2H4O/c1-2-3/h2H,1H3" -"MNXM417","InChI=1S/C6H14O12P2/c7-4-3(1-16-19(10,11)12)18-6(9,5(4)8)2-17-20(13,14)15/h3-5,7-9H,1-2H2,(H2,10,11,12)(H2,13,14,15)" -"MNXM75116","InChI=1S/C42H82NO10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-40(44)50-35-38(36-51-54(48,49)52-37-39(43)42(46)47)53-41(45)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h38-39H,3-37,43H2,1-2H3,(H,46,47)(H,48,49)" -"MNXM31536","InChI=1S/C41H82NO8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-40(43)47-37-39(38-49-51(45,46)48-36-35-42)50-41(44)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h39H,3-38,42H2,1-2H3,(H,45,46)" -"MNXM75132","InChI=1S/C124H227N2O54P3/c1-7-13-19-25-31-37-38-44-50-56-62-68-96(141)166-84(66-60-54-48-42-35-29-23-17-11-5)72-98(143)170-114-100(126-94(139)71-83(65-59-53-47-41-34-28-22-16-10-4)165-95(140)67-61-55-49-43-36-30-24-18-12-6)117(163-79-91-102(145)113(169-97(142)70-82(132)64-58-52-46-40-33-27-21-15-9-3)99(118(167-91)180-183(160,161)162)125-93(138)69-81(131)63-57-51-45-39-32-26-20-14-8-2)168-92(112(114)178-181(154,155)156)80-164-123(121(150)151)74-90(175-124(122(152)153)73-85(133)101(144)108(176-124)87(135)76-128)111(110(177-123)89(137)78-130)173-120-106(149)115(105(148)107(171-120)86(134)75-127)174-119-104(147)103(146)116(179-182(157,158)159)109(172-119)88(136)77-129/h81-92,99-120,127-137,144-149H,7-80H2,1-6H3,(H,125,138)(H,126,139)(H,150,151)(H,152,153)(H2,154,155,156)(H2,157,158,159)(H2,160,161,162)" -"MNXM857","InChI=1S/C17H27N5O16P2/c18-14-7-15(20-3-19-14)22(4-21-7)16-11(28)8(25)6(35-16)2-34-39(30,31)38-40(32,33)37-17-12(29)9(26)10(27)13(36-17)5(24)1-23/h3-6,8-13,16-17,23-29H,1-2H2,(H,30,31)(H,32,33)(H2,18,19,20)" -"MNXM56168","InChI=1S/C131H239N2O60P3/c1-7-13-19-25-31-37-38-44-50-56-62-68-98(149)178-85(66-60-54-48-42-35-29-23-17-11-5)72-100(151)182-120-102(133-96(147)71-84(65-59-53-47-41-34-28-22-16-10-4)177-97(148)67-61-55-49-43-36-30-24-18-12-6)123(175-80-93-104(153)119(181-99(150)70-83(139)64-58-52-46-40-33-27-21-15-9-3)101(124(179-93)193-196(171,172)173)132-95(146)69-82(138)63-57-51-45-39-32-26-20-14-8-2)180-94(118(120)191-194(165,166)167)81-176-130(128(161)162)74-92(188-131(129(163)164)73-86(140)103(152)114(189-131)89(143)77-136)117(116(190-130)90(144)78-137)186-127-111(160)121(110(159)113(184-127)88(142)76-135)187-126-109(158)107(156)122(192-195(168,169)170)115(185-126)91(145)79-174-125-108(157)105(154)106(155)112(183-125)87(141)75-134/h82-94,101-127,134-145,152-160H,7-81H2,1-6H3,(H,132,146)(H,133,147)(H,161,162)(H,163,164)(H2,165,166,167)(H2,168,169,170)(H2,171,172,173)" -"MNXM21","InChI=1S/C23H38N7O17P3S/c1-12(31)51-7-6-25-14(32)4-5-26-21(35)18(34)23(2,3)9-44-50(41,42)47-49(39,40)43-8-13-17(46-48(36,37)38)16(33)22(45-13)30-11-29-15-19(24)27-10-28-20(15)30/h10-11,13,16-18,22,33-34H,4-9H2,1-3H3,(H,25,32)(H,26,35)(H,39,40)(H,41,42)(H2,24,27,28)(H2,36,37,38)" -"MNXM12","InChI=1S/C21H36N7O16P3S/c1-21(2,16(31)19(32)24-4-3-12(29)23-5-6-48)8-41-47(38,39)44-46(36,37)40-7-11-15(43-45(33,34)35)14(30)20(42-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-31,48H,3-8H2,1-2H3,(H,23,29)(H,24,32)(H,36,37)(H,38,39)(H2,22,25,26)(H2,33,34,35)" -"MNXM1423","InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h3-5,7,9-11H,1H2,(H,12,13)" -"MNXM48464","InChI=1S/C6H10O7/c7-1-2(8)4(5(10)11)13-6(12)3(1)9/h1-4,6-9,12H,(H,10,11)" -"MNXM218","InChI=1S/C2H7NO/c3-1-2-4/h4H,1-3H2" -"MNXM15","InChI=1S/H3N/h1H3" -"MNXM42","InChI=1S/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)" -"MNXM147","InChI=1S/C4H8N2O3/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H2,6,7)(H,8,9)" -"MNXM364","InChI=1S/C9H17NO5/c1-9(2,5-11)7(14)8(15)10-4-3-6(12)13/h7,11,14H,3-5H2,1-2H3,(H,10,15)(H,12,13)" -"MNXM16","InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/p+1" -"MNXM114087","InChI=1S/C4H7NO3/c1-2(6)3(5)4(7)8/h3H,5H2,1H3,(H,7,8)" -"MNXM1106","InChI=1S/C3H7NO/c1-3(5)2-4/h2,4H2,1H3" +"MNXM969","InChI=1S/C6H14NO8P/c7-3-5(10)4(9)2(1-8)14-6(3)15-16(11,12)13/h2-6,8-10H,1,7H2,(H2,11,12,13)" +"MNXM91871","InChI=1S/C8H16NO9P/c1-3(11)9-5-7(13)6(12)4(2-10)17-8(5)18-19(14,15)16/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H2,14,15,16)" +"MNXM47","InChI=1S/C17H27N3O17P2/c1-6(22)18-10-13(26)11(24)7(4-21)35-16(10)36-39(31,32)37-38(29,30)33-5-8-12(25)14(27)15(34-8)20-3-2-9(23)19-17(20)28/h2-3,7-8,10-16,21,24-27H,4-5H2,1H3,(H,18,22)(H,29,30)(H,31,32)(H,19,23,28)" +"MNXM1688","InChI=1S/C20H29N3O19P2/c1-7(18(30)31)38-16-12(21-8(2)25)19(40-9(5-24)14(16)28)41-44(35,36)42-43(33,34)37-6-10-13(27)15(29)17(39-10)23-4-3-11(26)22-20(23)32/h3-4,9-10,12-17,19,24,27-29H,1,5-6H2,2H3,(H,21,25)(H,30,31)(H,33,34)(H,35,36)(H,22,26,32)" +"MNXM722733","InChI=1S/C20H31N3O19P2/c1-7(18(30)31)38-16-12(21-8(2)25)19(40-9(5-24)14(16)28)41-44(35,36)42-43(33,34)37-6-10-13(27)15(29)17(39-10)23-4-3-11(26)22-20(23)32/h3-4,7,9-10,12-17,19,24,27-29H,5-6H2,1-2H3,(H,21,25)(H,30,31)(H,33,34)(H,35,36)(H,22,26,32)" +"MNXM162233","InChI=1S/C17H27N3O17P2/c1-6(22)18-10-13(26)11(24)7(4-21)35-16(10)36-39(31,32)37-38(29,30)33-5-8-12(25)14(27)15(34-8)20-3-2-9(23)19-17(20)28/h2-3,7-8,10-16,21,24-27H,4-5H2,1H3,(H,18,22)(H,29,30)(H,31,32)(H,19,23,28)" +"MNXM1376","InChI=1S/C16H26N2O16P2/c1-6-3-18(16(25)17-14(6)24)10-2-7(20)9(31-10)5-30-35(26,27)34-36(28,29)33-15-13(23)12(22)11(21)8(4-19)32-15/h3,7-13,15,19-23H,2,4-5H2,1H3,(H,26,27)(H,28,29)(H,17,24,25)" +"MNXM394","InChI=1S/C10H17N2O14P3/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(24-8)4-23-28(19,20)26-29(21,22)25-27(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,21,22)(H,11,14,15)(H2,16,17,18)" +"MNXM451","InChI=1S/C16H24N2O15P2/c1-6-4-18(16(24)17-14(6)23)10-3-8(19)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(20)7(2)30-15/h4,7-10,12-13,15,19,21-22H,3,5H2,1-2H3,(H,25,26)(H,27,28)(H,17,23,24)" +"MNXM2371","InChI=1S/C16H24N2O15P2/c1-6-4-18(16(24)17-14(6)23)10-3-8(19)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(20)7(2)30-15/h4,7-10,12-13,15,19,21-22H,3,5H2,1-2H3,(H,25,26)(H,27,28)(H,17,23,24)" +"MNXM899","InChI=1S/C16H26N2O15P2/c1-6-4-18(16(24)17-14(6)23)10-3-8(19)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(20)7(2)30-15/h4,7-13,15,19-22H,3,5H2,1-2H3,(H,25,26)(H,27,28)(H,17,23,24)" +"MNXM156","InChI=1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)" +"MNXM160","InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)" +"MNXM280","InChI=1S/C2H5O5P/c1-2(3)7-8(4,5)6/h1H3,(H2,4,5,6)" +"MNXM69","InChI=1S/C2H2O3/c3-1-2(4)5/h1H,(H,4,5)" +"MNXM58","InChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)" +"MNXM133","InChI=1S/C25H40N7O18P3S/c1-13(33)8-16(35)54-7-6-27-15(34)4-5-28-23(38)20(37)25(2,3)10-47-53(44,45)50-52(42,43)46-9-14-19(49-51(39,40)41)18(36)24(48-14)32-12-31-17-21(26)29-11-30-22(17)32/h11-12,14,18-20,24,36-37H,4-10H2,1-3H3,(H,27,34)(H,28,38)(H,42,43)(H,44,45)(H2,26,29,30)(H2,39,40,41)" +"MNXM287","InChI=1S/C10H14N5O10PS/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-26(18,19)25-27(20,21)22/h2-4,6-7,10,16-17H,1H2,(H,18,19)(H2,11,12,13)(H,20,21,22)" "MNXM49","InChI=1S/C10H15N5O13P2S/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(27-29(17,18)19)4(26-10)1-25-30(20,21)28-31(22,23)24/h2-4,6-7,10,16H,1H2,(H,20,21)(H2,11,12,13)(H2,17,18,19)(H,22,23,24)" +"MNXM508","InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)" +"MNXM57","InChI=1S/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)" "MNXM105630","InChI=1S/H2O3S/c1-4(2)3/h(H2,1,2,3)" +"MNXM89621","InChI=1S/C6H13O9P/c7-2-6(10)5(9)4(8)3(15-6)1-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)" +"MNXM179","InChI=1S/C3H6O3/c1-2(4)3(5)6/h2,4H,1H3,(H,5,6)" +"MNXM89588","InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)" +"MNXM238","InChI=1S/C5H8O3/c1-3(2)4(6)5(7)8/h3H,1-2H3,(H,7,8)" "MNXM45","InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(25-27(20,21)22)4(24-10)1-23-26(17,18)19/h2-4,6-7,10,16H,1H2,(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)" -"MNXM32","InChI=1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)" -"MNXM286","InChI=1S/C10H16N5O12P3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(25-7)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h3-7,16H,1-2H2,(H,20,21)(H,22,23)(H2,11,12,13)(H2,17,18,19)" -"MNXM90332","InChI=1S/C11H20NO11P/c1-4(10(15)16)22-9-7(12-5(2)13)11(17)23-6(8(9)14)3-21-24(18,19)20/h4,6-9,11,14,17H,3H2,1-2H3,(H,12,13)(H,15,16)(H2,18,19,20)" -"MNXM368","InChI=1S/C5H14NO6P/c6-1-2-11-13(9,10)12-4-5(8)3-7/h5,7-8H,1-4,6H2,(H,9,10)" -"MNXM90960","InChI=1S/Co/q+2" -"MNXM344","InChI=1S/C10H16N5O13P3/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(26-6)2-25-30(21,22)28-31(23,24)27-29(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H3,11,13,14,17)" -"MNXM546","InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)" -"MNXM58","InChI=1S/H2O4S/c1-5(2,3)4/h(H2,1,2,3,4)" -"MNXM89689","InChI=1S/C5H12N2O2/c6-3-1-2-4(7)5(8)9/h4H,1-3,6-7H2,(H,8,9)" -"MNXM1455","InChI=1S/C12H16NO9P/c14-9(11(16)10(15)6-22-23(19,20)21)5-13-8-4-2-1-3-7(8)12(17)18/h1-4,10-11,13,15-16H,5-6H2,(H,17,18)(H2,19,20,21)" -"MNXM761","InChI=1S/C4H5N3O/c5-3-1-2-6-4(8)7-3/h1-2H,(H3,5,6,7,8)" -"MNXM15900","InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)" -"MNXM242","InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2" -"MNXM216","InChI=1S/C6H6N2O/c7-6(9)5-2-1-3-8-4-5/h1-4H,(H2,7,9)" -"MNXM274","InChI=1S/C6H5NO2/c8-6(9)5-2-1-3-7-4-5/h1-4H,(H,8,9)" -"MNXM228","InChI=1S/NO/c1-2" -"MNXM579","InChI=1S/N2O/c1-2-3" -"MNXM95","InChI=1S/K/q+1" -"MNXM816","InChI=1S/C4H6O6/c5-1(3(7)8)2(6)4(9)10/h1-2,5-6H,(H,7,8)(H,9,10)" +"MNXM417","InChI=1S/C6H14O12P2/c7-4-3(1-16-19(10,11)12)18-6(9,5(4)8)2-17-20(13,14)15/h3-5,7-9H,1-2H2,(H2,10,11,12)(H2,13,14,15)" +"MNXM985","InChI=1S/C7H12O5/c1-4(2)7(12,6(10)11)3-5(8)9/h4,12H,3H2,1-2H3,(H,8,9)(H,10,11)" +"MNXM2","InChI=1S/H2O/h1H2" +"MNXM30","InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)" +"MNXM89582","InChI=1S/H2S/h1H2" +"MNXM9","InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)" +"MNXM39","InChI=1S/CH2O2/c2-1-3/h1H,(H,2,3)" +"MNXM74","InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h1,3,5H,2H2,(H2,6,7,8)" +"MNXM40","InChI=1S/C24H38N7O19P3S/c1-24(2,19(37)22(38)27-4-3-13(32)26-5-6-54-15(35)7-14(33)34)9-47-53(44,45)50-52(42,43)46-8-12-18(49-51(39,40)41)17(36)23(48-12)31-11-30-16-20(25)28-10-29-21(16)31/h10-12,17-19,23,36-37H,3-9H2,1-2H3,(H,26,32)(H,27,38)(H,33,34)(H,42,43)(H,44,45)(H2,25,28,29)(H2,39,40,41)" +"MNXM222","InChI=1S/C2H4O3/c3-1-2(4)5/h3H,1H2,(H,4,5)" +"MNXM349","InChI=1S/C2H4O2/c3-1-2-4/h1,4H,2H2" +"MNXM77","InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h4H,1-2H2,(H2,6,7,8)" +"MNXM475","InChI=1S/C3H4O4/c4-1-2(5)3(6)7/h1-2,5H,(H,6,7)" +"MNXM189","InChI=1S/C3H6O4/c4-1-2(5)3(6)7/h2,4-5H,1H2,(H,6,7)" +"MNXM261","InChI=1S/C3H8O10P2/c4-2(1-12-14(6,7)8)3(5)13-15(9,10)11/h2,4H,1H2,(H2,6,7,8)(H2,9,10,11)" +"MNXM1","InChI=1S/p+1" +"MNXM8","InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/p+1" +"MNXM622","InChI=1S/C5H11O7P/c1-3(6)5(8)4(7)2-12-13(9,10)11/h4-5,7-8H,2H2,1H3,(H2,9,10,11)" +"MNXM10","InChI=1S/C21H29N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1,3-4,7-8,10-11,13-16,20-21,29-32H,2,5-6H2,(H2,23,33)(H,34,35)(H,36,37)(H2,22,24,25)" +"MNXM63","InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)" +"MNXM650","InChI=1S/C24H38N7O17P3S/c1-4-15(33)52-8-7-26-14(32)5-6-27-22(36)19(35)24(2,3)10-45-51(42,43)48-50(40,41)44-9-13-18(47-49(37,38)39)17(34)23(46-13)31-12-30-16-20(25)28-11-29-21(16)31/h4,11-13,17-19,23,34-35H,1,5-10H2,2-3H3,(H,26,32)(H,27,36)(H,40,41)(H,42,43)(H2,25,28,29)(H2,37,38,39)" +"MNXM31","InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)" +"MNXM3","InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)" +"MNXM7","InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)" +"MNXM126","InChI=1S/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)" +"MNXM1263","InChI=1S/C24H40N7O18P3S/c1-24(2,19(36)22(37)27-5-3-14(33)26-6-8-53-15(34)4-7-32)10-46-52(43,44)49-51(41,42)45-9-13-18(48-50(38,39)40)17(35)23(47-13)31-12-30-16-20(25)28-11-29-21(16)31/h11-13,17-19,23,32,35-36H,3-10H2,1-2H3,(H,26,33)(H,27,37)(H,41,42)(H,43,44)(H2,25,28,29)(H2,38,39,40)" +"MNXM275","InChI=1S/C3H7O7P/c4-1-2(3(5)6)10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)" +"MNXM73","InChI=1S/C3H5O6P/c1-2(3(4)5)9-10(6,7)8/h1H2,(H,4,5)(H2,6,7,8)" +"MNXM11","InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)" +"MNXM26","InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)" +"MNXM1499","InChI=1S/C3H7O5P/c1-2-3(4)8-9(5,6)7/h2H2,1H3,(H2,5,6,7)" +"MNXM12","InChI=1S/C21H36N7O16P3S/c1-21(2,16(31)19(32)24-4-3-12(29)23-5-6-48)8-41-47(38,39)44-46(36,37)40-7-11-15(43-45(33,34)35)14(30)20(42-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-31,48H,3-8H2,1-2H3,(H,23,29)(H,24,32)(H,36,37)(H,38,39)(H2,22,25,26)(H2,33,34,35)" +"MNXM14","InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)" +"MNXM86","InChI=1S/C24H40N7O17P3S/c1-4-15(33)52-8-7-26-14(32)5-6-27-22(36)19(35)24(2,3)10-45-51(42,43)48-50(40,41)44-9-13-18(47-49(37,38)39)17(34)23(46-13)31-12-30-16-20(25)28-11-29-21(16)31/h11-13,17-19,23,34-35H,4-10H2,1-3H3,(H,26,32)(H,27,36)(H,40,41)(H,42,43)(H2,25,28,29)(H2,37,38,39)" +"MNXM21","InChI=1S/C23H38N7O17P3S/c1-12(31)51-7-6-25-14(32)4-5-26-21(35)18(34)23(2,3)9-44-50(41,42)47-49(39,40)43-8-13-17(46-48(36,37)38)16(33)22(45-13)30-11-29-15-19(24)27-10-28-20(15)30/h10-11,13,16-18,22,33-34H,4-9H2,1-3H3,(H,25,32)(H,26,35)(H,39,40)(H,41,42)(H2,24,27,28)(H2,36,37,38)" +"MNXM75","InChI=1S/C2H4O/c1-2-3/h2H,1H3" "MNXM46","InChI=1S/C4H4O5/c5-2(4(8)9)1-3(6)7/h1H2,(H,6,7)(H,8,9)" -"MNXM63488","InChI=1S/C37H59N7O20/c1-13(30(52)43-20(9-10-23(48)49)33(55)44-19(8-6-7-18(38)35(58)59)32(54)40-14(2)34(56)57)39-31(53)15(3)61-29-25(42-17(5)47)36-60-12-22(63-36)28(29)64-37-24(41-16(4)46)27(51)26(50)21(11-45)62-37/h13-15,18-22,24-29,36-37,45,50-51H,6-12,38H2,1-5H3,(H,39,53)(H,40,54)(H,41,46)(H,42,47)(H,43,52)(H,44,55)(H,48,49)(H,56,57)(H,58,59)" -"MNXM59271","InChI=1S/C18H31N5O9/c1-8(19)14(25)22-11(17(29)30)5-3-4-10(16(27)28)21-13(24)7-6-12(18(31)32)23-15(26)9(2)20/h8-12H,3-7,19-20H2,1-2H3,(H,21,24)(H,22,25)(H,23,26)(H,27,28)(H,29,30)(H,31,32)" +"MNXM90279","InChI=1S/C7H10O7/c1-3(5(10)11)7(14,6(12)13)2-4(8)9/h3,14H,2H2,1H3,(H,8,9)(H,10,11)(H,12,13)" +"MNXM131","InChI=1S/C6H8O7/c7-3(8)1-6(13,5(11)12)2-4(9)10/h13H,1-2H2,(H,7,8)(H,9,10)(H,11,12)" +"MNXM89661","InChI=1S/C6H8O7/c7-3(8)1-2(5(10)11)4(9)6(12)13/h2,4,9H,1H2,(H,7,8)(H,10,11)(H,12,13)" +"MNXM1694","InChI=1S/C7H10O7/c1-7(14,6(12)13)3(5(10)11)2-4(8)9/h3,14H,2H2,1H3,(H,8,9)(H,10,11)(H,12,13)" +"MNXM20","InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)" +"MNXM114079","InChI=1S/C5H8O4/c1-3(6)5(2,9)4(7)8/h9H,1-2H3,(H,7,8)" +"MNXM13","InChI=1S/CO2/c2-1-3" +"MNXM5","InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/p+1" +"MNXM6","InChI=1S/C21H30N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1,3-4,7-8,10-11,13-16,20-21,29-31H,2,5-6H2,(H2,23,32)(H,36,37)(H,38,39)(H2,22,24,25)(H2,33,34,35)" "MNXM60","InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)" -"MNXM40","InChI=1S/C24H38N7O19P3S/c1-24(2,19(37)22(38)27-4-3-13(32)26-5-6-54-15(35)7-14(33)34)9-47-53(44,45)50-52(42,43)46-8-12-18(49-51(39,40)41)17(36)23(48-12)31-11-30-16-20(25)28-10-29-21(16)31/h10-12,17-19,23,36-37H,3-9H2,1-2H3,(H,26,32)(H,27,38)(H,33,34)(H,42,43)(H,44,45)(H2,25,28,29)(H2,39,40,41)" -"MNXM584","InChI=1S/C4H8N4O4/c5-3(11)7-1(2(9)10)8-4(6)12/h1H,(H,9,10)(H3,5,7,11)(H3,6,8,12)" -"MNXM490","InChI=1S/C3H6N2O4/c4-3(9)5-1(6)2(7)8/h1,6H,(H,7,8)(H3,4,5,9)" +"MNXM1024","InChI=1S/C8H15NOS2/c9-8(10)4-2-1-3-7-5-6-11-12-7/h7H,1-6H2,(H2,9,10)" +"MNXM446","InChI=1S/C25H42N7O18P3S/c1-13(33)8-16(35)54-7-6-27-15(34)4-5-28-23(38)20(37)25(2,3)10-47-53(44,45)50-52(42,43)46-9-14-19(49-51(39,40)41)18(36)24(48-14)32-12-31-17-21(26)29-11-30-22(17)32/h11-14,18-20,24,33,36-37H,4-10H2,1-3H3,(H,27,34)(H,28,38)(H,42,43)(H,44,45)(H2,26,29,30)(H2,39,40,41)" +"MNXM3710","InChI=1S/C12H21NO4S2/c13-10(14)4-2-1-3-9(18)7-8-19-12(17)6-5-11(15)16/h9,18H,1-8H2,(H2,13,14)(H,15,16)" +"MNXM66","InChI=1S/C3H9O6P/c4-1-3(5)2-9-10(6,7)8/h3-5H,1-2H2,(H2,6,7,8)" +"MNXM1277","InChI=1S/C8H17NOS2/c9-8(10)4-2-1-3-7(12)5-6-11/h7,11-12H,1-6H2,(H2,9,10)" +"MNXM192","InChI=1S/C4H9NO2/c5-3-1-2-4(6)7/h1-3,5H2,(H,6,7)" +"MNXM422","InChI=1S/C4H9NO/c5-3-1-2-4-6/h4H,1-3,5H2" +"MNXM17312","InChI=1S/C35H69O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-34(36)41-31-33(32-42-44(38,39)40)43-35(37)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h33H,3-32H2,1-2H3,(H2,38,39,40)" +"MNXM1608","InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)" +"MNXM92","InChI=1S/C25H40N7O19P3S/c1-25(2,20(38)23(39)28-6-5-14(33)27-7-8-55-16(36)4-3-15(34)35)10-48-54(45,46)51-53(43,44)47-9-13-19(50-52(40,41)42)18(37)24(49-13)32-12-31-17-21(26)29-11-30-22(17)32/h11-13,18-20,24,37-38H,3-10H2,1-2H3,(H,27,33)(H,28,39)(H,34,35)(H,43,44)(H,45,46)(H2,26,29,30)(H2,40,41,42)" +"MNXM244","InChI=1S/C3H4O3/c4-2-1-3(5)6/h2H,1H2,(H,5,6)" +"MNXM232","InChI=1S/C49H74O4/c1-36(2)20-13-21-37(3)22-14-23-38(4)24-15-25-39(5)26-16-27-40(6)28-17-29-41(7)30-18-31-42(8)32-19-33-43(9)34-35-45-44(10)46(50)48(52-11)49(53-12)47(45)51/h20,22,24,26,28,30,32,34H,13-19,21,23,25,27,29,31,33,35H2,1-12H3" +"MNXM25","InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8)" +"MNXM32181","InChI=1S/C38H74NO10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-36(40)46-31-34(32-47-50(44,45)48-33-35(39)38(42)43)49-37(41)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h34-35H,3-33,39H2,1-2H3,(H,42,43)(H,44,45)" +"MNXM191","InChI=1S/C49H76O4/c1-36(2)20-13-21-37(3)22-14-23-38(4)24-15-25-39(5)26-16-27-40(6)28-17-29-41(7)30-18-31-42(8)32-19-33-43(9)34-35-45-44(10)46(50)48(52-11)49(53-12)47(45)51/h20,22,24,26,28,30,32,34,50-51H,13-19,21,23,25,27,29,31,33,35H2,1-12H3" +"MNXM93","InChI=1S/C4H4O4/c5-3(6)1-2-4(7)8/h1-2H,(H,5,6)(H,7,8)" +"MNXM4","InChI=1S/O2/c1-2" +"MNXM38","InChI=1S/C27H35N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,32,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H2,33,34,42,43)" +"MNXM53","InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)" +"MNXM32178","InChI=1S/C37H74NO8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-36(39)43-33-35(34-45-47(41,42)44-32-31-38)46-37(40)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h35H,3-34,38H2,1-2H3,(H,41,42)" +"MNXM33","InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H5,28,29,30,34,42,43,44,45,46,47)/p+1" +"MNXM223","InChI=1S/C51H74O2/c1-38(2)20-13-21-39(3)22-14-23-40(4)24-15-25-41(5)26-16-27-42(6)28-17-29-43(7)30-18-31-44(8)32-19-33-45(9)36-37-47-46(10)50(52)48-34-11-12-35-49(48)51(47)53/h11-12,20,22,24,26,28,30,32,34-36,52-53H,13-19,21,23,25,27,29,31,33,37H2,1-10H3" +"MNXM107","InChI=1S/HNO2/c2-1-3/h(H,2,3)/p-1" +"MNXM509","InChI=1S/C51H72O2/c1-38(2)20-13-21-39(3)22-14-23-40(4)24-15-25-41(5)26-16-27-42(6)28-17-29-43(7)30-18-31-44(8)32-19-33-45(9)36-37-47-46(10)50(52)48-34-11-12-35-49(48)51(47)53/h11-12,20,22,24,26,28,30,32,34-36H,13-19,21,23,25,27,29,31,33,37H2,1-10H3" +"MNXM218","InChI=1S/C2H7NO/c3-1-2-4/h4H,1-3H2" +"MNXM32180","InChI=1S/C38H76O13P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-37(40)47-33-36(34-50-53(45,46)49-32-35(39)31-48-52(42,43)44)51-38(41)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h35-36,39H,3-34H2,1-2H3,(H,45,46)(H2,42,43,44)" +"MNXM558","InChI=1S/C50H72O2/c1-38(2)19-12-20-39(3)21-13-22-40(4)23-14-24-41(5)25-15-26-42(6)27-16-28-43(7)29-17-30-44(8)31-18-32-45(9)35-36-46-37-49(51)47-33-10-11-34-48(47)50(46)52/h10-11,19,21,23,25,27,29,31,33-35,37,51-52H,12-18,20,22,24,26,28,30,32,36H2,1-9H3" +"MNXM207","InChI=1S/NO3/c2-1(3)4/q-1" +"MNXM2178","InChI=1S/C50H70O2/c1-38(2)19-12-20-39(3)21-13-22-40(4)23-14-24-41(5)25-15-26-42(6)27-16-28-43(7)29-17-30-44(8)31-18-32-45(9)35-36-46-37-49(51)47-33-10-11-34-48(47)50(46)52/h10-11,19,21,23,25,27,29,31,33-35,37H,12-18,20,22,24,26,28,30,32,36H2,1-9H3" +"MNXM32179","InChI=1S/C38H75O10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-37(41)45-33-36(34-47-49(43,44)46-32-35(40)31-39)48-38(42)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h35-36,39-40H,3-34H2,1-2H3,(H,43,44)" +"MNXM15","InChI=1S/H3N/h1H3" +"MNXM91","InChI=1S/C5H13O14P3/c6-3-2(1-16-20(8,9)10)17-5(4(3)7)18-22(14,15)19-21(11,12)13/h2-7H,1H2,(H,14,15)(H2,8,9,10)(H2,11,12,13)" +"MNXM90003","InChI=1S/C5H12NO7P/c6-5-4(8)3(7)2(13-5)1-12-14(9,10)11/h2-5,7-8H,1,6H2,(H2,9,10,11)" +"MNXM98","InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)" +"MNXM186","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)" +"MNXM463","InChI=1S/C7H15N2O8P/c8-1-4(10)9-7-6(12)5(11)3(17-7)2-16-18(13,14)15/h3,5-7,11-12H,1-2,8H2,(H,9,10)(H2,13,14,15)" +"MNXM29","InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)" +"MNXM453","InChI=1S/C8H15N2O9P/c11-3-9-1-5(12)10-8-7(14)6(13)4(19-8)2-18-20(15,16)17/h3-4,6-8,13-14H,1-2H2,(H,9,11)(H,10,12)(H2,15,16,17)" +"MNXM145","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)" +"MNXM15900","InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)" +"MNXM271","InChI=1S/C7H15O10P/c8-1-3(9)5(11)7(13)6(12)4(10)2-17-18(14,15)16/h4-8,10-13H,1-2H2,(H2,14,15,16)" +"MNXM258","InChI=1S/C4H9O7P/c5-1-3(6)4(7)2-11-12(8,9)10/h1,3-4,6-7H,2H2,(H2,8,9,10)" +"MNXM2179","InChI=1S/C5H11O7P/c6-2-1-4(7)5(8)3-12-13(9,10)11/h2,4-5,7-8H,1,3H2,(H2,9,10,11)" +"MNXM79","InChI=1S/C19H23N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,11-12,21,23H,5-8H2,(H,24,29)(H,27,28)(H,31,32)(H4,20,22,25,26,30)" +"MNXM237","InChI=1S/C20H23N7O7/c21-20-25-16-15(18(32)26-20)23-11(7-22-16)8-27(9-28)12-3-1-10(2-4-12)17(31)24-13(19(33)34)5-6-14(29)30/h1-4,9,11,13,23H,5-8H2,(H,24,31)(H,29,30)(H,33,34)(H4,21,22,25,26,32)" +"MNXM479745","InChI=1S/C8H16N3O8P/c9-5(1-10-3-12)11-8-7(14)6(13)4(19-8)2-18-20(15,16)17/h3-4,6-8,13-14H,1-2H2,(H2,9,11)(H,10,12)(H2,15,16,17)" +"MNXM162266","InChI=1S/C8H14N3O7P/c9-5-1-10-3-11(5)8-7(13)6(12)4(18-8)2-17-19(14,15)16/h1,3-4,6-8,12-13H,2,9H2,(H2,14,15,16)" +"MNXM507","InChI=1S/C9H14N3O9P/c10-7-4(9(15)16)11-2-12(7)8-6(14)5(13)3(21-8)1-20-22(17,18)19/h2-3,5-6,8,13-14H,1,10H2,(H,15,16)(H2,17,18,19)" +"MNXM789","InChI=1S/C5H11O7P/c6-2-4-3(7)1-5(11-4)12-13(8,9)10/h3-7H,1-2H2,(H2,8,9,10)" +"MNXM649","InChI=1S/C6H11O9P/c7-3(1-4(8)6(10)11)5(9)2-15-16(12,13)14/h3,5,7,9H,1-2H2,(H,10,11)(H2,12,13,14)" +"MNXM607","InChI=1S/C13H19N4O12P/c14-10-7(11(22)16-4(13(23)24)1-6(18)19)15-3-17(10)12-9(21)8(20)5(29-12)2-28-30(25,26)27/h3-5,8-9,12,20-21H,1-2,14H2,(H,16,22)(H,18,19)(H,23,24)(H2,25,26,27)" +"MNXM365","InChI=1S/C9H15N4O8P/c10-7-4(8(11)16)12-2-13(7)9-6(15)5(14)3(21-9)1-20-22(17,18)19/h2-3,5-6,9,14-15H,1,10H2,(H2,11,16)(H2,17,18,19)" +"MNXM465","InChI=1S/C5H8N2O5/c6-5(12)7-2(4(10)11)1-3(8)9/h2H,1H2,(H,8,9)(H,10,11)(H3,6,7,12)" +"MNXM456","InChI=1S/C10H15N4O9P/c11-8(18)5-9(13-3-15)14(2-12-5)10-7(17)6(16)4(23-10)1-22-24(19,20)21/h2-4,6-7,10,16-17H,1H2,(H2,11,18)(H,13,15)(H2,19,20,21)" +"MNXM138","InChI=1S/CH4NO5P/c2-1(3)7-8(4,5)6/h(H2,2,3)(H2,4,5,6)" +"MNXM125","InChI=1S/C10H13N4O8P/c15-6-4(1-21-23(18,19)20)22-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,11,12,17)(H2,18,19,20)" +"MNXM252","InChI=1S/C5H6N2O4/c8-3-1-2(4(9)10)6-5(11)7-3/h2H,1H2,(H,9,10)(H2,6,7,8,11)" +"MNXM235","InChI=1S/C5H4N2O4/c8-3-1-2(4(9)10)6-5(11)7-3/h1H,(H,9,10)(H2,6,7,8,11)" +"MNXM565","InChI=1S/C14H18N5O11P/c20-7(21)1-5(14(24)25)18-11-8-12(16-3-15-11)19(4-17-8)13-10(23)9(22)6(30-13)2-29-31(26,27)28/h3-6,9-10,13,22-23H,1-2H2,(H,20,21)(H,24,25)(H,15,16,18)(H2,26,27,28)" "MNXM519","InChI=1S/C10H13N2O11P/c13-5-1-3(9(16)17)12(10(18)11-5)8-7(15)6(14)4(23-8)2-22-24(19,20)21/h1,4,6-8,14-15H,2H2,(H,16,17)(H,11,13,18)(H2,19,20,21)" -"MNXM235","InChI=1S/C5H4N2O4/c8-3-1-2(4(9)10)6-5(11)7-3/h1H,(H,9,10)(H2,6,7,8,11)" -"MNXM75104","InChI=1S/C42H84O13P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-41(44)51-37-40(38-54-57(49,50)53-36-39(43)35-52-56(46,47)48)55-42(45)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h39-40,43H,3-38H2,1-2H3,(H,49,50)(H2,46,47,48)" -"MNXM75102","InChI=1S/C42H83O10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-41(45)49-37-40(38-51-53(47,48)50-36-39(44)35-43)52-42(46)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h39-40,43-44H,3-38H2,1-2H3,(H,47,48)" +"MNXM231","InChI=1S/C6H13NO2/c1-3-4(2)5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)" +"MNXM298","InChI=1S/C10H13N4O9P/c15-5-3(1-22-24(19,20)21)23-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H2,19,20,21)(H2,12,13,17,18)" +"MNXM80","InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)" +"MNXM113","InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)" +"MNXM439","InChI=1S/C6H10O3/c1-3-4(2)5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)" +"MNXM220","InChI=1S/C9H15N3O11P2/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18)" +"MNXM404","InChI=1S/C6H10O3/c1-4(2)3-5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)" +"MNXM411","InChI=1S/C9H15N3O10P2/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(21-8)4-20-24(18,19)22-23(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H2,10,11,14)(H2,15,16,17)" +"MNXM212","InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)" +"MNXM140","InChI=1S/C6H13NO2/c1-4(2)3-5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)" +"MNXM114097","InChI=1S/C5H10O4/c1-5(2,9)3(6)4(7)8/h3,6,9H,1-2H3,(H,7,8)" +"MNXM360","InChI=1S/C9H16N3O13P3/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(23-8)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H,20,21)(H2,10,11,14)(H2,15,16,17)" +"MNXM114220","InChI=1S/C6H10O4/c1-3-6(10,4(2)7)5(8)9/h10H,3H2,1-2H3,(H,8,9)" +"MNXM625","InChI=1S/C10H13N5O3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(17)6(2-16)18-7/h3-7,16-17H,1-2H2,(H2,11,12,13)" +"MNXM257","InChI=1S/C10H15N2O8P/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(20-8)4-19-21(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,11,14,15)(H2,16,17,18)" +"MNXM1202","InChI=1S/C6H12O4/c1-3-6(2,10)4(7)5(8)9/h4,7,10H,3H2,1-2H3,(H,8,9)" "MNXM152","InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)" -"MNXM257","InChI=1S/C10H15N2O8P/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(20-8)4-19-21(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,11,14,15)(H2,16,17,18)" -"MNXM73","InChI=1S/C3H5O6P/c1-2(3(4)5)9-10(6,7)8/h1H2,(H,4,5)(H2,6,7,8)" -"MNXM23","InChI=1S/C3H4O3/c1-2(4)3(5)6/h1H3,(H,5,6)" -"MNXM393","InChI=1S/C6H15O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h3-11H,1-2H2,(H2,12,13,14)" -"MNXM310","InChI=1S/C3H4O2/c1-3(5)2-4/h2H,1H3" -"MNXM909","InChI=1S/C3H6O2/c1-3(5)2-4/h2-3,5H,1H3" -"MNXM622","InChI=1S/C5H11O7P/c1-3(6)5(8)4(7)2-12-13(9,10)11/h4-5,7-8H,2H2,1H3,(H2,9,10,11)" -"MNXM138","InChI=1S/CH4NO5P/c2-1(3)7-8(4,5)6/h(H2,2,3)(H2,4,5,6)" -"MNXM1453","InChI=1S/C5H9NO3/c6-4(3-7)1-2-5(8)9/h3-4H,1-2,6H2,(H,8,9)" -"MNXM954","InChI=1S/C39H68N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-30(48)67-23-22-41-29(47)20-21-42-37(51)34(50)39(2,3)25-60-66(57,58)63-65(55,56)59-24-28-33(62-64(52,53)54)32(49)38(61-28)46-27-45-31-35(40)43-26-44-36(31)46/h18-19,26-28,32-34,38,49-50H,4-17,20-25H2,1-3H3,(H,41,47)(H,42,51)(H,55,56)(H,57,58)(H2,40,43,44)(H2,52,53,54)" +"MNXM1602","InChI=1S/C7H10O5/c1-3(2)4(6(9)10)5(8)7(11)12/h3-4H,1-2H3,(H,9,10)(H,11,12)" +"MNXM891","InChI=1S/C7H12O5/c1-3(2)4(6(9)10)5(8)7(11)12/h3-5,8H,1-2H3,(H,9,10)(H,11,12)" +"MNXM432","InChI=1S/C10H14N5O6P/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(21-7)2-20-22(17,18)19/h3-7,16H,1-2H2,(H2,11,12,13)(H2,17,18,19)" +"MNXM546","InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)" +"MNXM158","InChI=1S/C4H4N2O2/c7-3-1-2-5-4(8)6-3/h1-2H,(H2,5,6,7,8)" +"MNXM647","InChI=1S/C10H13N5O4/c11-10-13-8-7(9(18)14-10)12-3-15(8)6-1-4(17)5(2-16)19-6/h3-6,16-17H,1-2H2,(H3,11,13,14,18)" +"MNXM436","InChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)" +"MNXM495","InChI=1S/C10H14N4O11P2/c15-6-4(1-23-27(21,22)25-26(18,19)20)24-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,21,22)(H,11,12,17)(H2,18,19,20)" +"MNXM199","InChI=1S/C5H11NO2/c1-3(2)4(6)5(7)8/h3-4H,6H2,1-2H3,(H,7,8)" +"MNXM492","InChI=1S/C9H12N2O5/c12-4-6-5(13)3-8(16-6)11-2-1-7(14)10-9(11)15/h1-2,5-6,8,12-13H,3-4H2,(H,10,14,15)" +"MNXM423","InChI=1S/C10H15N4O14P3/c15-6-4(1-25-30(21,22)28-31(23,24)27-29(18,19)20)26-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,21,22)(H,23,24)(H,11,12,17)(H2,18,19,20)" +"MNXM807","InChI=1S/C7H7NO4/c9-6(10)4-2-1-3-5(8-4)7(11)12/h1-2,5H,3H2,(H,9,10)(H,11,12)" +"MNXM452","InChI=1S/C9H15N2O14P3/c12-5-3-8(11-2-1-7(13)10-9(11)14)23-6(5)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,20,21)(H,10,13,14)(H2,15,16,17)" +"MNXM213","InChI=1S/C5H4N4O/c10-5-3-4(7-1-6-3)8-2-9-5/h1-2H,(H2,6,7,8,9,10)" +"MNXM480","InChI=1S/C7H9NO4/c9-6(10)4-2-1-3-5(8-4)7(11)12/h4H,1-3H2,(H,9,10)(H,11,12)" +"MNXM572","InChI=1S/C9H14N2O11P2/c12-5-3-8(11-2-1-7(13)10-9(11)14)21-6(5)4-20-24(18,19)22-23(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,10,13,14)(H2,15,16,17)" +"MNXM1563","InChI=1S/C11H15NO8/c13-7(11(19)20)3-1-2-6(10(17)18)12-8(14)4-5-9(15)16/h6H,1-5H2,(H,12,14)(H,15,16)(H,17,18)(H,19,20)" +"MNXM174","InChI=1S/C5H4N4O2/c10-4-2-3(7-1-6-2)8-5(11)9-4/h1H,(H3,6,7,8,9,10,11)" +"MNXM234","InChI=1S/C9H13N2O8P/c12-5-3-8(11-2-1-7(13)10-9(11)14)19-6(5)4-18-20(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,10,13,14)(H2,15,16,17)" +"MNXM168","InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10)" +"MNXM1488","InChI=1S/C11H18N2O7/c12-6(10(17)18)2-1-3-7(11(19)20)13-8(14)4-5-9(15)16/h6-7H,1-5,12H2,(H,13,14)(H,15,16)(H,17,18)(H,19,20)" +"MNXM644","InChI=1S/C7H14N2O4/c8-4(6(10)11)2-1-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)" +"MNXM344","InChI=1S/C10H16N5O13P3/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(26-6)2-25-30(21,22)28-31(23,24)27-29(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H3,11,13,14,17)" +"MNXM529","InChI=1S/C7H14N2O4/c8-4(6(10)11)2-1-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)" +"MNXM78","InChI=1S/C6H14N2O2/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H,9,10)" +"MNXM761","InChI=1S/C4H5N3O/c5-3-1-2-6-4(8)7-3/h1-2H,(H3,5,6,7,8)" +"MNXM374","InChI=1S/C10H15N5O9P2/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(23-7)2-22-26(20,21)24-25(17,18)19/h3-7,16H,1-2H2,(H,20,21)(H2,11,12,13)(H2,17,18,19)" +"MNXM70","InChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)" "MNXM1756","InChI=1S/C10H18N4O5/c11-10(12)13-5-1-2-6(9(18)19)14-7(15)3-4-8(16)17/h6H,1-5H2,(H,14,15)(H,16,17)(H,18,19)(H4,11,12,13)" +"MNXM286","InChI=1S/C10H16N5O12P3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(25-7)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h3-7,16H,1-2H2,(H,20,21)(H,22,23)(H2,11,12,13)(H2,17,18,19)" +"MNXM478","InChI=1S/C7H10O6/c8-3-1-7(13,6(11)12)2-4(9)5(3)10/h3,5,8,10,13H,1-2H2,(H,11,12)" +"MNXM611","InChI=1S/C7H8O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1,5-6,9-10H,2H2,(H,11,12)" +"MNXM602","InChI=1S/C7H10O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1,4-6,8-10H,2H2,(H,11,12)" +"MNXM1617","InChI=1S/C5H7NO2/c7-5(8)4-2-1-3-6-4/h3-4H,1-2H2,(H,7,8)" +"MNXM114","InChI=1S/C5H9NO2/c7-5(8)4-2-1-3-6-4/h4,6H,1-3H2,(H,7,8)" +"MNXM1265","InChI=1S/C7H11O8P/c8-4-1-3(7(10)11)2-5(6(4)9)15-16(12,13)14/h2,4-6,8-9H,1H2,(H,10,11)(H2,12,13,14)" +"MNXM1365","InChI=1S/C10H13O10P/c1-4(9(12)13)19-6-2-5(10(14)15)3-7(8(6)11)20-21(16,17)18/h3,6-8,11H,1-2H2,(H,12,13)(H,14,15)(H2,16,17,18)" +"MNXM337","InChI=1S/C10H10O6/c1-5(9(12)13)16-8-4-6(10(14)15)2-3-7(8)11/h2-4,7-8,11H,1H2,(H,12,13)(H,14,15)" +"MNXM1489","InChI=1S/C12H16NO9P/c14-9-8(5-21-23(18,19)20)22-11(10(9)15)13-7-4-2-1-3-6(7)12(16)17/h1-4,8-11,13-15H,5H2,(H,16,17)(H2,18,19,20)" +"MNXM1455","InChI=1S/C12H16NO9P/c14-9(11(16)10(15)6-22-23(19,20)21)5-13-8-4-2-1-3-7(8)12(17)18/h1-4,10-11,13,15-16H,5-6H2,(H,17,18)(H2,19,20,21)" +"MNXM866","InChI=1S/C11H14NO6P/c13-10(6-18-19(15,16)17)11(14)8-5-12-9-4-2-1-3-7(8)9/h1-5,10-14H,6H2,(H2,15,16,17)" +"MNXM32","InChI=1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)" +"MNXM377","InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H" +"MNXM503","InChI=1S/C10H10O6/c11-6-1-3-10(4-2-6,9(15)16)5-7(12)8(13)14/h1-4,6,11H,5H2,(H,13,14)(H,15,16)" +"MNXM147","InChI=1S/C4H8N2O3/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H2,6,7)(H,8,9)" +"MNXM22","InChI=1S/H2O2/c1-2/h1-2H" +"MNXM1763","InChI=1S/C9H13NO6/c11-5-1-2-6(9(15)16)10-7(12)3-4-8(13)14/h5-6H,1-4H2,(H,10,12)(H,13,14)(H,15,16)" +"MNXM974","InChI=1S/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)" +"MNXM1757","InChI=1S/C9H13NO7/c11-6(2-4-8(14)15)10-5(9(16)17)1-3-7(12)13/h5H,1-4H2,(H,10,11)(H,12,13)(H,14,15)(H,16,17)" "MNXM1152","InChI=1S/C9H16N2O5/c10-5-1-2-6(9(15)16)11-7(12)3-4-8(13)14/h6H,1-5,10H2,(H,11,12)(H,13,14)(H,15,16)" -"MNXM37","InChI=1S/C5H10N2O3/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H2,7,8)(H,9,10)" -"MNXM356","InChI=1S/C3H6O2/c1-2-3(4)5/h2H2,1H3,(H,4,5)" -"MNXM757","InChI=1S/C27H46N7O18P3S/c1-4-5-15(35)10-18(37)56-9-8-29-17(36)6-7-30-25(40)22(39)27(2,3)12-49-55(46,47)52-54(44,45)48-11-16-21(51-53(41,42)43)20(38)26(50-16)34-14-33-19-23(28)31-13-32-24(19)34/h13-16,20-22,26,35,38-39H,4-12H2,1-3H3,(H,29,36)(H,30,40)(H,44,45)(H,46,47)(H2,28,31,32)(H2,41,42,43)" -"MNXM717","InChI=1S/C27H44N7O18P3S/c1-4-5-15(35)10-18(37)56-9-8-29-17(36)6-7-30-25(40)22(39)27(2,3)12-49-55(46,47)52-54(44,45)48-11-16-21(51-53(41,42)43)20(38)26(50-16)34-14-33-19-23(28)31-13-32-24(19)34/h13-14,16,20-22,26,38-39H,4-12H2,1-3H3,(H,29,36)(H,30,40)(H,44,45)(H,46,47)(H2,28,31,32)(H2,41,42,43)" -"MNXM39","InChI=1S/CH2O2/c2-1-3/h1H,(H,2,3)" -"MNXM195","InChI=1S/H2/h1H" -"MNXM179","InChI=1S/C3H6O3/c1-2(4)3(5)6/h2,4H,1H3,(H,5,6)" -"MNXM232","InChI=1S/C49H74O4/c1-36(2)20-13-21-37(3)22-14-23-38(4)24-15-25-39(5)26-16-27-40(6)28-17-29-41(7)30-18-31-42(8)32-19-33-43(9)34-35-45-44(10)46(50)48(52-11)49(53-12)47(45)51/h20,22,24,26,28,30,32,34H,13-19,21,23,25,27,29,31,33,35H2,1-12H3" -"MNXM191","InChI=1S/C49H76O4/c1-36(2)20-13-21-37(3)22-14-23-38(4)24-15-25-39(5)26-16-27-40(6)28-17-29-41(7)30-18-31-42(8)32-19-33-43(9)34-35-45-44(10)46(50)48(52-11)49(53-12)47(45)51/h20,22,24,26,28,30,32,34,50-51H,13-19,21,23,25,27,29,31,33,35H2,1-12H3" -"MNXM107505","InChI=1S/C7H8O2/c8-5-6-1-3-7(9)4-2-6/h1-4,8-9H,5H2" -"MNXM1675","InChI=1S/C6H13O8P/c1-3(7)5(9)6(10)4(8)2-14-15(11,12)13/h3,5-7,9-10H,2H2,1H3,(H2,11,12,13)" -"MNXM2387","InChI=1S/C3H6O2/c1-3(5)2-4/h2-3,5H,1H3" -"MNXM77","InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h4H,1-2H2,(H2,6,7,8)" -"MNXM142","InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)" -"MNXM2011","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" -"MNXM98","InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)" -"MNXM5663","InChI=1S/C24H42O21/c25-1-5-9(29)10(30)15(35)22(40-5)44-19-7(3-27)42-24(17(37)12(19)32)45-20-8(4-28)41-23(16(36)13(20)33)43-18-6(2-26)39-21(38)14(34)11(18)31/h5-38H,1-4H2" -"MNXM41","InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2" -"MNXM256","InChI=1S/C12H18N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H4-,13,14,15,17,18,19,20,21)/p+1" -"MNXM236","InChI=1S/C18H36O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h2-17H2,1H3,(H,19,20)" -"MNXM342","InChI=1S/C29H50N7O17P3S/c1-4-5-6-7-8-9-20(38)57-13-12-31-19(37)10-11-32-27(41)24(40)29(2,3)15-50-56(47,48)53-55(45,46)49-14-18-23(52-54(42,43)44)22(39)28(51-18)36-17-35-21-25(30)33-16-34-26(21)36/h16-18,22-24,28,39-40H,4-15H2,1-3H3,(H,31,37)(H,32,41)(H,45,46)(H,47,48)(H2,30,33,34)(H2,42,43,44)" -"MNXM554","InChI=1S/C10H14N2O4/c11-4-8-7(3-10(15)16)6(5-12-8)1-2-9(13)14/h5,12H,1-4,11H2,(H,13,14)(H,15,16)" -"MNXM547","InChI=1S/C40H46N4O17/c45-17-32-25(12-40(60)61)21(4-8-36(52)53)29(44-32)15-31-24(11-39(58)59)20(3-7-35(50)51)28(43-31)14-30-23(10-38(56)57)19(2-6-34(48)49)27(42-30)13-26-22(9-37(54)55)18(16-41-26)1-5-33(46)47/h16,41-45H,1-15,17H2,(H,46,47)(H,48,49)(H,50,51)(H,52,53)(H,54,55)(H,56,57)(H,58,59)(H,60,61)" +"MNXM1351","InChI=1S/C15H25N5O20P4/c16-12-7-13(18-4-19(12)14-10(23)8(21)5(37-14)1-35-41(25,26)27)20(3-17-7)15-11(24)9(22)6(38-15)2-36-43(31,32)40-44(33,34)39-42(28,29)30/h3-6,8-11,14-16,21-24H,1-2H2,(H,31,32)(H,33,34)(H2,25,26,27)(H2,28,29,30)" +"MNXM1515","InChI=1S/C15H23N5O14P2/c16-12-7-13(18-4-19(12)14-10(23)8(21)5(33-14)1-31-35(25,26)27)20(3-17-7)15-11(24)9(22)6(34-15)2-32-36(28,29)30/h3-6,8-11,14-16,21-24H,1-2H2,(H2,25,26,27)(H2,28,29,30)" "MNXM1177","InChI=1S/C4H8NO7P/c5-2(4(7)8)1-3(6)12-13(9,10)11/h2H,1,5H2,(H,7,8)(H2,9,10,11)" -"MNXM1949","InChI=1S/C2H4O5S/c3-2(4)1-8(5,6)7/h1H2,(H,3,4)(H,5,6,7)" -"MNXM89588","InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)" -"MNXM331","InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)" -"MNXM156","InChI=1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)" -"MNXM150642","InChI=1S/C24H49O9P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-24(28)33-23(19-26)21-32-34(29,30)31-20-22(27)18-25/h22-23,25-27H,2-21H2,1H3,(H,29,30)" -"MNXM4391","InChI=1S/C5H10O4/c1-3(7)5(9)4(8)2-6/h2-5,7-9H,1H3" -"MNXM76","InChI=1S/C9H11NO3/c10-8(9(12)13)5-6-1-3-7(11)4-2-6/h1-4,8,11H,5,10H2,(H,12,13)" -"MNXM34809","InChI=1S/C19H40NO7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-19(22)27-18(16-21)17-26-28(23,24)25-15-14-20/h18,21H,2-17,20H2,1H3,(H,23,24)" -"MNXM51","InChI=1S/C10H16N5O14P3/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(27-9)1-26-31(22,23)29-32(24,25)28-30(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H3,11,13,14,18)" -"MNXM1561","InChI=1S/C10H18N5O20P5/c11-10-13-7-4(8(17)14-10)12-2-15(7)9-5(16)6(32-39(26,27)33-36(18,19)20)3(31-9)1-30-38(24,25)35-40(28,29)34-37(21,22)23/h2-3,5-6,9,16H,1H2,(H,24,25)(H,26,27)(H,28,29)(H2,18,19,20)(H2,21,22,23)(H3,11,13,14,17)" -"MNXM1246","InChI=1S/C17H22N4O6/c1-7-3-9-10(4-8(7)2)21(5-11(23)14(25)12(24)6-22)15-13(18-9)16(26)20-17(27)19-15/h3-4,11-12,14,18,22-25H,5-6H2,1-2H3,(H2,19,20,26,27)" -"MNXM1464","InChI=1S/C22H36N4O13/c1-13(27)25(38)9-5-3-7-15(19(31)32)23-17(29)11-22(37,21(35)36)12-18(30)24-16(20(33)34)8-4-6-10-26(39)14(2)28/h15-16,37-39H,3-12H2,1-2H3,(H,23,29)(H,24,30)(H,31,32)(H,33,34)(H,35,36)" -"MNXM270","InChI=1S/C17H20N4O6/c1-7-3-9-10(4-8(7)2)21(5-11(23)14(25)12(24)6-22)15-13(18-9)16(26)20-17(27)19-15/h3-4,11-12,14,22-25H,5-6H2,1-2H3,(H,20,26,27)" -"MNXM234","InChI=1S/C9H13N2O8P/c12-5-3-8(11-2-1-7(13)10-9(11)14)19-6(5)4-18-20(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,10,13,14)(H2,15,16,17)" -"MNXM685","InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2" -"MNXM901","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)" -"MNXM55","InChI=1S/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)" -"MNXM440","InChI=1S/C6H10O6/c7-2-5(10)3(8)1-4(9)6(11)12/h3,5,7-8,10H,1-2H2,(H,11,12)" "MNXM1397","InChI=1S/C15H25N5O15P2/c16-12(25)7-13(17-3-18-14-10(23)8(21)5(34-14)1-32-36(26,27)28)20(4-19-7)15-11(24)9(22)6(35-15)2-33-37(29,30)31/h3-6,8-11,14-15,21-24H,1-2H2,(H2,16,25)(H,17,18)(H2,26,27,28)(H2,29,30,31)" "MNXM1408","InChI=1S/C15H25N5O15P2/c16-13(26)9-14(18-4-17-1-6(21)10(23)7(22)2-33-36(27,28)29)20(5-19-9)15-12(25)11(24)8(35-15)3-34-37(30,31)32/h4-5,7-8,10-12,15,22-25H,1-3H2,(H2,16,26)(H,17,18)(H2,27,28,29)(H2,30,31,32)" -"MNXM1333","InChI=1S/C63H105NO12P2/c1-47(2)24-14-25-48(3)26-15-27-49(4)28-16-29-50(5)30-17-31-51(6)32-18-33-52(7)34-19-35-53(8)36-20-37-54(9)38-21-39-55(10)40-22-41-56(11)42-23-43-57(12)44-45-73-77(69,70)76-78(71,72)75-63-60(64-58(13)66)62(68)61(67)59(46-65)74-63/h24,26,28,30,32,34,36,38,40,42,44,59-63,65,67-68H,14-23,25,27,29,31,33,35,37,39,41,43,45-46H2,1-13H3,(H,64,66)(H,69,70)(H,71,72)" -"MNXM17","InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)" -"MNXM2504","InChI=1S/C71H116N2O18P2/c1-48(2)25-15-26-49(3)27-16-28-50(4)29-17-30-51(5)31-18-32-52(6)33-19-34-53(7)35-20-36-54(8)37-21-38-55(9)39-22-40-56(10)41-23-42-57(11)43-24-44-58(12)45-46-86-92(82,83)91-93(84,85)90-71-63(73-60(14)76)65(78)67(61(47-74)87-71)88-70-62(72-59(13)75)64(77)66(79)68(89-70)69(80)81/h25,27,29,31,33,35,37,39,41,43,45,61-68,70-71,74,77-79H,15-24,26,28,30,32,34,36,38,40,42,44,46-47H2,1-14H3,(H,72,75)(H,73,76)(H,80,81)(H,82,83)(H,84,85)" -"MNXM370","InChI=1S/C6H14NO8P/c7-3-5(9)4(8)2(15-6(3)10)1-14-16(11,12)13/h2-6,8-10H,1,7H2,(H2,11,12,13)" -"MNXM61025","InChI=1S/C42H72O36/c43-1-9(51)17(53)31(10(52)2-44)73-38-26(62)20(56)33(12(4-46)68-38)75-40-28(64)22(58)35(14(6-48)70-40)77-42-30(66)24(60)36(16(8-50)72-42)78-41-29(65)23(59)34(15(7-49)71-41)76-39-27(63)21(57)32(13(5-47)69-39)74-37-25(61)19(55)18(54)11(3-45)67-37/h1,9-42,44-66H,2-8H2" -"MNXM598","InChI=1S/C6H15O8P/c7-1-5(9)3-13-15(11,12)14-4-6(10)2-8/h5-10H,1-4H2,(H,11,12)" -"MNXM145","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)" -"MNXM186","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)" -"MNXM314","InChI=1S/C14H28O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14(15)16/h2-13H2,1H3,(H,15,16)" -"MNXM214","InChI=1S/C25H40N7O17P3S/c1-4-5-16(34)53-9-8-27-15(33)6-7-28-23(37)20(36)25(2,3)11-46-52(43,44)49-51(41,42)45-10-14-19(48-50(38,39)40)18(35)24(47-14)32-13-31-17-21(26)29-12-30-22(17)32/h4-5,12-14,18-20,24,35-36H,6-11H2,1-3H3,(H,27,33)(H,28,37)(H,41,42)(H,43,44)(H2,26,29,30)(H2,38,39,40)" -"MNXM446","InChI=1S/C25H42N7O18P3S/c1-13(33)8-16(35)54-7-6-27-15(34)4-5-28-23(38)20(37)25(2,3)10-47-53(44,45)50-52(42,43)46-9-14-19(49-51(39,40)41)18(36)24(48-14)32-12-31-17-21(26)29-11-30-22(17)32/h11-14,18-20,24,33,36-37H,4-10H2,1-3H3,(H,27,34)(H,28,38)(H,42,43)(H,44,45)(H2,26,29,30)(H2,39,40,41)" -"MNXM397","InChI=1S/C9H16N5O13P3/c10-9-13-7-5(8(17)14-9)12-3(1-11-7)6(16)4(15)2-25-29(21,22)27-30(23,24)26-28(18,19)20/h4,6,15-16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H4,10,11,13,14,17)" -"MNXM51019","InChI=1S/C34H67O10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-33(37)41-29-32(30-43-45(39,40)42-28-31(36)27-35)44-34(38)26-24-22-20-18-16-14-12-10-8-6-4-2/h31-32,35-36H,3-30H2,1-2H3,(H,39,40)" -"MNXM6409","InChI=1S/C12H24N2O7/c13-7(12(20)21)3-1-2-4-14-5-8(16)10(18)11(19)9(17)6-15/h7,9-11,14-15,17-19H,1-6,13H2,(H,20,21)" -"MNXM160","InChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)" -"MNXM429","InChI=1S/C6H11O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-5,7-9H,1H2,(H2,11,12,13)" -"MNXM285","InChI=1S/C3H6O3/c1-2(4)3(5)6/h2,4H,1H3,(H,5,6)" -"MNXM306","InChI=1S/C18H34O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h9-10H,2-8,11-17H2,1H3,(H,19,20)" -"MNXM394","InChI=1S/C10H17N2O14P3/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(24-8)4-23-28(19,20)26-29(21,22)25-27(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,21,22)(H,11,14,15)(H2,16,17,18)" -"MNXM1376","InChI=1S/C16H26N2O16P2/c1-6-3-18(16(25)17-14(6)24)10-2-7(20)9(31-10)5-30-35(26,27)34-36(28,29)33-15-13(23)12(22)11(21)8(4-19)32-15/h3,7-13,15,19-23H,2,4-5H2,1H3,(H,26,27)(H,28,29)(H,17,24,25)" -"MNXM1847","InChI=1S/Ni" -"MNXM374","InChI=1S/C10H15N5O9P2/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(23-7)2-22-26(20,21)24-25(17,18)19/h3-7,16H,1-2H2,(H,20,21)(H2,11,12,13)(H2,17,18,19)" -"MNXM161","InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)" -"MNXM311","InChI=1S/C8H9NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,4,10,12H,3H2,1H3" -"MNXM1648","InChI=1S/C17H27N5O16P2/c18-14-7-15(20-3-19-14)22(4-21-7)16-11(28)8(25)6(35-16)2-34-39(30,31)38-40(32,33)37-17-12(29)9(26)10(27)13(36-17)5(24)1-23/h3-6,8-13,16-17,23-29H,1-2H2,(H,30,31)(H,32,33)(H2,18,19,20)" -"MNXM654","InChI=1S/C35H60N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-26(44)63-19-18-37-25(43)16-17-38-33(47)30(46)35(2,3)21-56-62(53,54)59-61(51,52)55-20-24-29(58-60(48,49)50)28(45)34(57-24)42-23-41-27-31(36)39-22-40-32(27)42/h14-15,22-24,28-30,34,45-46H,4-13,16-21H2,1-3H3,(H,37,43)(H,38,47)(H,51,52)(H,53,54)(H2,36,39,40)(H2,48,49,50)" -"MNXM456","InChI=1S/C10H15N4O9P/c11-8(18)5-9(13-3-15)14(2-12-5)10-7(17)6(16)4(23-10)1-22-24(19,20)21/h2-4,6-7,10,16-17H,1H2,(H2,11,18)(H,13,15)(H2,19,20,21)" -"MNXM25","InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8)" -"MNXM61","InChI=1S/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)" -"MNXM2124","InChI=1S/C3H5NO3/c4-2(1-5)3(6)7/h1-2H,4H2,(H,6,7)" -"MNXM694","InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)" -"MNXM486","InChI=1S/C31H54N7O17P3S/c1-4-5-6-7-8-9-10-11-22(40)59-15-14-33-21(39)12-13-34-29(43)26(42)31(2,3)17-52-58(49,50)55-57(47,48)51-16-20-25(54-56(44,45)46)24(41)30(53-20)38-19-37-23-27(32)35-18-36-28(23)38/h18-20,24-26,30,41-42H,4-17H2,1-3H3,(H,33,39)(H,34,43)(H,47,48)(H,49,50)(H2,32,35,36)(H2,44,45,46)" -"MNXM32178","InChI=1S/C37H74NO8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-36(39)43-33-35(34-45-47(41,42)44-32-31-38)46-37(40)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h35H,3-34,38H2,1-2H3,(H,41,42)" -"MNXM246","InChI=1S/C7H15NO3/c1-8(2,3)5-6(9)4-7(10)11/h6,9H,4-5H2,1-3H3/p+1" -"MNXM266","InChI=1S/C9H14N3O7P/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(19-8)4-18-20(15,16)17/h1-2,5-6,8,13H,3-4H2,(H2,10,11,14)(H2,15,16,17)" -"MNXM461","InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2" -"MNXM237","InChI=1S/C20H23N7O7/c21-20-25-16-15(18(32)26-20)23-11(7-22-16)8-27(9-28)12-3-1-10(2-4-12)17(31)24-13(19(33)34)5-6-14(29)30/h1-4,9,11,13,23H,5-8H2,(H,24,31)(H,29,30)(H,33,34)(H4,21,22,25,26,32)" -"MNXM79","InChI=1S/C19H23N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,11-12,21,23H,5-8H2,(H,24,29)(H,27,28)(H,31,32)(H4,20,22,25,26,30)" -"MNXM80","InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)" -"MNXM162245","InChI=1S/C16H30O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h7-8H,2-6,9-15H2,1H3,(H,17,18)" -"MNXM258","InChI=1S/C4H9O7P/c5-1-3(6)4(7)2-11-12(8,9)10/h1,3-4,6-7H,2H2,(H2,8,9,10)" -"MNXM271","InChI=1S/C7H15O10P/c8-1-3(9)5(11)7(13)6(12)4(10)2-17-18(14,15)16/h4-8,10-13H,1-2H2,(H2,14,15,16)" -"MNXM1636","InChI=1S/C9H12O4/c10-7-3-1-2-6(9(7)13)4-5-8(11)12/h1-3,7,9-10,13H,4-5H2,(H,11,12)" -"MNXM826","InChI=1S/C9H10O4/c10-7-3-1-2-6(9(7)13)4-5-8(11)12/h1-3,10,13H,4-5H2,(H,11,12)" -"MNXM1799","InChI=1S/C9H8O3/c10-8-3-1-2-7(6-8)4-5-9(11)12/h1-6,10H,(H,11,12)" -"MNXM131","InChI=1S/C6H8O7/c7-3(8)1-6(13,5(11)12)2-4(9)10/h13H,1-2H2,(H,7,8)(H,9,10)(H,11,12)" -"MNXM69","InChI=1S/C2H2O3/c3-1-2(4)5/h1H,(H,4,5)" -"MNXM1515","InChI=1S/C15H23N5O14P2/c16-12-7-13(18-4-19(12)14-10(23)8(21)5(33-14)1-31-35(25,26)27)20(3-17-7)15-11(24)9(22)6(34-15)2-32-36(28,29)30/h3-6,8-11,14-16,21-24H,1-2H2,(H2,25,26,27)(H2,28,29,30)" -"MNXM2246","InChI=1S/C5H11NO3S/c1-10(9)3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)" -"MNXM90941","InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h1,3-5,7-10H,2H2" -"MNXM325","InChI=1S/C6H13O10P/c7-2(1-16-17(13,14)15)3(8)4(9)5(10)6(11)12/h2-5,7-10H,1H2,(H,11,12)(H2,13,14,15)" -"MNXM649","InChI=1S/C6H11O9P/c7-3(1-4(8)6(10)11)5(9)2-15-16(12,13)14/h3,5,7,9H,1-2H2,(H,10,11)(H2,12,13,14)" -"MNXM558","InChI=1S/C50H72O2/c1-38(2)19-12-20-39(3)21-13-22-40(4)23-14-24-41(5)25-15-26-42(6)27-16-28-43(7)29-17-30-44(8)31-18-32-45(9)35-36-46-37-49(51)47-33-10-11-34-48(47)50(46)52/h10-11,19,21,23,25,27,29,31,33-35,37,51-52H,12-18,20,22,24,26,28,30,32,36H2,1-9H3" -"MNXM2178","InChI=1S/C50H70O2/c1-38(2)19-12-20-39(3)21-13-22-40(4)23-14-24-41(5)25-15-26-42(6)27-16-28-43(7)29-17-30-44(8)31-18-32-45(9)35-36-46-37-49(51)47-33-10-11-34-48(47)50(46)52/h10-11,19,21,23,25,27,29,31,33-35,37H,12-18,20,22,24,26,28,30,32,36H2,1-9H3" -"MNXM34810","InChI=1S/C21H44NO7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-21(24)29-20(18-23)19-28-30(25,26)27-17-16-22/h20,23H,2-19,22H2,1H3,(H,25,26)" -"MNXM108","InChI=1S/C16H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h2-15H2,1H3,(H,17,18)" -"MNXM222","InChI=1S/C2H4O3/c3-1-2(4)5/h3H,1H2,(H,4,5)" -"MNXM946","InChI=1S/C110H202N2O39P2/c1-7-13-19-25-31-37-38-44-50-56-62-68-92(123)142-82(66-60-54-48-42-35-29-23-17-11-5)72-94(125)146-104-96(112-90(121)71-81(65-59-53-47-41-34-28-22-16-10-4)141-91(122)67-61-55-49-43-36-30-24-18-12-6)105(144-88(102(104)150-152(133,134)135)78-140-109(107(129)130)74-86(98(127)101(148-109)85(119)76-114)147-110(108(131)132)73-83(117)97(126)100(149-110)84(118)75-113)139-77-87-99(128)103(145-93(124)70-80(116)64-58-52-46-40-33-27-21-15-9-3)95(106(143-87)151-153(136,137)138)111-89(120)69-79(115)63-57-51-45-39-32-26-20-14-8-2/h79-88,95-106,113-119,126-128H,7-78H2,1-6H3,(H,111,120)(H,112,121)(H,129,130)(H,131,132)(H2,133,134,135)(H2,136,137,138)" -"MNXM2680","InChI=1S/C117H214N2O45P2/c1-7-13-19-25-31-37-38-44-50-56-62-68-94(132)153-83(66-60-54-48-42-35-29-23-17-11-5)72-96(134)157-110-98(119-92(130)71-82(65-59-53-47-41-34-28-22-16-10-4)152-93(131)67-61-55-49-43-36-30-24-18-12-6)111(150-78-89-100(136)109(156-95(133)70-81(124)64-58-52-46-40-33-27-21-15-9-3)97(112(154-89)164-166(147,148)149)118-91(129)69-80(123)63-57-51-45-39-32-26-20-14-8-2)155-90(108(110)163-165(144,145)146)79-151-116(114(140)141)74-88(160-117(115(142)143)73-84(125)99(135)105(161-117)86(127)76-121)107(106(162-116)87(128)77-122)159-113-103(139)101(137)102(138)104(158-113)85(126)75-120/h80-90,97-113,120-128,135-139H,7-79H2,1-6H3,(H,118,129)(H,119,130)(H,140,141)(H,142,143)(H2,144,145,146)(H2,147,148,149)" -"MNXM174","InChI=1S/C5H4N4O2/c10-4-2-3(7-1-6-2)8-5(11)9-4/h1H,(H3,6,7,8,9,10,11)" -"MNXM481","InChI=1S/C21H35N7O13P2S/c1-21(2,16(32)19(33)24-4-3-12(29)23-5-6-44)8-39-43(36,37)41-42(34,35)38-7-11-14(30)15(31)20(40-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-32,44H,3-8H2,1-2H3,(H,23,29)(H,24,33)(H,34,35)(H,36,37)(H2,22,25,26)" -"MNXM196","InChI=1S/Fe/q+3" -"MNXM303","InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3" -"MNXM1505","InChI=1S/C14H20N2O16P2/c17-5-3-28-13(11(22)8(5)19)31-34(26,27)32-33(24,25)29-4-6-9(20)10(21)12(30-6)16-2-1-7(18)15-14(16)23/h1-2,6,8-13,19-22H,3-4H2,(H,24,25)(H,26,27)(H,15,18,23)" -"MNXM1786","InChI=1S/C14H23N3O15P2/c15-5-3-28-13(11(22)8(5)19)31-34(26,27)32-33(24,25)29-4-6-9(20)10(21)12(30-6)17-2-1-7(18)16-14(17)23/h1-2,5-6,8-13,19-22H,3-4,15H2,(H,24,25)(H,26,27)(H,16,18,23)" -"MNXM57","InChI=1S/C10H17N3O6S/c11-5(10(18)19)1-2-7(14)13-6(4-20)9(17)12-3-8(15)16/h5-6,20H,1-4,11H2,(H,12,17)(H,13,14)(H,15,16)(H,18,19)" -"MNXM151","InChI=1S/C20H32N6O12S2/c21-9(19(35)36)1-3-13(27)25-11(17(33)23-5-15(29)30)7-39-40-8-12(18(34)24-6-16(31)32)26-14(28)4-2-10(22)20(37)38/h9-12H,1-8,21-22H2,(H,23,33)(H,24,34)(H,25,27)(H,26,28)(H,29,30)(H,31,32)(H,35,36)(H,37,38)" -"MNXM509","InChI=1S/C51H72O2/c1-38(2)20-13-21-39(3)22-14-23-40(4)24-15-25-41(5)26-16-27-42(6)28-17-29-43(7)30-18-31-44(8)32-19-33-45(9)36-37-47-46(10)50(52)48-34-11-12-35-49(48)51(47)53/h11-12,20,22,24,26,28,30,32,34-36H,13-19,21,23,25,27,29,31,33,37H2,1-10H3" -"MNXM223","InChI=1S/C51H74O2/c1-38(2)20-13-21-39(3)22-14-23-40(4)24-15-25-41(5)26-16-27-42(6)28-17-29-43(7)30-18-31-44(8)32-19-33-45(9)36-37-47-46(10)50(52)48-34-11-12-35-49(48)51(47)53/h11-12,20,22,24,26,28,30,32,34-36,52-53H,13-19,21,23,25,27,29,31,33,37H2,1-10H3" -"MNXM2825","InChI=1S/C27H42N9O12/c1-16(37)34(46)10-4-7-19-25(43)30-14-23(41)28-13-22(40)29-15-24(42)31-20(8-5-11-35(47)17(2)38)26(44)33-21(27(45)32-19)9-6-12-36(48)18(3)39/h19-21H,4-15H2,1-3H3,(H,28,41)(H,29,40)(H,30,43)(H,31,42)(H,32,45)(H,33,44)/q-3" -"MNXM53290","InChI=1S/C26H43N9O12/c1-16(37)34(46)10-4-7-18-24(42)29-13-22(40)27-12-21(39)28-14-23(41)30-19(6-3-9-33(45)15-36)25(43)32-20(26(44)31-18)8-5-11-35(47)17(2)38/h15,18-20,45-47H,3-14H2,1-2H3,(H,27,40)(H,28,39)(H,29,42)(H,30,41)(H,31,44)(H,32,43)" -"MNXM1645","InChI=1S/C9H14N5O7P/c10-9-13-7-5(8(17)14-9)12-3(1-11-7)6(16)4(15)2-21-22(18,19)20/h4,6,15-16H,1-2H2,(H2,18,19,20)(H4,10,11,13,14,17)" -"MNXM2245","InChI=1S/C5H11NO3S/c1-10(9)3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)" -"MNXM63489","InChI=1S/C34H54N6O19/c1-13(29(49)39-18(8-9-23(45)46)31(51)40-19(33(54)55)7-5-6-17(35)32(52)53)36-30(50)14(2)57-27-20(37-15(3)43)12-56-22(11-42)28(27)59-34-24(38-16(4)44)26(48)25(47)21(10-41)58-34/h12-14,17-19,21-22,24-28,34,41-42,47-48H,5-11,35H2,1-4H3,(H,36,50)(H,37,43)(H,38,44)(H,39,49)(H,40,51)(H,45,46)(H,52,53)(H,54,55)" -"MNXM143","InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)" -"MNXM32389","InChI=1S/C26H43N5O14/c1-11(28-23(38)12(2)45-21-17(29-13(3)33)10-44-18(9-32)20(21)36)22(37)30-15(7-8-19(34)35)24(39)31-16(26(42)43)6-4-5-14(27)25(40)41/h11-12,14-18,20-21,32,36H,4-10,27H2,1-3H3,(H,28,38)(H,29,33)(H,30,37)(H,31,39)(H,34,35)(H,40,41)(H,42,43)" -"MNXM1219","InChI=1S/C7H13O10P/c8-3(1-4(9)7(12)13)6(11)5(10)2-17-18(14,15)16/h3,5-6,8,10-11H,1-2H2,(H,12,13)(H2,14,15,16)" -"MNXM140","InChI=1S/C6H13NO2/c1-4(2)3-5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)" -"MNXM507","InChI=1S/C9H14N3O9P/c10-7-4(9(15)16)11-2-12(7)8-6(14)5(13)3(21-8)1-20-22(17,18)19/h2-3,5-6,8,13-14H,1,10H2,(H,15,16)(H2,17,18,19)" -"MNXM607","InChI=1S/C13H19N4O12P/c14-10-7(11(22)16-4(13(23)24)1-6(18)19)15-3-17(10)12-9(21)8(20)5(29-12)2-28-30(25,26)27/h3-5,8-9,12,20-21H,1-2,14H2,(H,16,22)(H,18,19)(H,23,24)(H2,25,26,27)" -"MNXM70","InChI=1S/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)" -"MNXM1178","InChI=1S/C9H17N4O9P/c10-5-7(12-9(18)13-8(5)17)11-1-3(14)6(16)4(15)2-22-23(19,20)21/h3-4,6,14-16H,1-2,10H2,(H2,19,20,21)(H3,11,12,13,17,18)" -"MNXM791","InChI=1S/C9H16N4O6/c10-5-7(12-9(19)13-8(5)18)11-1-3(15)6(17)4(16)2-14/h3-4,6,14-17H,1-2,10H2,(H3,11,12,13,18,19)" -"MNXM2179","InChI=1S/C5H11O7P/c6-2-1-4(7)5(8)3-12-13(9,10)11/h2,4-5,7-8H,1,3H2,(H2,9,10,11)" -"MNXM4641","InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2" -"MNXM1189","InChI=1S/C10H17N5O17P4/c11-10-13-7-4(8(17)14-10)12-2-15(7)9-5(16)6(30-36(26,27)32-34(21,22)23)3(29-9)1-28-35(24,25)31-33(18,19)20/h2-3,5-6,9,16H,1H2,(H,24,25)(H,26,27)(H2,18,19,20)(H2,21,22,23)(H3,11,13,14,17)" -"MNXM113","InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)" -"MNXM338","InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)" -"MNXM1170","InChI=1S/C6H11O10P/c7-2(1-16-17(13,14)15)3(8)4(9)5(10)6(11)12/h2-3,5,7-8,10H,1H2,(H,11,12)(H2,13,14,15)" -"MNXM750","InChI=1S/C8H16O2/c1-2-3-4-5-6-7-8(9)10/h2-7H2,1H3,(H,9,10)" -"MNXM159","InChI=1S/C4H6O3/c1-2-3(5)4(6)7/h2H2,1H3,(H,6,7)" -"MNXM312","InChI=1S/C5H6O3/c1-2-3-4(6)5(7)8/h2H,1,3H2,(H,7,8)" -"MNXM1176","InChI=1S/C5H8O4/c1-3(6)2-4(7)5(8)9/h3,6H,2H2,1H3,(H,8,9)" -"MNXM93","InChI=1S/C4H4O4/c5-3(6)1-2-4(7)8/h1-2H,(H,5,6)(H,7,8)" -"MNXM183","InChI=1S/C20H23N7O6/c21-20-24-16-15(18(31)25-20)27-9-26(8-12(27)7-22-16)11-3-1-10(2-4-11)17(30)23-13(19(32)33)5-6-14(28)29/h1-4,12-13H,5-9H2,(H,23,30)(H,28,29)(H,32,33)(H4,21,22,24,25,31)" -"MNXM51279","InChI=1S/C39H77O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38(40)45-35-37(36-46-48(42,43)44)47-39(41)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h37H,3-36H2,1-2H3,(H2,42,43,44)" -"MNXM63","InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)" -"MNXM45856","InChI=1S/C48H89N3O15P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-43(52)61-37-40(64-44(53)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)38-62-67(57,58)66-68(59,60)63-39-41-45(54)46(55)47(65-41)51-36-35-42(49)50-48(51)56/h35-36,40-41,45-47,54-55H,3-34,37-39H2,1-2H3,(H,57,58)(H,59,60)(H2,49,50,56)" -"MNXM362","InChI=1S/C12H22O11/c13-1-3-5(15)6(16)9(19)12(22-3)23-10-4(2-14)21-11(20)8(18)7(10)17/h3-20H,1-2H2" -"MNXM465","InChI=1S/C5H8N2O5/c6-5(12)7-2(4(10)11)1-3(8)9/h2H,1H2,(H,8,9)(H,10,11)(H3,6,7,12)" -"MNXM252","InChI=1S/C5H6N2O4/c8-3-1-2(4(9)10)6-5(11)7-3/h2H,1H2,(H,9,10)(H2,6,7,8,11)" -"MNXM1446","InChI=1S/C35H55N7O26P2/c1-13(28(50)40-18(33(56)57)7-8-21(45)39-17(32(54)55)6-4-5-16(36)31(52)53)37-29(51)14(2)64-27-23(38-15(3)44)34(66-19(11-43)25(27)48)67-70(61,62)68-69(59,60)63-12-20-24(47)26(49)30(65-20)42-10-9-22(46)41-35(42)58/h9-10,13-14,16-20,23-27,30,34,43,47-49H,4-8,11-12,36H2,1-3H3,(H,37,51)(H,38,44)(H,39,45)(H,40,50)(H,52,53)(H,54,55)(H,56,57)(H,59,60)(H,61,62)(H,41,46,58)" -"MNXM51017","InChI=1S/C31H61O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-30(32)37-27-29(28-38-40(34,35)36)39-31(33)26-24-22-20-18-16-14-12-10-8-6-4-2/h29H,3-28H2,1-2H3,(H2,34,35,36)" -"MNXM281","InChI=1S/C19H21N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,12,21H,5-8H2,(H,24,29)(H,27,28)(H,31,32)(H4,20,22,25,26,30)" -"MNXM1062","InChI=1S/C7H11NO4/c1-5(10)8-6(7(11)12)3-2-4-9/h4,6H,2-3H2,1H3,(H,8,10)(H,11,12)" +"MNXM361","InChI=1S/C4H7NO3/c5-3(1-2-6)4(7)8/h2-3H,1,5H2,(H,7,8)" +"MNXM1422","InChI=1S/C6H11N2O6P/c9-5(2-14-15(11,12)13)6(10)4-1-7-3-8-4/h1,3,5-6,9-10H,2H2,(H,7,8)(H2,11,12,13)" +"MNXM353","InChI=1S/C4H9NO3/c5-3(1-2-6)4(7)8/h3,6H,1-2,5H2,(H,7,8)" +"MNXM1456","InChI=1S/C6H9N2O5P/c9-6(3-13-14(10,11)12)1-5-2-7-4-8-5/h2,4H,1,3H2,(H,7,8)(H2,10,11,12)" +"MNXM1334","InChI=1S/C4H10NO6P/c5-3(4(6)7)1-2-11-12(8,9)10/h3H,1-2,5H2,(H,6,7)(H2,8,9,10)" +"MNXM1482","InChI=1S/C6H12N3O4P/c7-5(3-13-14(10,11)12)1-6-2-8-4-9-6/h2,4-5H,1,3,7H2,(H,8,9)(H2,10,11,12)" +"MNXM142","InChI=1S/C4H9NO3/c1-2(6)3(5)4(7)8/h2-3,6H,5H2,1H3,(H,7,8)" +"MNXM1281","InChI=1S/C6H11N3O/c7-5(3-10)1-6-2-8-4-9-6/h2,4-5,10H,1,3,7H2,(H,8,9)" +"MNXM541","InChI=1S/C3H5O7P/c4-2(3(5)6)1-10-11(7,8)9/h1H2,(H,5,6)(H2,7,8,9)" +"MNXM1280","InChI=1S/C5H10NO7P/c6-3(5(8)9)1-2-4(7)13-14(10,11)12/h3H,1-2,6H2,(H,8,9)(H2,10,11,12)" "MNXM245","InChI=1S/C5H9NO3/c6-4(5(8)9)2-1-3-7/h3-4H,1-2,6H2,(H,8,9)" -"MNXM3630","InChI=1S/C8H14N2O5/c1-4(9)7(13)10-5(8(14)15)2-3-6(11)12/h4-5H,2-3,9H2,1H3,(H,10,13)(H,11,12)(H,14,15)" -"MNXM4026","InChI=1S/C8H14N2O5/c1-4(9)7(13)10-5(8(14)15)2-3-6(11)12/h4-5H,2-3,9H2,1H3,(H,10,13)(H,11,12)(H,14,15)" -"MNXM259","InChI=1S/C5H5N5O/c6-5-9-3-2(4(11)10-5)7-1-8-3/h1H,(H4,6,7,8,9,10,11)" -"MNXM341","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" -"MNXM448","InChI=1S/C12H23O14P/c13-1-3-5(14)7(16)9(18)11(24-3)26-12-10(19)8(17)6(15)4(25-12)2-23-27(20,21)22/h3-19H,1-2H2,(H2,20,21,22)" -"MNXM418","InChI=1S/C5H9NO4/c1-3(7)10-2-4(6)5(8)9/h4H,2,6H2,1H3,(H,8,9)" -"MNXM599","InChI=1S/C4H5NO4/c5-2(4(8)9)1-3(6)7/h5H,1H2,(H,6,7)(H,8,9)" -"MNXM114295","InChI=1S/C16H27N3O14P2/c1-6-4-19(16(24)18-14(6)23)10-3-8(20)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(17)7(2)30-15/h4,7-13,15,20-22H,3,5,17H2,1-2H3,(H,25,26)(H,27,28)(H,18,23,24)" -"MNXM3015","InChI=1S/C18H29N3O15P2/c1-7-5-21(18(27)20-16(7)26)12-4-10(23)11(34-12)6-32-37(28,29)36-38(30,31)35-17-15(25)14(24)13(8(2)33-17)19-9(3)22/h5,8,10-15,17,23-25H,4,6H2,1-3H3,(H,19,22)(H,28,29)(H,30,31)(H,20,26,27)" -"MNXM1202","InChI=1S/C6H12O4/c1-3-6(2,10)4(7)5(8)9/h4,7,10H,3H2,1-2H3,(H,8,9)" -"MNXM439","InChI=1S/C6H10O3/c1-3-4(2)5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)" -"MNXM1487","InChI=1S/C10H11NO6/c12-4-6(10(16)17)11-9(15)5-2-1-3-7(13)8(5)14/h1-3,6,12-14H,4H2,(H,11,15)(H,16,17)" -"MNXM19","InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)" -"MNXM89612","InChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2" -"MNXM404","InChI=1S/C6H10O3/c1-4(2)3-5(7)6(8)9/h4H,3H2,1-2H3,(H,8,9)" -"MNXM899","InChI=1S/C16H26N2O15P2/c1-6-4-18(16(24)17-14(6)23)10-3-8(19)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(20)7(2)30-15/h4,7-13,15,19-22H,3,5H2,1-2H3,(H,25,26)(H,27,28)(H,17,23,24)" -"MNXM90126","InChI=1S/C6H15O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h3-11H,1-2H2,(H2,12,13,14)" -"MNXM149","InChI=1S/Zn/q+2" -"MNXM1488","InChI=1S/C11H18N2O7/c12-6(10(17)18)2-1-3-7(11(19)20)13-8(14)4-5-9(15)16/h6-7H,1-5,12H2,(H,13,14)(H,15,16)(H,17,18)(H,19,20)" -"MNXM1563","InChI=1S/C11H15NO8/c13-7(11(19)20)3-1-2-6(10(17)18)12-8(14)4-5-9(15)16/h6H,1-5H2,(H,12,14)(H,15,16)(H,17,18)(H,19,20)" -"MNXM4","InChI=1S/O2/c1-2" -"MNXM220","InChI=1S/C9H15N3O11P2/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18)" -"MNXM1792","InChI=1S/C7H8O6/c1-3(6(10)11)4(7(12)13)2-5(8)9/h2H2,1H3,(H,8,9)(H,10,11)(H,12,13)" -"MNXM1694","InChI=1S/C7H10O7/c1-7(14,6(12)13)3(5(10)11)2-4(8)9/h3,14H,2H2,1H3,(H,8,9)(H,10,11)(H,12,13)" -"MNXM57404","InChI=1S/C145H262N2O74P4/c1-8-14-20-26-32-38-39-45-51-57-63-69-104(165)202-89(67-61-55-49-43-36-30-24-18-12-5)73-106(167)206-130-108(147-102(163)72-88(66-60-54-48-42-35-29-23-17-11-4)201-103(164)68-62-56-50-44-37-31-25-19-13-6)134(198-83-99-111(170)129(205-105(166)71-87(154)65-59-53-47-41-34-28-22-16-10-3)107(135(203-99)221-225(194,195)196)146-101(162)70-86(153)64-58-52-46-40-33-27-21-15-9-2)204-100(128(130)218-222(185,186)187)84-199-143(140(179)180)75-97(214-145(142(183)184)76-98(213-144(141(181)182)74-90(155)110(169)121(215-144)92(157)78-149)127(125(217-145)95(160)81-152)210-137-117(176)112(171)109(168)85(7)200-137)126(124(216-143)94(159)80-151)211-139-119(178)131(133(220-224(191,192)193)122(208-139)93(158)79-150)212-138-118(177)115(174)132(219-223(188,189)190)123(209-138)96(161)82-197-136-116(175)113(172)114(173)120(207-136)91(156)77-148/h85-100,107-139,148-161,168-178H,8-84H2,1-7H3,(H,146,162)(H,147,163)(H,179,180)(H,181,182)(H,183,184)(H2,185,186,187)(H2,188,189,190)(H2,191,192,193)(H2,194,195,196)" -"MNXM55194","InChI=1S/C151H272N2O79P4/c1-8-14-20-26-32-38-39-45-51-57-63-69-106(172)211-90(67-61-55-49-43-36-30-24-18-12-5)73-108(174)216-134-110(153-104(170)72-89(66-60-54-48-42-35-29-23-17-11-4)210-105(171)68-62-56-50-44-37-31-25-19-13-6)139(207-84-101-114(178)133(215-107(173)71-88(161)65-59-53-47-41-34-28-22-16-10-3)109(140(213-101)232-236(203,204)205)152-103(169)70-87(160)64-58-52-46-40-33-27-21-15-9-2)214-102(132(134)229-233(194,195)196)85-208-149(146(188)189)75-98(225-151(148(192)193)76-99(224-150(147(190)191)74-91(162)112(176)125(226-150)93(164)78-155)131(129(228-151)96(167)81-158)220-142-120(184)115(179)111(175)86(7)209-142)130(128(227-149)95(166)80-157)221-144-122(186)135(137(230-234(197,198)199)126(218-144)94(165)79-156)223-145-123(187)136(222-143-121(185)116(180)113(177)100(82-159)212-143)138(231-235(200,201)202)127(219-145)97(168)83-206-141-119(183)117(181)118(182)124(217-141)92(163)77-154/h86-102,109-145,154-168,175-187H,8-85H2,1-7H3,(H,152,169)(H,153,170)(H,188,189)(H,190,191)(H,192,193)(H2,194,195,196)(H2,197,198,199)(H2,200,201,202)(H2,203,204,205)" -"MNXM824","InChI=1S/C84H154N2O37P2/c1-5-9-13-17-21-25-29-33-37-41-55(89)45-65(96)85-69-77(117-67(98)47-57(91)43-39-35-31-27-23-19-15-11-7-3)73(102)63(115-80(69)123-125(110,111)112)53-113-79-70(86-66(97)46-56(90)42-38-34-30-26-22-18-14-10-6-2)78(118-68(99)48-58(92)44-40-36-32-28-24-20-16-12-8-4)76(122-124(107,108)109)64(116-79)54-114-83(81(103)104)50-62(72(101)75(120-83)61(95)52-88)119-84(82(105)106)49-59(93)71(100)74(121-84)60(94)51-87/h55-64,69-80,87-95,100-102H,5-54H2,1-4H3,(H,85,96)(H,86,97)(H,103,104)(H,105,106)(H2,107,108,109)(H2,110,111,112)" -"MNXM58983","InChI=1S/C100H184N2O38P2/c1-6-11-16-21-26-31-32-33-34-39-44-49-54-59-82(113)131-73(58-53-48-43-38-30-25-20-15-10-5)63-81(112)102-86-94(135-84(115)62-72(107)57-52-47-42-37-29-24-19-14-9-4)92(139-141(123,124)125)79(69-130-99(97(119)120)65-77(88(117)91(137-99)76(110)67-104)136-100(98(121)122)64-74(108)87(116)90(138-100)75(109)66-103)133-95(86)129-68-78-89(118)93(134-83(114)61-71(106)56-51-46-41-36-28-23-18-13-8-3)85(96(132-78)140-142(126,127)128)101-80(111)60-70(105)55-50-45-40-35-27-22-17-12-7-2/h70-79,85-96,103-110,116-118H,6-69H2,1-5H3,(H,101,111)(H,102,112)(H,119,120)(H,121,122)(H2,123,124,125)(H2,126,127,128)" -"MNXM854","InChI=1S/C6H8O7/c7-2(4(9)6(12)13)1-3(8)5(10)11/h2,4,7,9H,1H2,(H,10,11)(H,12,13)" -"MNXM475","InChI=1S/C3H4O4/c4-1-2(5)3(6)7/h1-2,5H,(H,6,7)" -"MNXM34739","InChI=1S/C20H41O9P/c1-2-3-4-5-6-7-8-9-10-11-12-13-20(24)29-19(15-22)17-28-30(25,26)27-16-18(23)14-21/h18-19,21-23H,2-17H2,1H3,(H,25,26)" -"MNXM87","InChI=1S/C15H22N2O18P2/c18-5-1-2-17(15(26)16-5)12-9(22)6(19)4(32-12)3-31-36(27,28)35-37(29,30)34-14-10(23)7(20)8(21)11(33-14)13(24)25/h1-2,4,6-12,14,19-23H,3H2,(H,24,25)(H,27,28)(H,29,30)(H,16,18,26)" -"MNXM75101","InChI=1S/C38H71O10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-37(41)45-33-36(34-47-49(43,44)46-32-35(40)31-39)48-38(42)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h13-16,35-36,39-40H,3-12,17-34H2,1-2H3,(H,43,44)" -"MNXM224","InChI=1S/C35H62N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-26(44)63-19-18-37-25(43)16-17-38-33(47)30(46)35(2,3)21-56-62(53,54)59-61(51,52)55-20-24-29(58-60(48,49)50)28(45)34(57-24)42-23-41-27-31(36)39-22-40-32(27)42/h22-24,28-30,34,45-46H,4-21H2,1-3H3,(H,37,43)(H,38,47)(H,51,52)(H,53,54)(H2,36,39,40)(H2,48,49,50)" -"MNXM165","InChI=1S/C12H22O11/c13-1-3-5(15)6(16)9(19)12(22-3)23-10-4(2-14)21-11(20)8(18)7(10)17/h3-20H,1-2H2" -"MNXM420","InChI=1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)" -"MNXM63556","InChI=1S/C8H16NO9P/c1-3(10)9-5-7(12)6(11)4(18-8(5)13)2-17-19(14,15)16/h4-8,11-13H,2H2,1H3,(H,9,10)(H2,14,15,16)" -"MNXM280","InChI=1S/C2H5O5P/c1-2(3)7-8(4,5)6/h1H3,(H2,4,5,6)" -"MNXM455","InChI=1S/C7H6O4/c8-5-3-1-2-4(6(5)9)7(10)11/h1-3,8-9H,(H,10,11)" -"MNXM1978","InChI=1S/C17H18N5O10P/c18-14-10-15(20-5-19-14)22(6-21-10)16-13(26)12(25)9(31-16)4-30-33(28,29)32-17(27)7-2-1-3-8(23)11(7)24/h1-3,5-6,9,12-13,16,23-26H,4H2,(H,28,29)(H2,18,19,20)" -"MNXM1485","InChI=1S/CH4O3S/c1-5(2,3)4/h1H3,(H,2,3,4)" -"MNXM208","InChI=1S/C17H23N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,18,22-24H,5-6H2,1-2H3,(H2,27,28,29)(H2,19,20,25,26)" -"MNXM119","InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)" -"MNXM56","InChI=1S/CH2O/c1-2/h1H2" -"MNXM422","InChI=1S/C4H9NO/c5-3-1-2-4-6/h4H,1-3,5H2" -"MNXM192","InChI=1S/C4H9NO2/c5-3-1-2-4(6)7/h1-3,5H2,(H,6,7)" -"MNXM288","InChI=1S/C9H12N2O6/c12-3-4-6(14)7(15)8(17-4)11-2-1-5(13)10-9(11)16/h1-2,4,6-8,12,14-15H,3H2,(H,10,13,16)" +"MNXM134","InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)" +"MNXM730","InChI=1S/C7H11NO5/c1-4(9)8-5(7(12)13)2-3-6(10)11/h5H,2-3H2,1H3,(H,8,9)(H,10,11)(H,12,13)" +"MNXM1384","InChI=1S/C7H12NO8P/c1-4(9)8-5(7(11)12)2-3-6(10)16-17(13,14)15/h5H,2-3H2,1H3,(H,8,9)(H,11,12)(H2,13,14,15)" +"MNXM1062","InChI=1S/C7H11NO4/c1-5(10)8-6(7(11)12)3-2-4-9/h4,6H,2-3H2,1H3,(H,8,10)(H,11,12)" +"MNXM817","InChI=1S/C7H14N2O3/c1-5(10)9-6(7(11)12)3-2-4-8/h6H,2-4,8H2,1H3,(H,9,10)(H,11,12)" +"MNXM159","InChI=1S/C4H6O3/c1-2-3(5)4(6)7/h2H2,1H3,(H,6,7)" +"MNXM89689","InChI=1S/C5H12N2O2/c6-3-1-2-4(7)5(8)9/h4H,1-3,6-7H2,(H,8,9)" +"MNXM211","InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)" +"MNXM722743","InChI=1S/C10H18N4O6/c11-5(8(17)18)2-1-3-13-10(12)14-6(9(19)20)4-7(15)16/h5-6H,1-4,11H2,(H,15,16)(H,17,18)(H,19,20)(H3,12,13,14)" +"MNXM694","InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)" +"MNXM123","InChI=1S/C4H9NO2S/c5-3(1-2-8)4(6)7/h3,8H,1-2,5H2,(H,6,7)" "MNXM318","InChI=1S/C20H25N7O6/c1-27-12(9-23-16-15(27)18(31)26-20(21)25-16)8-22-11-4-2-10(3-5-11)17(30)24-13(19(32)33)6-7-14(28)29/h2-5,12-13,22H,6-9H2,1H3,(H,24,30)(H,28,29)(H,32,33)(H4,21,23,25,26,31)" -"MNXM2646","InChI=1S/Cd" -"MNXM7343","InChI=1S/C2H6O3S/c1-2-6(3,4)5/h2H2,1H3,(H,3,4,5)" -"MNXM795","InChI=1S/C6H13O9P/c7-2-6(10)5(9)4(8)3(15-6)1-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)" -"MNXM1324","InChI=1S/C6H14O12P2/c7-4-3(1-16-19(10,11)12)18-6(9,5(4)8)2-17-20(13,14)15/h3-5,7-9H,1-2H2,(H2,10,11,12)(H2,13,14,15)" -"MNXM1660","InChI=1S/C6H10O7/c7-1-6(12)4(9)2(8)3(13-6)5(10)11/h2-4,7-9,12H,1H2,(H,10,11)" -"MNXM454","InChI=1S/C8H12NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2,10-11H,3-4H2,1H3,(H2,12,13,14)" -"MNXM419","InChI=1S/C8H11NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,10-12H,3-4H2,1H3" -"MNXM22","InChI=1S/H2O2/c1-2/h1-2H" -"MNXM414","InChI=1S/C40H44N4O16/c45-33(46)5-1-17-21(9-37(53)54)29-14-27-19(3-7-35(49)50)22(10-38(55)56)30(43-27)15-28-20(4-8-36(51)52)24(12-40(59)60)32(44-28)16-31-23(11-39(57)58)18(2-6-34(47)48)26(42-31)13-25(17)41-29/h41-44H,1-16H2,(H,45,46)(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)" -"MNXM1325","InChI=1S/C10H15N4O13P3/c15-5-1-7(14-4-13-8-9(14)11-3-12-10(8)16)25-6(5)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h3-7,15H,1-2H2,(H,20,21)(H,22,23)(H,11,12,16)(H2,17,18,19)" -"MNXM4511","InChI=1S/C40H69N3O15P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-35(44)53-29-32(56-36(45)26-24-22-20-18-16-14-12-10-8-6-4-2)30-54-59(49,50)58-60(51,52)55-31-33-37(46)38(47)39(57-33)43-28-27-34(41)42-40(43)48/h13-16,27-28,32-33,37-39,46-47H,3-12,17-26,29-31H2,1-2H3,(H,49,50)(H,51,52)(H2,41,42,48)" -"MNXM4508","InChI=1S/C44H77N3O15P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-39(48)57-33-36(60-40(49)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)34-58-63(53,54)62-64(55,56)59-35-37-41(50)42(51)43(61-37)47-32-31-38(45)46-44(47)52/h13-16,31-32,36-37,41-43,50-51H,3-12,17-30,33-35H2,1-2H3,(H,53,54)(H,55,56)(H2,45,46,52)" -"MNXM799","InChI=1S/C10H10O6/c1-5(9(12)13)16-7-4-2-3-6(8(7)11)10(14)15/h2-4,7-8,11H,1H2,(H,12,13)(H,14,15)" -"MNXM114261","InChI=1S/C7H8O4/c8-5-3-1-2-4(6(5)9)7(10)11/h1-3,5-6,8-9H,(H,10,11)" -"MNXM54163","InChI=1S/C157H282N2O84P4/c1-8-14-20-26-32-38-39-45-51-57-63-69-108(178)221-91(67-61-55-49-43-36-30-24-18-12-5)73-110(180)227-139-112(159-106(176)72-90(66-60-54-48-42-35-29-23-17-11-4)220-107(177)68-62-56-50-44-37-31-25-19-13-6)144(216-85-103-117(185)138(226-109(179)71-89(167)65-59-53-47-41-34-28-22-16-10-3)111(145(223-103)243-247(212,213)214)158-105(175)70-88(166)64-58-52-46-40-33-27-21-15-9-2)225-104(137(139)240-244(203,204)205)86-218-155(152(197)198)75-99(236-157(154(201)202)76-100(235-156(153(199)200)74-92(168)114(182)130(237-156)94(170)78-161)136(134(239-157)97(173)81-164)231-148-125(193)118(186)113(181)87(7)219-148)135(133(238-155)96(172)80-163)232-150-127(195)140(142(241-245(206,207)208)131(229-150)95(171)79-162)234-151-128(196)141(233-149-126(194)120(188)116(184)102(224-149)84-217-146-123(191)119(187)115(183)101(82-165)222-146)143(242-246(209,210)211)132(230-151)98(174)83-215-147-124(192)121(189)122(190)129(228-147)93(169)77-160/h87-104,111-151,160-174,181-196H,8-86H2,1-7H3,(H,158,175)(H,159,176)(H,197,198)(H,199,200)(H,201,202)(H2,203,204,205)(H2,206,207,208)(H2,209,210,211)(H2,212,213,214)" -"MNXM55192","InChI=1S/C163H292N2O89P4/c1-8-14-20-26-32-38-39-45-51-57-63-69-110(185)230-92(67-61-55-49-43-36-30-24-18-12-5)73-112(187)237-143-114(165-108(183)72-91(66-60-54-48-42-35-29-23-17-11-4)229-109(184)68-62-56-50-44-37-31-25-19-13-6)149(225-85-104-119(192)142(236-111(186)71-90(174)65-59-53-47-41-34-28-22-16-10-3)113(150(233-104)254-258(221,222)223)164-107(182)70-89(173)64-58-52-46-40-33-27-21-15-9-2)235-106(141(143)251-255(212,213)214)87-227-161(158(206)207)75-100(247-163(160(210)211)76-101(246-162(159(208)209)74-93(175)116(189)134(248-162)95(177)78-167)140(138(250-163)98(180)81-170)241-153-128(201)121(194)115(188)88(7)228-153)139(137(249-161)97(179)80-169)242-156-131(204)145(147(252-256(215,216)217)135(239-156)96(178)79-168)245-157-132(205)146(148(253-257(218,219)220)136(240-157)99(181)84-224-152-127(200)124(197)125(198)133(238-152)94(176)77-166)244-155-130(203)144(243-154-129(202)123(196)118(191)103(83-172)232-154)120(193)105(234-155)86-226-151-126(199)122(195)117(190)102(82-171)231-151/h88-106,113-157,166-181,188-205H,8-87H2,1-7H3,(H,164,182)(H,165,183)(H,206,207)(H,208,209)(H,210,211)(H2,212,213,214)(H2,215,216,217)(H2,218,219,220)(H2,221,222,223)" -"MNXM233","InChI=1S/C25H42N7O17P3S/c1-4-5-16(34)53-9-8-27-15(33)6-7-28-23(37)20(36)25(2,3)11-46-52(43,44)49-51(41,42)45-10-14-19(48-50(38,39)40)18(35)24(47-14)32-13-31-17-21(26)29-12-30-22(17)32/h12-14,18-20,24,35-36H,4-11H2,1-3H3,(H,27,33)(H,28,37)(H,41,42)(H,43,44)(H2,26,29,30)(H2,38,39,40)" -"MNXM602","InChI=1S/C7H10O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1,4-6,8-10H,2H2,(H,11,12)" -"MNXM1265","InChI=1S/C7H11O8P/c8-4-1-3(7(10)11)2-5(6(4)9)15-16(12,13)14/h2,4-6,8-9H,1H2,(H,10,11)(H2,12,13,14)" -"MNXM17312","InChI=1S/C35H69O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-34(36)41-31-33(32-42-44(38,39)40)43-35(37)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h33H,3-32H2,1-2H3,(H2,38,39,40)" -"MNXM126","InChI=1S/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)" -"MNXM275","InChI=1S/C3H7O7P/c4-1-2(3(5)6)10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9)" -"MNXM133","InChI=1S/C25H40N7O18P3S/c1-13(33)8-16(35)54-7-6-27-15(34)4-5-28-23(38)20(37)25(2,3)10-47-53(44,45)50-52(42,43)46-9-14-19(49-51(39,40)41)18(36)24(48-14)32-12-31-17-21(26)29-11-30-22(17)32/h11-12,14,18-20,24,36-37H,4-10H2,1-3H3,(H,27,34)(H,28,38)(H,42,43)(H,44,45)(H2,26,29,30)(H2,39,40,41)" -"MNXM114191","InChI=1S/C35H53N6O13/c1-23(11-17-42)20-30(45)39(51)14-5-8-27-33(48)38-28(34(49)37-27)9-6-15-40(52)32(47)22-25(3)13-19-54-35(50)29(36-26(4)44)10-7-16-41(53)31(46)21-24(2)12-18-43/h20-22,27-29,42-43H,5-19H2,1-4H3,(H,36,44)(H,37,49)(H,38,48)/q-3" -"MNXM295","InChI=1S/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)" -"MNXM212","InChI=1S/C10H13N5O4/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(18)6(17)4(1-16)19-10/h2-4,6-7,10,16-18H,1H2,(H2,11,12,13)" -"MNXM272","InChI=1S/C39H70N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-30(48)67-23-22-41-29(47)20-21-42-37(51)34(50)39(2,3)25-60-66(57,58)63-65(55,56)59-24-28-33(62-64(52,53)54)32(49)38(61-28)46-27-45-31-35(40)43-26-44-36(31)46/h26-28,32-34,38,49-50H,4-25H2,1-3H3,(H,41,47)(H,42,51)(H,55,56)(H,57,58)(H2,40,43,44)(H2,52,53,54)" -"MNXM1626","InChI=1S/C5H13O7P/c1-5(8,3-6)4(7)2-12-13(9,10)11/h4,6-8H,2-3H2,1H3,(H2,9,10,11)" -"MNXM332","InChI=1S/H5O10P3/c1-11(2,3)9-13(7,8)10-12(4,5)6/h(H,7,8)(H2,1,2,3)(H2,4,5,6)" -"MNXM659","InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3" -"MNXM194","InChI=1S/C11H14NO9P/c13-8-7(5-20-22(17,18)19)21-10(9(8)14)12-3-1-2-6(4-12)11(15)16/h1-4,7-10,13-14H,5H2,(H2-,15,16,17,18,19)/p+1" +"MNXM117","InChI=1S/CH4N2O/c2-1(3)4/h(H4,2,3,4)" +"MNXM61","InChI=1S/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)" +"MNXM16","InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/p+1" "MNXM144","InChI=1S/C3H7NO2/c4-2-1-3(5)6/h1-2,4H2,(H,5,6)" -"MNXM593","InChI=1S/C6H12O4/c1-6(2,3-7)4(8)5(9)10/h4,7-8H,3H2,1-2H3,(H,9,10)" -"MNXM410","InChI=1S/C36H44N4O8/c1-17-21(5-9-33(41)42)29-14-27-19(3)22(6-10-34(43)44)30(39-27)15-28-20(4)24(8-12-36(47)48)32(40-28)16-31-23(7-11-35(45)46)18(2)26(38-31)13-25(17)37-29/h37-40H,5-16H2,1-4H3,(H,41,42)(H,43,44)(H,45,46)(H,47,48)" -"MNXM366","InChI=1S/C8H13N2O5P/c1-5-8(11)7(2-9)6(3-10-5)4-15-16(12,13)14/h3,11H,2,4,9H2,1H3,(H2,12,13,14)" -"MNXM674","InChI=1S/C31H54N7O18P3S/c1-4-5-6-7-8-9-19(39)14-22(41)60-13-12-33-21(40)10-11-34-29(44)26(43)31(2,3)16-53-59(50,51)56-58(48,49)52-15-20-25(55-57(45,46)47)24(42)30(54-20)38-18-37-23-27(32)35-17-36-28(23)38/h17-20,24-26,30,39,42-43H,4-16H2,1-3H3,(H,33,40)(H,34,44)(H,48,49)(H,50,51)(H2,32,35,36)(H2,45,46,47)" -"MNXM677","InChI=1S/C31H52N7O18P3S/c1-4-5-6-7-8-9-19(39)14-22(41)60-13-12-33-21(40)10-11-34-29(44)26(43)31(2,3)16-53-59(50,51)56-58(48,49)52-15-20-25(55-57(45,46)47)24(42)30(54-20)38-18-37-23-27(32)35-17-36-28(23)38/h17-18,20,24-26,30,42-43H,4-16H2,1-3H3,(H,33,40)(H,34,44)(H,48,49)(H,50,51)(H2,32,35,36)(H2,45,46,47)" -"MNXM328","InChI=1S/C5H14N4/c6-3-1-2-4-9-5(7)8/h1-4,6H2,(H4,7,8,9)" -"MNXM117","InChI=1S/CH4N2O/c2-1(3)4/h(H4,2,3,4)" -"MNXM4509","InChI=1S/C48H85N3O15P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-43(52)61-37-40(64-44(53)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)38-62-67(57,58)66-68(59,60)63-39-41-45(54)46(55)47(65-41)51-36-35-42(49)50-48(51)56/h13-16,35-36,40-41,45-47,54-55H,3-12,17-34,37-39H2,1-2H3,(H,57,58)(H,59,60)(H2,49,50,56)" -"MNXM121","InChI=1S/C9H15N2O15P3/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H,10,12,15)(H2,16,17,18)" -"MNXM644","InChI=1S/C7H14N2O4/c8-4(6(10)11)2-1-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)" -"MNXM97117","InChI=1S/C6H14NO8P/c7-5(6(10)11)3-15-16(12,13)14-2-4(9)1-8/h4-5,8-9H,1-3,7H2,(H,10,11)(H,12,13)" -"MNXM78","InChI=1S/C6H14N2O2/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H,9,10)" -"MNXM319","InChI=1S/C7H14N2O4S/c8-4(6(10)11)1-2-14-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)" -"MNXM92","InChI=1S/C25H40N7O19P3S/c1-25(2,20(38)23(39)28-6-5-14(33)27-7-8-55-16(36)4-3-15(34)35)10-48-54(45,46)51-53(43,44)47-9-13-19(50-52(40,41)42)18(37)24(49-13)32-12-31-17-21(26)29-11-30-22(17)32/h11-13,18-20,24,37-38H,3-10H2,1-2H3,(H,27,33)(H,28,39)(H,34,35)(H,43,44)(H,45,46)(H2,26,29,30)(H2,40,41,42)" -"MNXM89955","InChI=1S/C25H40N7O19P3S/c1-12(23(37)38)24(39)55-7-6-27-14(33)4-5-28-21(36)18(35)25(2,3)9-48-54(45,46)51-53(43,44)47-8-13-17(50-52(40,41)42)16(34)22(49-13)32-11-31-15-19(26)29-10-30-20(15)32/h10-13,16-18,22,34-35H,4-9H2,1-3H3,(H,27,33)(H,28,36)(H,37,38)(H,43,44)(H,45,46)(H2,26,29,30)(H2,40,41,42)" -"MNXM86","InChI=1S/C24H40N7O17P3S/c1-4-15(33)52-8-7-26-14(32)5-6-27-22(36)19(35)24(2,3)10-45-51(42,43)48-50(40,41)44-9-13-18(47-49(37,38)39)17(34)23(46-13)31-12-30-16-20(25)28-11-29-21(16)31/h11-13,17-19,23,34-35H,4-10H2,1-3H3,(H,26,32)(H,27,36)(H,40,41)(H,42,43)(H2,25,28,29)(H2,37,38,39)" -"MNXM813","InChI=1S/C6H6O6/c7-4(8)1-3(6(11)12)2-5(9)10/h1H,2H2,(H,7,8)(H,9,10)(H,11,12)" -"MNXM935","InChI=1S/C10H12N4O4/c15-2-6-5(16)1-7(18-6)14-4-13-8-9(14)11-3-12-10(8)17/h3-7,15-16H,1-2H2,(H,11,12,17)" -"MNXM114","InChI=1S/C5H9NO2/c7-5(8)4-2-1-3-6-4/h4,6H,1-3H2,(H,7,8)" -"MNXM132","InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h3H,4H2,1-2H3,(H,9,10)(H2,6,7,8)" -"MNXM83","InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)" -"MNXM1130","InChI=1S/C9H8O4/c10-7-3-1-2-6(9(7)13)4-5-8(11)12/h1-5,10,13H,(H,11,12)" -"MNXM2040","InChI=1S/C9H8O6/c10-6(4-5-8(12)13)2-1-3-7(11)9(14)15/h1-5,11H,(H,12,13)(H,14,15)" -"MNXM34811","InChI=1S/C23H48NO7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-23(26)31-22(20-25)21-30-32(27,28)29-19-18-24/h22,25H,2-21,24H2,1H3,(H,27,28)" -"MNXM1026","InChI=1S/Mo" -"MNXM128","InChI=1S/Ca/q+2" -"MNXM134","InChI=1S/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)" -"MNXM1635","InChI=1S/C46H70O2/c1-10-36(2)19-11-20-37(3)21-12-22-38(4)23-13-24-39(5)25-14-26-40(6)27-15-28-41(7)29-16-30-42(8)31-17-32-43(9)35-44-33-18-34-45(47)46(44)48/h10,18,20,22,24,26,28,30,32-34,47-48H,11-17,19,21,23,25,27,29,31,35H2,1-9H3" -"MNXM2255","InChI=1S/Mn/q+2" -"MNXM231","InChI=1S/C6H13NO2/c1-3-4(2)5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)" -"MNXM249","InChI=1S/C34H34N4O4/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25/h7-8,13-16,35-36H,1-2,9-12H2,3-6H3,(H,39,40)(H,41,42)" -"MNXM43","InChI=1S/ClH/h1H/p-1" -"MNXM5043","InChI=1S/C55H92O7P2/c1-45(2)23-13-24-46(3)25-14-26-47(4)27-15-28-48(5)29-16-30-49(6)31-17-32-50(7)33-18-34-51(8)35-19-36-52(9)37-20-38-53(10)39-21-40-54(11)41-22-42-55(12)43-44-61-64(59,60)62-63(56,57)58/h23,25,27,29,31,33,35,37,39,41,43H,13-22,24,26,28,30,32,34,36,38,40,42,44H2,1-12H3,(H,59,60)(H2,56,57,58)" -"MNXM632","InChI=1S/Cu/q+2" -"MNXM653","InChI=1S/Mg/q+2" -"MNXM82173","InChI=1S/C42H46N4O16/c1-41(17-39(59)60)23(5-9-35(51)52)29-14-27-21(11-37(55)56)19(3-7-33(47)48)25(43-27)13-26-20(4-8-34(49)50)22(12-38(57)58)28(44-26)15-31-42(2,18-40(61)62)24(6-10-36(53)54)30(46-31)16-32(41)45-29/h13-16,23-24,43-44H,3-12,17-18H2,1-2H3,(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)(H,61,62)" +"MNXM19","InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)" +"MNXM699","InChI=1S/C6H11NO4/c1-4(8)11-3-2-5(7)6(9)10/h5H,2-3,7H2,1H3,(H,9,10)" +"MNXM55","InChI=1S/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)" +"MNXM153","InChI=1S/C9H8O4/c10-7-3-1-6(2-4-7)5-8(11)9(12)13/h1-4,10H,5H2,(H,12,13)" +"MNXM76","InChI=1S/C9H11NO3/c10-8(9(12)13)5-6-1-3-7(11)4-2-6/h1-4,8,11H,5,10H2,(H,12,13)" "MNXM97","InChI=1S/C9H11NO2/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5,8H,6,10H2,(H,11,12)" -"MNXM207","InChI=1S/NO3/c2-1(3)4/q-1" -"MNXM107","InChI=1S/HNO2/c2-1-3/h(H,2,3)/p-1" -"MNXM100","InChI=1S/C10H20O7P2/c1-9(2)5-4-6-10(3)7-8-16-19(14,15)17-18(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)" -"MNXM34","InChI=1S/C15H28O7P2/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-21-24(19,20)22-23(16,17)18/h7,9,11H,5-6,8,10,12H2,1-4H3,(H,19,20)(H2,16,17,18)" -"MNXM213","InChI=1S/C5H4N4O/c10-5-3-4(7-1-6-3)8-2-9-5/h1-2H,(H2,6,7,8,9,10)" -"MNXM2689","InChI=1S/C6H9O9P/c7-2(1-14-16(11,12)13)5-3(8)4(9)6(10)15-5/h2,5,7-9H,1H2,(H2,11,12,13)" -"MNXM189","InChI=1S/C3H6O4/c4-1-2(5)3(6)7/h2,4-5H,1H2,(H,6,7)" -"MNXM322","InChI=1S/C12H17N4OS/c1-8-11(3-4-17)18-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7,17H,3-4,6H2,1-2H3,(H2,13,14,15)/q+1" -"MNXM58984","InChI=1S/C139H252N2O70P4/c1-7-13-19-25-31-37-38-44-50-56-62-68-102(159)193-87(66-60-54-48-42-35-29-23-17-11-5)72-104(161)197-125-106(141-100(157)71-86(65-59-53-47-41-34-28-22-16-10-4)192-101(158)67-61-55-49-43-36-30-24-18-12-6)129(190-82-97-109(164)124(196-103(160)70-85(148)64-58-52-46-40-33-27-21-15-9-3)105(130(194-97)211-215(186,187)188)140-99(156)69-84(147)63-57-51-45-39-32-26-20-14-8-2)195-98(123(125)208-212(177,178)179)83-191-137(134(171)172)75-96(204-139(136(175)176)74-95(108(163)118(206-139)91(152)78-144)203-138(135(173)174)73-88(149)107(162)117(205-138)90(151)77-143)122(121(207-137)93(154)80-146)201-133-115(170)126(128(210-214(183,184)185)119(199-133)92(153)79-145)202-132-114(169)112(167)127(209-213(180,181)182)120(200-132)94(155)81-189-131-113(168)110(165)111(166)116(198-131)89(150)76-142/h84-98,105-133,142-155,162-170H,7-83H2,1-6H3,(H,140,156)(H,141,157)(H,171,172)(H,173,174)(H,175,176)(H2,177,178,179)(H2,180,181,182)(H2,183,184,185)(H2,186,187,188)" -"MNXM959","InChI=1S/C6H10O4/c1-6(2,3-7)4(8)5(9)10/h7H,3H2,1-2H3,(H,9,10)" -"MNXM88","InChI=1S/C37H66N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-28(46)65-21-20-39-27(45)18-19-40-35(49)32(48)37(2,3)23-58-64(55,56)61-63(53,54)57-22-26-31(60-62(50,51)52)30(47)36(59-26)44-25-43-29-33(38)41-24-42-34(29)44/h24-26,30-32,36,47-48H,4-23H2,1-3H3,(H,39,45)(H,40,49)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)" -"MNXM581","InChI=1S/C37H64N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-28(46)65-21-20-39-27(45)18-19-40-35(49)32(48)37(2,3)23-58-64(55,56)61-63(53,54)57-22-26-31(60-62(50,51)52)30(47)36(59-26)44-25-43-29-33(38)41-24-42-34(29)44/h16-17,24-26,30-32,36,47-48H,4-15,18-23H2,1-3H3,(H,39,45)(H,40,49)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)" -"MNXM89582","InChI=1S/H2S/h1H2" -"MNXM1253","InChI=1S/C13H21N3O8S/c1-6(17)13(24)25-5-8(11(21)15-4-10(19)20)16-9(18)3-2-7(14)12(22)23/h6-8,17H,2-5,14H2,1H3,(H,15,21)(H,16,18)(H,19,20)(H,22,23)" -"MNXM365","InChI=1S/C9H15N4O8P/c10-7-4(8(11)16)12-2-13(7)9-6(15)5(14)3(21-9)1-20-22(17,18)19/h2-3,5-6,9,14-15H,1,10H2,(H2,11,16)(H2,17,18,19)" -"MNXM969","InChI=1S/C6H14NO8P/c7-3-5(10)4(9)2(1-8)14-6(3)15-16(11,12)13/h2-6,8-10H,1,7H2,(H2,11,12,13)" -"MNXM340","InChI=1S/C8H16NO9P/c1-3(11)9-5-7(13)6(12)4(2-10)17-8(5)18-19(14,15)16/h4-8,10,12-13H,2H2,1H3,(H,9,11)(H2,14,15,16)" -"MNXM511","InChI=1S/C20H21N7O6/c21-20-24-16-15(18(31)25-20)27-9-26(8-12(27)7-22-16)11-3-1-10(2-4-11)17(30)23-13(19(32)33)5-6-14(28)29/h1-4,9,12-13H,5-8H2,(H6-,21,22,23,24,25,28,29,30,31,32,33)/p+1" -"MNXM1051","InChI=1S/C11H19N3O7S/c12-6(11(20)21)1-2-8(16)14-7(4-22-5-15)10(19)13-3-9(17)18/h6-7,15H,1-5,12H2,(H,13,19)(H,14,16)(H,17,18)(H,20,21)" -"MNXM952","InChI=1S/C11H17N3O7S/c12-6(11(20)21)1-2-8(16)14-7(4-22-5-15)10(19)13-3-9(17)18/h5-7H,1-4,12H2,(H,13,19)(H,14,16)(H,17,18)(H,20,21)" -"MNXM401","InChI=1S/C10H13N5O5/c11-10-13-7-4(8(19)14-10)12-2-15(7)9-6(18)5(17)3(1-16)20-9/h2-3,5-6,9,16-18H,1H2,(H3,11,13,14,19)" -"MNXM606","InChI=1S/C5H12O8P2/c1-5(4-6)2-3-12-15(10,11)13-14(7,8)9/h2,6H,3-4H2,1H3,(H,10,11)(H2,7,8,9)" -"MNXM2212","InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2" -"MNXM452","InChI=1S/C9H15N2O14P3/c12-5-3-8(11-2-1-7(13)10-9(11)14)23-6(5)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,20,21)(H,10,13,14)(H2,15,16,17)" -"MNXM7138","InChI=1S/C4H10O3S/c1-2-3-4-8(5,6)7/h2-4H2,1H3,(H,5,6,7)/CRV:8.6" -"MNXM363","InChI=1S/C33H58N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-24(42)61-17-16-35-23(41)14-15-36-31(45)28(44)33(2,3)19-54-60(51,52)57-59(49,50)53-18-22-27(56-58(46,47)48)26(43)32(55-22)40-21-39-25-29(34)37-20-38-30(25)40/h20-22,26-28,32,43-44H,4-19H2,1-3H3,(H,35,41)(H,36,45)(H,49,50)(H,51,52)(H2,34,37,38)(H2,46,47,48)" -"MNXM642","InChI=1S/C33H56N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-24(42)61-17-16-35-23(41)14-15-36-31(45)28(44)33(2,3)19-54-60(51,52)57-59(49,50)53-18-22-27(56-58(46,47)48)26(43)32(55-22)40-21-39-25-29(34)37-20-38-30(25)40/h12-13,20-22,26-28,32,43-44H,4-11,14-19H2,1-3H3,(H,35,41)(H,36,45)(H,49,50)(H,51,52)(H2,34,37,38)(H2,46,47,48)" -"MNXM282","InChI=1S/C2H7NO3S/c3-1-2-7(4,5)6/h1-3H2,(H,4,5,6)" -"MNXM4708","InChI=1S/C8H16NO9P/c1-4(11)9-5(2-10)7(13)8(14)6(12)3-18-19(15,16)17/h2,5-8,12-14H,3H2,1H3,(H,9,11)(H2,15,16,17)" -"MNXM1860","InChI=1S/C10H15N4O15P3/c15-5-3(1-26-31(22,23)29-32(24,25)28-30(19,20)21)27-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H,22,23)(H,24,25)(H2,19,20,21)(H2,12,13,17,18)" -"MNXM361","InChI=1S/C4H7NO3/c5-3(1-2-6)4(7)8/h2-3H,1,5H2,(H,7,8)" -"MNXM353","InChI=1S/C4H9NO3/c5-3(1-2-6)4(7)8/h3,6H,1-2,5H2,(H,7,8)" -"MNXM351","InChI=1S/C34H40N4O4/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25/h7-8,35-38H,1-2,9-16H2,3-6H3,(H,39,40)(H,41,42)" -"MNXM346","InChI=1S/C34H34N4O4/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25/h7-8,13-16,35,38H,1-2,9-12H2,3-6H3,(H,39,40)(H,41,42)" -"MNXM441","InChI=1S/C5H4N4O3/c10-3-1-2(7-4(11)6-1)8-5(12)9-3/h(H4,6,7,8,9,10,11,12)" -"MNXM612","InChI=1S/C4H6N4O3/c5-3(10)6-1-2(9)8-4(11)7-1/h1H,(H3,5,6,10)(H2,7,8,9,11)" -"MNXM647","InChI=1S/C10H13N5O4/c11-10-13-8-7(9(18)14-10)12-3-15(8)6-1-4(17)5(2-16)19-6/h3-6,16-17H,1-2H2,(H3,11,13,14,18)" -"MNXM173","InChI=1S/C7H15NO3/c1-8(2,3)5-6(9)4-7(10)11/h6,9H,4-5H2,1-3H3/p+1" -"MNXM572","InChI=1S/C9H14N2O11P2/c12-5-3-8(11-2-1-7(13)10-9(11)14)21-6(5)4-20-24(18,19)22-23(15,16)17/h1-2,5-6,8,12H,3-4H2,(H,18,19)(H,10,13,14)(H2,15,16,17)" -"MNXM114097","InChI=1S/C5H10O4/c1-5(2,9)3(6)4(7)8/h3,6,9H,1-2H3,(H,7,8)" -"MNXM392","InChI=1S/C3H4O4/c4-1-2(5)3(6)7/h4H,1H2,(H,6,7)" -"MNXM1422","InChI=1S/C6H11N2O6P/c9-5(2-14-15(11,12)13)6(10)4-1-7-3-8-4/h1,3,5-6,9-10H,2H2,(H,7,8)(H2,11,12,13)" -"MNXM1748","InChI=1S/C6H12O5/c1-3(8)5(10)6(11)4(9)2-7/h3,5-8,10-11H,2H2,1H3" -"MNXM1749","InChI=1S/C6H13O8P/c1-3(7)5(9)6(10)4(8)2-14-15(11,12)13/h3,5-7,9-10H,2H2,1H3,(H2,11,12,13)" -"MNXM555","InChI=1S/C7H5NO4/c9-6(10)4-2-1-3-8-5(4)7(11)12/h1-3H,(H,9,10)(H,11,12)" -"MNXM355","InChI=1S/C11H15N2O8P/c12-10(16)6-2-1-3-13(4-6)11-9(15)8(14)7(21-11)5-20-22(17,18)19/h1-4,7-9,11,14-15H,5H2,(H3-,12,16,17,18,19)/p+1" -"MNXM1434","InChI=1S/C12H22O11/c13-1-3-5(14)8(17)10(19)12(23-3)21-2-4-6(15)7(16)9(18)11(20)22-4/h3-20H,1-2H2" -"MNXM1160","InChI=1S/C7H11N5O8P2/c8-7-11-5-4(6(13)12-7)10-3(1-9-5)2-19-22(17,18)20-21(14,15)16/h1-2H2,(H,17,18)(H2,14,15,16)(H4,8,9,11,12,13)" -"MNXM421","InChI=1S/C7H7NO2/c8-6-3-1-5(2-4-6)7(9)10/h1-4H,8H2,(H,9,10)" -"MNXM503","InChI=1S/C10H10O6/c11-6-1-3-10(4-2-6,9(15)16)5-7(12)8(13)14/h1-4,6,11H,5H2,(H,13,14)(H,15,16)" -"MNXM153","InChI=1S/C9H8O4/c10-7-3-1-6(2-4-7)5-8(11)9(12)13/h1-4,10H,5H2,(H,12,13)" -"MNXM1365","InChI=1S/C10H13O10P/c1-4(9(12)13)19-6-2-5(10(14)15)3-7(8(6)11)20-21(16,17)18/h3,6-8,11H,1-2H2,(H,12,13)(H,14,15)(H2,16,17,18)" -"MNXM722743","InChI=1S/C10H18N4O6/c11-5(8(17)18)2-1-3-13-10(12)14-6(9(19)20)4-7(15)16/h5-6H,1-4,11H2,(H,15,16)(H,17,18)(H,19,20)(H3,12,13,14)" -"MNXM48596","InChI=1S/C15H23N5O14P2/c16-12-7-13(18-3-17-12)20(4-19-7)14-10(23)8(21)5(32-14)1-30-35(26,27)34-36(28,29)31-2-6-9(22)11(24)15(25)33-6/h3-6,8-11,14-15,21-25H,1-2H2,(H,26,27)(H,28,29)(H2,16,17,18)" -"MNXM298","InChI=1S/C10H13N4O9P/c15-5-3(1-22-24(19,20)21)23-9(6(5)16)14-2-11-4-7(14)12-10(18)13-8(4)17/h2-3,5-6,9,15-16H,1H2,(H2,19,20,21)(H2,12,13,17,18)" -"MNXM1088","InChI=1S/C3H4N2O4/c4-3(9)5-1(6)2(7)8/h(H,7,8)(H3,4,5,6,9)" -"MNXM891","InChI=1S/C7H12O5/c1-3(2)4(6(9)10)5(8)7(11)12/h3-5,8H,1-2H3,(H,9,10)(H,11,12)" -"MNXM1602","InChI=1S/C7H10O5/c1-3(2)4(6(9)10)5(8)7(11)12/h3-4H,1-2H3,(H,9,10)(H,11,12)" -"MNXM1634","InChI=1S/C9H10O3/c10-8-3-1-2-7(6-8)4-5-9(11)12/h1-3,6,10H,4-5H2,(H,11,12)" -"MNXM1667","InChI=1S/C6H15O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h3-11H,1-2H2,(H2,12,13,14)" -"MNXM162266","InChI=1S/C8H14N3O7P/c9-5-1-10-3-11(5)8-7(13)6(12)4(18-8)2-17-19(14,15)16/h1,3-4,6-8,12-13H,2,9H2,(H2,14,15,16)" -"MNXM3329","InChI=1S/C2H3NO3/c3-1(4)2(5)6/h(H2,3,4)(H,5,6)" -"MNXM1617","InChI=1S/C5H7NO2/c7-5(8)4-2-1-3-6-4/h3-4H,1-2H2,(H,7,8)" +"MNXM418","InChI=1S/C5H9NO4/c1-3(7)10-2-4(6)5(8)9/h4H,2,6H2,1H3,(H,8,9)" +"MNXM162242","InChI=1S/C9H8O3/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5H,6H2,(H,11,12)" +"MNXM2562","InChI=1S/C4H9NO2Se/c5-3(1-2-8)4(6)7/h3,8H,1-2,5H2,(H,6,7)" +"MNXM323","InChI=1S/H2O3S2/c1-5(2,3)4/h(H2,1,2,3,4)" +"MNXM727","InChI=1S/C3H7NO2Se/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)" +"MNXM92652","InChI=1S/H2Se/h1H2/p-1" +"MNXM94","InChI=1S/C11H12N2O2/c12-9(11(14)15)5-7-6-13-10-4-2-1-3-8(7)10/h1-4,6,9,13H,5,12H2,(H,14,15)" +"MNXM119","InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)" +"MNXM331","InChI=1S/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)" +"MNXM669","InChI=1S/C6H12N2O3/c1-3(7)5(9)8-4(2)6(10)11/h3-4H,7H2,1-2H3,(H,8,9)(H,10,11)" "MNXM683","InChI=1S/C5H10N2O3S/c6-3(2-11)5(10)7-1-4(8)9/h3,11H,1-2,6H2,(H,7,10)(H,8,9)" -"MNXM114220","InChI=1S/C6H10O4/c1-3-6(10,4(2)7)5(8)9/h10H,3H2,1-2H3,(H,8,9)" -"MNXM243","InChI=1S/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)" -"MNXM784","InChI=1S/C29H48N7O17P3S/c1-4-5-6-7-8-9-20(38)57-13-12-31-19(37)10-11-32-27(41)24(40)29(2,3)15-50-56(47,48)53-55(45,46)49-14-18-23(52-54(42,43)44)22(39)28(51-18)36-17-35-21-25(30)33-16-34-26(21)36/h8-9,16-18,22-24,28,39-40H,4-7,10-15H2,1-3H3,(H,31,37)(H,32,41)(H,45,46)(H,47,48)(H2,30,33,34)(H2,42,43,44)" -"MNXM766","InChI=1S/C29H50N7O18P3S/c1-4-5-6-7-17(37)12-20(39)58-11-10-31-19(38)8-9-32-27(42)24(41)29(2,3)14-51-57(48,49)54-56(46,47)50-13-18-23(53-55(43,44)45)22(40)28(52-18)36-16-35-21-25(30)33-15-34-26(21)36/h15-18,22-24,28,37,40-41H,4-14H2,1-3H3,(H,31,38)(H,32,42)(H,46,47)(H,48,49)(H2,30,33,34)(H2,43,44,45)" -"MNXM90136","InChI=1S/C6H11O9P/c7-3(1-4(8)6(10)11)5(9)2-15-16(12,13)14/h3,5,7,9H,1-2H2,(H,10,11)(H2,12,13,14)" -"MNXM5405","InChI=1S/C29H48N6O15/c1-12(31-25(42)14(3)50-23-19(33-15(4)37)11-49-20(10-36)22(23)40)24(41)34-18(8-9-21(38)39)27(44)35-17(7-5-6-16(30)29(47)48)26(43)32-13(2)28(45)46/h12-14,16-20,22-23,36,40H,5-11,30H2,1-4H3,(H,31,42)(H,32,43)(H,33,37)(H,34,41)(H,35,44)(H,38,39)(H,45,46)(H,47,48)" -"MNXM706","InChI=1S/C29H48N7O18P3S/c1-4-5-6-7-17(37)12-20(39)58-11-10-31-19(38)8-9-32-27(42)24(41)29(2,3)14-51-57(48,49)54-56(46,47)50-13-18-23(53-55(43,44)45)22(40)28(52-18)36-16-35-21-25(30)33-15-34-26(21)36/h15-16,18,22-24,28,40-41H,4-14H2,1-3H3,(H,31,38)(H,32,42)(H,46,47)(H,48,49)(H2,30,33,34)(H2,43,44,45)" -"MNXM553","InChI=1S/C27H46N7O17P3S/c1-4-5-6-7-18(36)55-11-10-29-17(35)8-9-30-25(39)22(38)27(2,3)13-48-54(45,46)51-53(43,44)47-12-16-21(50-52(40,41)42)20(37)26(49-16)34-15-33-19-23(28)31-14-32-24(19)34/h14-16,20-22,26,37-38H,4-13H2,1-3H3,(H,29,35)(H,30,39)(H,43,44)(H,45,46)(H2,28,31,32)(H2,40,41,42)" -"MNXM1281","InChI=1S/C6H11N3O/c7-5(3-10)1-6-2-8-4-9-6/h2,4-5,10H,1,3,7H2,(H,8,9)" -"MNXM1458","InChI=1S/C10H11NO5/c1-5(9(12)13)16-8-4-6(10(14)15)2-3-7(8)11/h2-4,7-8H,1,11H2,(H,12,13)(H,14,15)" -"MNXM32950","InChI=1S/C21H43O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(23)27-18-20(22)19-28-29(24,25)26/h20,22H,2-19H2,1H3,(H2,24,25,26)" -"MNXM2264","InChI=1S/C87H143N7O23P2/c1-56(2)29-18-30-57(3)31-19-32-58(4)33-20-34-59(5)35-21-36-60(6)37-22-38-61(7)39-23-40-62(8)41-24-42-63(9)43-25-44-64(10)45-26-46-65(11)47-27-48-66(12)53-54-113-118(109,110)117-119(111,112)116-87-77(92-71(17)96)79(78(98)75(55-95)115-87)114-70(16)82(101)89-68(14)81(100)94-74(86(107)108)51-52-76(97)93-73(50-28-49-72(88)85(105)106)83(102)90-67(13)80(99)91-69(15)84(103)104/h29,31,33,35,37,39,41,43,45,47,53,67-70,72-75,77-79,87,95,98H,18-28,30,32,34,36,38,40,42,44,46,48-52,54-55,88H2,1-17H3,(H,89,101)(H,90,102)(H,91,99)(H,92,96)(H,93,97)(H,94,100)(H,103,104)(H,105,106)(H,107,108)(H,109,110)(H,111,112)" -"MNXM47","InChI=1S/C17H27N3O17P2/c1-6(22)18-10-13(26)11(24)7(4-21)35-16(10)36-39(31,32)37-38(29,30)33-5-8-12(25)14(27)15(34-8)20-3-2-9(23)19-17(20)28/h2-3,7-8,10-16,21,24-27H,4-5H2,1H3,(H,18,22)(H,29,30)(H,31,32)(H,19,23,28)" -"MNXM722781","InChI=1S/C95H156N8O28P2/c1-58(2)30-19-31-59(3)32-20-33-60(4)34-21-35-61(5)36-22-37-62(6)38-23-39-63(7)40-24-41-64(8)42-25-43-65(9)44-26-45-66(10)46-27-47-67(11)48-28-49-68(12)54-55-125-132(121,122)131-133(123,124)130-95-82(101-74(18)107)86(85(79(57-105)128-95)129-94-81(100-73(17)106)84(110)83(109)78(56-104)127-94)126-72(16)89(113)97-70(14)88(112)103-77(93(119)120)52-53-80(108)102-76(51-29-50-75(96)92(117)118)90(114)98-69(13)87(111)99-71(15)91(115)116/h30,32,34,36,38,40,42,44,46,48,54,69-72,75-79,81-86,94-95,104-105,109-110H,19-29,31,33,35,37,39,41,43,45,47,49-53,55-57,96H2,1-18H3,(H,97,113)(H,98,114)(H,99,111)(H,100,106)(H,101,107)(H,102,108)(H,103,112)(H,115,116)(H,117,118)(H,119,120)(H,121,122)(H,123,124)" -"MNXM31746","InChI=1S/C39H70N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-27(47)22-30(49)68-21-20-41-29(48)18-19-42-37(52)34(51)39(2,3)24-61-67(58,59)64-66(56,57)60-23-28-33(63-65(53,54)55)32(50)38(62-28)46-26-45-31-35(40)43-25-44-36(31)46/h25-28,32-34,38,47,50-51H,4-24H2,1-3H3,(H,41,48)(H,42,52)(H,56,57)(H,58,59)(H2,40,43,44)(H2,53,54,55)" -"MNXM513","InChI=1S/C39H68N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-27(47)22-30(49)68-21-20-41-29(48)18-19-42-37(52)34(51)39(2,3)24-61-67(58,59)64-66(56,57)60-23-28-33(63-65(53,54)55)32(50)38(62-28)46-26-45-31-35(40)43-25-44-36(31)46/h25-26,28,32-34,38,50-51H,4-24H2,1-3H3,(H,41,48)(H,42,52)(H,56,57)(H,58,59)(H2,40,43,44)(H2,53,54,55)" -"MNXM1238","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)" -"MNXM1191","InChI=1S/CHNO/c2-1-3/h3H" +"MNXM194","InChI=1S/C11H14NO9P/c13-8-7(5-20-22(17,18)19)21-10(9(8)14)12-3-1-2-6(4-12)11(15)16/h1-4,7-10,13-14H,5H2,(H2-,15,16,17,18,19)/p+1" +"MNXM412","InChI=1S/C8H14N2O5S/c9-4(7(12)13)1-2-6(11)10-5(3-16)8(14)15/h4-5,16H,1-3,9H2,(H,10,11)(H,12,13)(H,14,15)" +"MNXM188","InChI=1S/C7H7NO2/c8-6-4-2-1-3-5(6)7(9)10/h1-4H,8H2,(H,9,10)" +"MNXM1407","InChI=1S/C4H9O8P/c5-2(3(6)4(7)8)1-12-13(9,10)11/h2-3,5-6H,1H2,(H,7,8)(H2,9,10,11)" +"MNXM1514","InChI=1S/C4H7O8P/c5-2(3(6)4(7)8)1-12-13(9,10)11/h2,5H,1H2,(H,7,8)(H2,9,10,11)" "MNXM759","InChI=1S/C4H10NO7P/c5-3(4(7)8)2(6)1-12-13(9,10)11/h2-3,6H,1,5H2,(H,7,8)(H2,9,10,11)" -"MNXM825","InChI=1S/C37H66N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-25(45)20-28(47)66-19-18-39-27(46)16-17-40-35(50)32(49)37(2,3)22-59-65(56,57)62-64(54,55)58-21-26-31(61-63(51,52)53)30(48)36(60-26)44-24-43-29-33(38)41-23-42-34(29)44/h23-26,30-32,36,45,48-49H,4-22H2,1-3H3,(H,39,46)(H,40,50)(H,54,55)(H,56,57)(H2,38,41,42)(H2,51,52,53)" -"MNXM738","InChI=1S/C37H64N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-25(45)20-28(47)66-19-18-39-27(46)16-17-40-35(50)32(49)37(2,3)22-59-65(56,57)62-64(54,55)58-21-26-31(61-63(51,52)53)30(48)36(60-26)44-24-43-29-33(38)41-23-42-34(29)44/h23-24,26,30-32,36,48-49H,4-22H2,1-3H3,(H,39,46)(H,40,50)(H,54,55)(H,56,57)(H2,38,41,42)(H2,51,52,53)" -"MNXM636","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" -"MNXM561","InChI=1S/C16H25N5O15P2/c17-13-7-14(19-3-18-13)21(4-20-7)15-11(26)9(24)6(33-15)2-32-37(28,29)36-38(30,31)35-16-12(27)10(25)8(23)5(1-22)34-16/h3-6,8-12,15-16,22-27H,1-2H2,(H,28,29)(H,30,31)(H2,17,18,19)" -"MNXM1642","InChI=1S/C14H25N3O14P2/c1-14(23,6-18)8(19)5-29-33(26,27)31-32(24,25)28-4-7-10(20)11(21)12(30-7)17-3-2-9(15)16-13(17)22/h2-3,7-8,10-12,18-21,23H,4-6H2,1H3,(H,24,25)(H,26,27)(H2,15,16,22)" -"MNXM1641","InChI=1S/C14H26N3O17P3/c1-14(6-18,33-35(23,24)25)8(19)5-31-37(28,29)34-36(26,27)30-4-7-10(20)11(21)12(32-7)17-3-2-9(15)16-13(17)22/h2-3,7-8,10-12,18-21H,4-6H2,1H3,(H,26,27)(H,28,29)(H2,15,16,22)(H2,23,24,25)" -"MNXM1757","InChI=1S/C9H13NO7/c11-6(2-4-8(14)15)10-5(9(16)17)1-3-7(12)13/h5H,1-4H2,(H,10,11)(H,12,13)(H,14,15)(H,16,17)" -"MNXM172","InChI=1S/C4H6O3/c5-3-1-2-4(6)7/h3H,1-2H2,(H,6,7)" -"MNXM114079","InChI=1S/C5H8O4/c1-3(6)5(2,9)4(7)8/h9H,1-2H3,(H,7,8)" -"MNXM767","InChI=1S/C35H62N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-23(43)18-26(45)64-17-16-37-25(44)14-15-38-33(48)30(47)35(2,3)20-57-63(54,55)60-62(52,53)56-19-24-29(59-61(49,50)51)28(46)34(58-24)42-22-41-27-31(36)39-21-40-32(27)42/h21-24,28-30,34,43,46-47H,4-20H2,1-3H3,(H,37,44)(H,38,48)(H,52,53)(H,54,55)(H2,36,39,40)(H2,49,50,51)" -"MNXM707","InChI=1S/C35H60N7O18P3S/c1-4-5-6-7-8-9-10-11-12-13-23(43)18-26(45)64-17-16-37-25(44)14-15-38-33(48)30(47)35(2,3)20-57-63(54,55)60-62(52,53)56-19-24-29(59-61(49,50)51)28(46)34(58-24)42-22-41-27-31(36)39-21-40-32(27)42/h21-22,24,28-30,34,46-47H,4-20H2,1-3H3,(H,37,44)(H,38,48)(H,52,53)(H,54,55)(H2,36,39,40)(H2,49,50,51)" -"MNXM2157","InChI=1S/C31H53N3O19P2/c1-3-4-5-6-7-8-9-10-11-12-19(37)15-23(39)51-28-24(32-18(2)36)30(50-20(16-35)26(28)41)52-55(46,47)53-54(44,45)48-17-21-25(40)27(42)29(49-21)34-14-13-22(38)33-31(34)43/h13-14,19-21,24-30,35,37,40-42H,3-12,15-17H2,1-2H3,(H,32,36)(H,44,45)(H,46,47)(H,33,38,43)" -"MNXM211","InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)" -"MNXM548","InChI=1S/C8H12N2O2/c1-5-8(12)7(2-9)6(4-11)3-10-5/h3,11-12H,2,4,9H2,1H3" -"MNXM337","InChI=1S/C10H10O6/c1-5(9(12)13)16-8-4-6(10(14)15)2-3-7(8)11/h2-4,7-8,11H,1H2,(H,12,13)(H,14,15)" -"MNXM1282","InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2" -"MNXM162359","InChI=1S/C9H13N5O4/c10-9-13-7-5(8(18)14-9)12-3(1-11-7)6(17)4(16)2-15/h4,6,15-17H,1-2H2,(H4,10,11,13,14,18)" -"MNXM349","InChI=1S/C2H4O2/c3-1-2-4/h1,4H,2H2" -"MNXM937","InChI=1S/C7H9N5O2/c8-7-11-5-4(6(14)12-7)10-3(2-13)1-9-5/h13H,1-2H2,(H4,8,9,11,12,14)" -"MNXM40570","InChI=1S/C6H12O6/c7-1-3(9)5(11)6(12)4(10)2-8/h1,3-6,8-12H,2H2" -"MNXM807","InChI=1S/C7H7NO4/c9-6(10)4-2-1-3-5(8-4)7(11)12/h1-2,5H,3H2,(H,9,10)(H,11,12)" -"MNXM1742","InChI=1S/C12H24N2O7/c13-7(12(20)21)3-1-2-4-14-5-8(16)10(18)11(19)9(17)6-15/h7,9-11,14-15,17-19H,1-6,13H2,(H,20,21)" -"MNXM565","InChI=1S/C14H18N5O11P/c20-7(21)1-5(14(24)25)18-11-8-12(16-3-15-11)19(4-17-8)13-10(23)9(22)6(30-13)2-29-31(26,27)28/h3-6,9-10,13,22-23H,1-2H2,(H,20,21)(H,24,25)(H,15,16,18)(H2,26,27,28)" -"MNXM648","InChI=1S/C9H16N5O8P/c10-3-6(13-9(11)14-7(3)17)12-8-5(16)4(15)2(22-8)1-21-23(18,19)20/h2,4-5,8,15-16H,1,10H2,(H2,18,19,20)(H4,11,12,13,14,17)" -"MNXM811","InChI=1S/C40H68O7P2/c1-33(2)17-10-18-34(3)19-11-20-35(4)21-12-22-36(5)23-13-24-37(6)25-14-26-38(7)27-15-28-39(8)29-16-30-40(9)31-32-46-49(44,45)47-48(41,42)43/h17,19,21,23,25,27,29,31H,10-16,18,20,22,24,26,28,30,32H2,1-9H3,(H,44,45)(H2,41,42,43)" +"MNXM1219","InChI=1S/C7H13O10P/c8-3(1-4(9)7(12)13)6(11)5(10)2-17-18(14,15)16/h3,5-6,8,10-11H,1-2H2,(H,12,13)(H2,14,15,16)" +"MNXM454","InChI=1S/C8H12NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2,10-11H,3-4H2,1H3,(H2,12,13,14)" +"MNXM161","InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)" "MNXM1184","InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h1,3-5,7-9H,2H2,(H2,10,11,12)" -"MNXM432","InChI=1S/C10H14N5O6P/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(21-7)2-20-22(17,18)19/h3-7,16H,1-2H2,(H2,11,12,13)(H2,17,18,19)" -"MNXM89661","InChI=1S/C6H8O7/c7-3(8)1-2(5(10)11)4(9)6(12)13/h2,4,9H,1H2,(H,7,8)(H,10,11)(H,12,13)" -"MNXM1390","InChI=1S/C15H23N3O16P2/c19-5-16-6-3-30-14(12(24)9(6)21)33-36(28,29)34-35(26,27)31-4-7-10(22)11(23)13(32-7)18-2-1-8(20)17-15(18)25/h1-2,5-7,9-14,21-24H,3-4H2,(H,16,19)(H,26,27)(H,28,29)(H,17,20,25)" -"MNXM1255","InChI=1S/C3H8O2/c1-3(5)2-4/h3-5H,2H2,1H3" -"MNXM1199","InChI=1S/C43H77N3O20P2/c1-3-5-7-9-11-13-15-17-19-21-29(48)25-34(51)44-36-40(64-35(52)26-30(49)22-20-18-16-14-12-10-8-6-4-2)38(54)31(27-47)63-42(36)65-68(59,60)66-67(57,58)61-28-32-37(53)39(55)41(62-32)46-24-23-33(50)45-43(46)56/h23-24,29-32,36-42,47-49,53-55H,3-22,25-28H2,1-2H3,(H,44,51)(H,57,58)(H,59,60)(H,45,50,56)" -"MNXM1839","InChI=1S/C34H66NO12P/c1-3-5-7-9-11-13-15-17-19-21-26(37)23-29(39)35-31-33(32(41)28(25-36)45-34(31)47-48(42,43)44)46-30(40)24-27(38)22-20-18-16-14-12-10-8-6-4-2/h26-28,31-34,36-38,41H,3-25H2,1-2H3,(H,35,39)(H2,42,43,44)" -"MNXM1569","InChI=1S/C68H129N2O20P/c1-5-9-13-17-21-25-29-33-37-41-51(72)45-57(76)69-61-65(88-59(78)47-53(74)43-39-35-31-27-23-19-15-11-7-3)63(80)55(49-71)86-67(61)85-50-56-64(81)66(89-60(79)48-54(75)44-40-36-32-28-24-20-16-12-8-4)62(68(87-56)90-91(82,83)84)70-58(77)46-52(73)42-38-34-30-26-22-18-14-10-6-2/h51-56,61-68,71-75,80-81H,5-50H2,1-4H3,(H,69,76)(H,70,77)(H2,82,83,84)" -"MNXM5748","InChI=1S/C30H29N3O16/c34-10-16(31-25(41)13-4-1-7-19(35)22(13)38)29(46)49-12-18(33-27(43)15-6-3-9-21(37)24(15)40)30(47)48-11-17(28(44)45)32-26(42)14-5-2-8-20(36)23(14)39/h1-9,16-18,34-40H,10-12H2,(H,31,41)(H,32,42)(H,33,43)(H,44,45)" -"MNXM390","InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2" -"MNXM6016","InChI=1S/C114H208N2O39P2/c1-7-13-19-25-31-37-39-40-42-48-54-59-65-71-95(126)145-85(69-63-57-51-45-35-29-23-17-11-5)75-94(125)116-100-108(150-98(129)76-86(70-64-58-52-46-36-30-24-18-12-6)146-96(127)72-66-60-53-47-41-38-32-26-20-14-8-2)106(154-156(137,138)139)92(82-144-113(111(133)134)78-90(102(131)105(152-113)89(123)80-118)151-114(112(135)136)77-87(121)101(130)104(153-114)88(122)79-117)148-109(100)143-81-91-103(132)107(149-97(128)74-84(120)68-62-56-50-44-34-28-22-16-10-4)99(110(147-91)155-157(140,141)142)115-93(124)73-83(119)67-61-55-49-43-33-27-21-15-9-3/h37,39,83-92,99-110,117-123,130-132H,7-36,38,40-82H2,1-6H3,(H,115,124)(H,116,125)(H,133,134)(H,135,136)(H2,137,138,139)(H2,140,141,142)" -"MNXM1004","InChI=1S/C12H23O14P/c13-1-4-7(16)10(19)12(3-14,25-4)26-11-9(18)8(17)6(15)5(24-11)2-23-27(20,21)22/h4-11,13-19H,1-3H2,(H2,20,21,22)" -"MNXM386","InChI=1S/C5H6N2O2/c1-3-2-6-5(9)7-4(3)8/h2H,1H3,(H2,6,7,8,9)" -"MNXM451","InChI=1S/C16H24N2O15P2/c1-6-4-18(16(24)17-14(6)23)10-3-8(19)9(31-10)5-29-34(25,26)33-35(27,28)32-15-13(22)12(21)11(20)7(2)30-15/h4,7-10,12-13,15,19,21-22H,3,5H2,1-2H3,(H,25,26)(H,27,28)(H,17,23,24)" -"MNXM1409","InChI=1S/C9H14N3O9P/c13-6-4(2-20-22(17,18)19)21-8(7(6)14)12-3-10-1-5(12)11-9(15)16/h1,3-4,6-8,11,13-14H,2H2,(H,15,16)(H2,17,18,19)" -"MNXM1378","InChI=1S/C9H16N2O4/c10-7(9(14)15)3-4-8(13)11-5-1-2-6-12/h6-7H,1-5,10H2,(H,11,13)(H,14,15)" -"MNXM1693","InChI=1S/C9H10O6/c10-6(4-5-8(12)13)2-1-3-7(11)9(14)15/h1-3,11H,4-5H2,(H,12,13)(H,14,15)" -"MNXM436","InChI=1S/C10H15N5O10P2/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(24-6)2-23-27(21,22)25-26(18,19)20/h3-6,16H,1-2H2,(H,21,22)(H2,18,19,20)(H3,11,13,14,17)" -"MNXM1384","InChI=1S/C7H12NO8P/c1-4(9)8-5(7(11)12)2-3-6(10)16-17(13,14)15/h5H,2-3H2,1H3,(H,8,9)(H,11,12)(H2,13,14,15)" -"MNXM88505","InChI=1S/C61H100NO8P/c1-47(2)23-13-24-48(3)25-14-26-49(4)27-15-28-50(5)29-16-30-51(6)31-17-32-52(7)33-18-34-53(8)35-19-36-54(9)37-20-38-55(10)39-21-40-56(11)41-22-42-57(12)43-44-69-71(66,67)70-60-58(64)59(65)61(62,45-63)46-68-60/h23,25,27,29,31,33,35,37,39,41,43,45,58-60,64-65H,13-22,24,26,28,30,32,34,36,38,40,42,44,46,62H2,1-12H3,(H,66,67)" -"MNXM48518","InChI=1S/C7H16O13P2/c8-2(1-18-21(12,13)14)6-4(10)3(9)5(11)7(19-6)20-22(15,16)17/h2-11H,1H2,(H2,12,13,14)(H2,15,16,17)" -"MNXM1280","InChI=1S/C5H10NO7P/c6-3(5(8)9)1-2-4(7)13-14(10,11)12/h3H,1-2,6H2,(H,8,9)(H2,10,11,12)" +"MNXM311","InChI=1S/C8H9NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,4,10,12H,3H2,1H3" +"MNXM722774","InChI=1S/C8H15O11P/c9-3(1-4(10)8(14)15)6(12)7(13)5(11)2-19-20(16,17)18/h3,5-7,9,11-13H,1-2H2,(H,14,15)(H2,16,17,18)" +"MNXM36403","InChI=1S/C8H14O8/c9-2-4(11)6-5(12)3(10)1-8(15,16-6)7(13)14/h3-6,9-12,15H,1-2H2,(H,13,14)" +"MNXM1953","InChI=1S/C23H36N4O20P2/c1-8(21(35)36)24-19(34)9(2)43-18-14(25-10(3)29)22(45-11(6-28)16(18)32)46-49(40,41)47-48(38,39)42-7-12-15(31)17(33)20(44-12)27-5-4-13(30)26-23(27)37/h4-5,8-9,11-12,14-18,20,22,28,31-33H,6-7H2,1-3H3,(H,24,34)(H,25,29)(H,35,36)(H,38,39)(H,40,41)(H,26,30,37)" +"MNXM419","InChI=1S/C8H11NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,10-12H,3-4H2,1H3" +"MNXM955","InChI=1S/C28H43N5O23P2/c1-10(23(42)31-13(26(44)45)4-5-17(37)38)29-24(43)11(2)52-22-18(30-12(3)35)27(54-14(8-34)20(22)40)55-58(49,50)56-57(47,48)51-9-15-19(39)21(41)25(53-15)33-7-6-16(36)32-28(33)46/h6-7,10-11,13-15,18-22,25,27,34,39-41H,4-5,8-9H2,1-3H3,(H,29,43)(H,30,35)(H,31,42)(H,37,38)(H,44,45)(H,47,48)(H,49,50)(H,32,36,46)" +"MNXM162592","InChI=1S/C35H55N7O26P2/c1-13(28(50)40-18(33(56)57)7-8-21(45)39-17(32(54)55)6-4-5-16(36)31(52)53)37-29(51)14(2)64-27-23(38-15(3)44)34(66-19(11-43)25(27)48)67-70(61,62)68-69(59,60)63-12-20-24(47)26(49)30(65-20)42-10-9-22(46)41-35(42)58/h9-10,13-14,16-20,23-27,30,34,43,47-49H,4-8,11-12,36H2,1-3H3,(H,37,51)(H,38,44)(H,39,45)(H,40,50)(H,52,53)(H,54,55)(H,56,57)(H,59,60)(H,61,62)(H,41,46,58)" +"MNXM599","InChI=1S/C4H5NO4/c5-2(4(8)9)1-3(6)7/h5H,1H2,(H,6,7)(H,8,9)" +"MNXM1954","InChI=1S/C41H65N9O28P2/c1-15(32(58)45-17(3)37(62)63)44-35(61)21(8-6-7-20(42)38(64)65)47-25(53)10-9-22(39(66)67)48-33(59)16(2)43-34(60)18(4)74-31-27(46-19(5)52)40(76-23(13-51)29(31)56)77-80(71,72)78-79(69,70)73-14-24-28(55)30(57)36(75-24)50-12-11-26(54)49-41(50)68/h11-12,15-18,20-24,27-31,36,40,51,55-57H,6-10,13-14,42H2,1-5H3,(H,43,60)(H,44,61)(H,45,58)(H,46,52)(H,47,53)(H,48,59)(H,62,63)(H,64,65)(H,66,67)(H,69,70)(H,71,72)(H,49,54,68)" +"MNXM555","InChI=1S/C7H5NO4/c9-6(10)4-2-1-3-8-5(4)7(11)12/h1-3H,(H,9,10)(H,11,12)" +"MNXM2264","InChI=1S/C87H143N7O23P2/c1-56(2)29-18-30-57(3)31-19-32-58(4)33-20-34-59(5)35-21-36-60(6)37-22-38-61(7)39-23-40-62(8)41-24-42-63(9)43-25-44-64(10)45-26-46-65(11)47-27-48-66(12)53-54-113-118(109,110)117-119(111,112)116-87-77(92-71(17)96)79(78(98)75(55-95)115-87)114-70(16)82(101)89-68(14)81(100)94-74(86(107)108)51-52-76(97)93-73(50-28-49-72(88)85(105)106)83(102)90-67(13)80(99)91-69(15)84(103)104/h29,31,33,35,37,39,41,43,45,47,53,67-70,72-75,77-79,87,95,98H,18-28,30,32,34,36,38,40,42,44,46,48-52,54-55,88H2,1-17H3,(H,89,101)(H,90,102)(H,91,99)(H,92,96)(H,93,97)(H,94,100)(H,103,104)(H,105,106)(H,107,108)(H,109,110)(H,111,112)" +"MNXM355","InChI=1S/C11H15N2O8P/c12-10(16)6-2-1-3-13(4-6)11-9(15)8(14)7(21-11)5-20-22(17,18)19/h1-4,7-9,11,14-15H,5H2,(H3-,12,16,17,18,19)/p+1" "MNXM251","InChI=1S/C55H91O4P/c1-45(2)23-13-24-46(3)25-14-26-47(4)27-15-28-48(5)29-16-30-49(6)31-17-32-50(7)33-18-34-51(8)35-19-36-52(9)37-20-38-53(10)39-21-40-54(11)41-22-42-55(12)43-44-59-60(56,57)58/h23,25,27,29,31,33,35,37,39,41,43H,13-22,24,26,28,30,32,34,36,38,40,42,44H2,1-12H3,(H2,56,57,58)" -"MNXM316","InChI=1S/C10H13N5O3/c1-4-6(16)7(17)10(18-4)15-3-14-5-8(11)12-2-13-9(5)15/h2-4,6-7,10,16-17H,1H3,(H2,11,12,13)" -"MNXM145568","InChI=1S/C6H13O9P/c7-1-3-4(8)5(9)6(10,15-3)2-14-16(11,12)13/h3-5,7-10H,1-2H2,(H2,11,12,13)" -"MNXM535","InChI=1S/C17H26N3O15P/c18-9-1-2-20(16(29)19-9)14-12(26)11(25)8(33-14)5-32-36(30,31)35-17(15(27)28)3-6(22)10(24)13(34-17)7(23)4-21/h1-2,6-8,10-14,21-26H,3-5H2,(H,27,28)(H,30,31)(H2,18,19,29)" -"MNXM75133","InChI=1S/C131H240N2O63P4/c1-7-13-19-25-31-37-38-44-50-56-62-68-98(149)180-85(66-60-54-48-42-35-29-23-17-11-5)72-100(151)184-119-102(133-96(147)71-84(65-59-53-47-41-34-28-22-16-10-4)179-97(148)67-61-55-49-43-36-30-24-18-12-6)123(177-80-93-104(153)118(183-99(150)70-83(139)64-58-52-46-40-33-27-21-15-9-3)101(124(181-93)196-200(173,174)175)132-95(146)69-82(138)63-57-51-45-39-32-26-20-14-8-2)182-94(117(119)193-197(164,165)166)81-178-130(128(160)161)74-92(190-131(129(162)163)73-86(140)103(152)112(191-131)88(142)76-135)116(115(192-130)90(144)78-137)188-127-110(159)120(122(195-199(170,171)172)113(186-127)89(143)77-136)189-126-109(158)107(156)121(194-198(167,168)169)114(187-126)91(145)79-176-125-108(157)105(154)106(155)111(185-125)87(141)75-134/h82-94,101-127,134-145,152-159H,7-81H2,1-6H3,(H,132,146)(H,133,147)(H,160,161)(H,162,163)(H2,164,165,166)(H2,167,168,169)(H2,170,171,172)(H2,173,174,175)" -"MNXM687","InChI=1S/C10H12N4O6/c15-1-3-5(16)6(17)9(20-3)14-2-11-4-7(14)12-10(19)13-8(4)18/h2-3,5-6,9,15-17H,1H2,(H2,12,13,18,19)" -"MNXM2323","InChI=1S/C4H9O6P/c1-3(5)4(6)2-10-11(7,8)9/h4,6H,2H2,1H3,(H2,7,8,9)" -"MNXM1168","InChI=1S/C5H12O9P2/c1-5(3-6)4(7)2-12-15(8,9)14-16(10,11)13-5/h4,6-7H,2-3H2,1H3,(H,8,9)(H,10,11)" -"MNXM336","InChI=1S/C6H13O9P/c7-1-2-3(8)4(9)5(10)6(14-2)15-16(11,12)13/h2-10H,1H2,(H2,11,12,13)" -"MNXM34740","InChI=1S/C22H45O9P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-22(26)31-21(17-24)19-30-32(27,28)29-18-20(25)16-23/h20-21,23-25H,2-19H2,1H3,(H,27,28)" -"MNXM32179","InChI=1S/C38H75O10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-37(41)45-33-36(34-47-49(43,44)46-32-35(40)31-39)48-38(42)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h35-36,39-40H,3-34H2,1-2H3,(H,43,44)" -"MNXM210","InChI=1S/C9H8O3/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-6,10H,(H,11,12)" -"MNXM1313","InChI=1S/C13H18N4O6/c1-5-6(2)17(3-7(19)10(21)8(20)4-18)11-9(14-5)12(22)16-13(23)15-11/h7-8,10,18-21H,3-4H2,1-2H3,(H,16,22,23)" -"MNXM405","InChI=1S/C5H9NO3/c6-3-4(7)1-2-5(8)9/h1-3,6H2,(H,8,9)" -"MNXM963","InChI=1S/C6H10O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h3-5,7,9-11H,1H2,(H,12,13)" -"MNXM1499","InChI=1S/C3H7O5P/c1-2-3(4)8-9(5,6)7/h2H2,1H3,(H2,5,6,7)" -"MNXM4545","InChI=1S/C6H13O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h1,3-6,8-11H,2H2,(H2,12,13,14)" -"MNXM463","InChI=1S/C7H15N2O8P/c8-1-4(10)9-7-6(12)5(11)3(17-7)2-16-18(13,14)15/h3,5-7,11-12H,1-2,8H2,(H,9,10)(H2,13,14,15)" -"MNXM453","InChI=1S/C8H15N2O9P/c11-3-9-1-5(12)10-8-7(14)6(13)4(19-8)2-18-20(15,16)17/h3-4,6-8,13-14H,1-2H2,(H,9,11)(H,10,12)(H2,15,16,17)" -"MNXM580","InChI=1S/C31H52N7O17P3S/c1-4-5-6-7-8-9-10-11-22(40)59-15-14-33-21(39)12-13-34-29(43)26(42)31(2,3)17-52-58(49,50)55-57(47,48)51-16-20-25(54-56(44,45)46)24(41)30(53-20)38-19-37-23-27(32)35-18-36-28(23)38/h10-11,18-20,24-26,30,41-42H,4-9,12-17H2,1-3H3,(H,33,39)(H,34,43)(H,47,48)(H,49,50)(H2,32,35,36)(H2,44,45,46)" -"MNXM198","InChI=1S/C12H22O11/c13-1-3-5(15)7(17)9(19)11(21-3)23-12-10(20)8(18)6(16)4(2-14)22-12/h3-20H,1-2H2" -"MNXM164","InChI=1S/C7H6O3/c8-6-3-1-5(2-4-6)7(9)10/h1-4,8H,(H,9,10)" +"MNXM722781","InChI=1S/C95H156N8O28P2/c1-58(2)30-19-31-59(3)32-20-33-60(4)34-21-35-61(5)36-22-37-62(6)38-23-39-63(7)40-24-41-64(8)42-25-43-65(9)44-26-45-66(10)46-27-47-67(11)48-28-49-68(12)54-55-125-132(121,122)131-133(123,124)130-95-82(101-74(18)107)86(85(79(57-105)128-95)129-94-81(100-73(17)106)84(110)83(109)78(56-104)127-94)126-72(16)89(113)97-70(14)88(112)103-77(93(119)120)52-53-80(108)102-76(51-29-50-75(96)92(117)118)90(114)98-69(13)87(111)99-71(15)91(115)116/h30,32,34,36,38,40,42,44,46,48,54,69-72,75-79,81-86,94-95,104-105,109-110H,19-29,31,33,35,37,39,41,43,45,47,49-53,55-57,96H2,1-18H3,(H,97,113)(H,98,114)(H,99,111)(H,100,106)(H,101,107)(H,102,108)(H,103,112)(H,115,116)(H,117,118)(H,119,120)(H,121,122)(H,123,124)" +"MNXM309","InChI=1S/C21H26N6O15P2/c22-17-12-18(24-7-23-17)27(8-25-12)20-16(31)14(29)11(41-20)6-39-44(36,37)42-43(34,35)38-5-10-13(28)15(30)19(40-10)26-3-1-2-9(4-26)21(32)33/h1-4,7-8,10-11,13-16,19-20,28-31H,5-6H2,(H4-,22,23,24,32,33,34,35,36,37)/p+1" +"MNXM5043","InChI=1S/C55H92O7P2/c1-45(2)23-13-24-46(3)25-14-26-47(4)27-15-28-48(5)29-16-30-49(6)31-17-32-50(7)33-18-34-51(8)35-19-36-52(9)37-20-38-53(10)39-21-40-54(11)41-22-42-55(12)43-44-61-64(59,60)62-63(56,57)58/h23,25,27,29,31,33,35,37,39,41,43H,13-22,24,26,28,30,32,34,36,38,40,42,44H2,1-12H3,(H,59,60)(H2,56,57,58)" +"MNXM959","InChI=1S/C6H10O4/c1-6(2,3-7)4(8)5(9)10/h7H,3H2,1-2H3,(H,9,10)" +"MNXM183","InChI=1S/C20H23N7O6/c21-20-24-16-15(18(31)25-20)27-9-26(8-12(27)7-22-16)11-3-1-10(2-4-11)17(30)23-13(19(32)33)5-6-14(28)29/h1-4,12-13H,5-9H2,(H,23,30)(H,28,29)(H,32,33)(H4,21,22,24,25,31)" +"MNXM593","InChI=1S/C6H12O4/c1-6(2,3-7)4(8)5(9)10/h4,7-8H,3H2,1-2H3,(H,9,10)" +"MNXM364","InChI=1S/C9H17NO5/c1-9(2,5-11)7(14)8(15)10-4-3-6(12)13/h7,11,14H,3-5H2,1-2H3,(H,10,15)(H,12,13)" +"MNXM662","InChI=1S/C12H17N4O4PS/c1-8-11(3-4-20-21(17,18)19)22-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H3-,13,14,15,17,18,19)/p+1" "MNXM415","InChI=1S/C9H18NO8P/c1-9(2,5-18-19(15,16)17)7(13)8(14)10-4-3-6(11)12/h7,13H,3-5H2,1-2H3,(H,10,14)(H,11,12)(H2,15,16,17)" -"MNXM669","InChI=1S/C6H12N2O3/c1-3(7)5(9)8-4(2)6(10)11/h3-4H,7H2,1-2H3,(H,8,9)(H,10,11)" -"MNXM480","InChI=1S/C7H9NO4/c9-6(10)4-2-1-3-5(8-4)7(11)12/h4H,1-3H2,(H,9,10)(H,11,12)" +"MNXM256","InChI=1S/C12H18N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H4-,13,14,15,17,18,19,20,21)/p+1" "MNXM483","InChI=1S/C12H23N2O9PS/c1-12(2,6-23-24(20,21)22)9(16)10(17)13-4-3-8(15)14-7(5-25)11(18)19/h7,9,16,25H,3-6H2,1-2H3,(H,13,17)(H,14,15)(H,18,19)(H2,20,21,22)" -"MNXM1627","InChI=1S/C6H10O6/c7-2-5(10)3(8)1-4(9)6(11)12/h3,5,7-8,10H,1-2H2,(H,11,12)" -"MNXM4512","InChI=1S/C40H73N3O15P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-35(44)53-29-32(56-36(45)26-24-22-20-18-16-14-12-10-8-6-4-2)30-54-59(49,50)58-60(51,52)55-31-33-37(46)38(47)39(57-33)43-28-27-34(41)42-40(43)48/h27-28,32-33,37-39,46-47H,3-26,29-31H2,1-2H3,(H,49,50)(H,51,52)(H2,41,42,48)" -"MNXM1406","InChI=1S/C9H16N2O5/c10-6(9(15)16)3-4-7(12)11-5-1-2-8(13)14/h6H,1-5,10H2,(H,11,12)(H,13,14)(H,15,16)" -"MNXM6160","InChI=1S/C79H129N3O22P2/c1-50(2)27-17-28-51(3)29-18-30-52(4)31-19-32-53(5)33-20-34-54(6)35-21-36-55(7)37-22-38-56(8)39-23-40-57(9)41-24-42-58(10)43-25-44-59(11)45-26-46-60(12)47-48-97-105(93,94)104-106(95,96)103-78-68(82-64(16)86)70(88)73(65(49-83)99-78)100-77-67(81-63(15)85)71(89)74(75(102-77)76(91)92)101-79-72(90)69(87)66(61(13)98-79)80-62(14)84/h27,29,31,33,35,37,39,41,43,45,47,61,65-75,77-79,83,87-90H,17-26,28,30,32,34,36,38,40,42,44,46,48-49H2,1-16H3,(H,80,84)(H,81,85)(H,82,86)(H,91,92)(H,93,94)(H,95,96)" -"MNXM261","InChI=1S/C3H8O10P2/c4-2(1-12-14(6,7)8)3(5)13-15(9,10)11/h2,4H,1H2,(H2,6,7,8)(H2,9,10,11)" -"MNXM1456","InChI=1S/C6H9N2O5P/c9-6(3-13-14(10,11)12)1-5-2-7-4-8-5/h2,4H,1,3H2,(H,7,8)(H2,10,11,12)" -"MNXM2195","InChI=1S/C47H70O3/c1-36(2)17-10-18-37(3)19-11-20-38(4)21-12-22-39(5)23-13-24-40(6)25-14-26-41(7)27-15-28-42(8)29-16-30-43(9)31-32-44-35-45(47(49)50)33-34-46(44)48/h17,19,21,23,25,27,29,31,33-35,48H,10-16,18,20,22,24,26,28,30,32H2,1-9H3,(H,49,50)" -"MNXM55193","InChI=1S/C169H302N2O94P4/c1-8-14-20-26-32-38-39-45-51-57-63-69-112(192)239-93(67-61-55-49-43-36-30-24-18-12-5)73-114(194)247-147-116(171-110(190)72-92(66-60-54-48-42-35-29-23-17-11-4)238-111(191)68-62-56-50-44-37-31-25-19-13-6)154(234-86-106-122(200)146(246-113(193)71-91(181)65-59-53-47-41-34-28-22-16-10-3)115(155(243-106)265-269(230,231)232)170-109(189)70-90(180)64-58-52-46-40-33-27-21-15-9-2)245-108(145(147)262-266(221,222)223)88-236-167(164(215)216)75-101(258-169(166(219)220)76-102(257-168(165(217)218)74-94(182)118(196)138(259-168)96(184)78-173)144(142(261-169)99(187)81-176)251-158-132(210)124(202)117(195)89(7)237-158)143(141(260-167)98(186)80-175)252-161-135(213)149(152(263-267(224,225)226)139(249-161)97(185)79-174)255-162-136(214)150(153(264-268(227,228)229)140(250-162)100(188)85-233-157-131(209)127(205)129(207)137(248-157)95(183)77-172)254-160-134(212)148(123(201)107(244-160)87-235-156-130(208)125(203)119(197)103(82-177)240-156)253-163-151(128(206)121(199)105(84-179)242-163)256-159-133(211)126(204)120(198)104(83-178)241-159/h89-108,115-163,172-188,195-214H,8-88H2,1-7H3,(H,170,189)(H,171,190)(H,215,216)(H,217,218)(H,219,220)(H2,221,222,223)(H2,224,225,226)(H2,227,228,229)(H2,230,231,232)" -"MNXM47647","InChI=1S/C176H314N2O100P4/c1-8-14-20-26-32-38-39-45-51-57-63-69-114(200)251-94(67-61-55-49-43-36-30-24-18-12-5)73-116(202)259-153-118(178-112(198)72-93(66-60-54-48-42-35-29-23-17-11-4)250-113(199)68-62-56-50-44-37-31-25-19-13-6)160(245-87-108-124(208)152(258-115(201)71-92(188)65-59-53-47-41-34-28-22-16-10-3)117(161(254-108)278-282(241,242)243)177-111(197)70-91(187)64-58-52-46-40-33-27-21-15-9-2)257-110(151(153)275-279(232,233)234)89-248-174(171(226)227)75-103(271-176(173(230)231)76-104(270-175(172(228)229)74-95(189)120(204)144(272-175)98(192)79-181)150(148(274-176)101(195)82-184)264-165-137(221)126(210)119(203)90(7)249-165)149(147(273-174)100(194)81-183)265-168-140(224)155(158(276-280(235,236)237)145(262-168)99(193)80-182)268-169-141(225)156(159(277-281(238,239)240)146(263-169)102(196)85-244-163-135(219)129(213)132(216)142(260-163)96(190)77-179)267-167-139(223)154(125(209)109(256-167)88-246-162-134(218)127(211)121(205)105(83-185)252-162)266-170-157(131(215)122(206)106(84-186)253-170)269-166-138(222)128(212)123(207)107(255-166)86-247-164-136(220)130(214)133(217)143(261-164)97(191)78-180/h90-110,117-170,179-196,203-225H,8-89H2,1-7H3,(H,177,197)(H,178,198)(H,226,227)(H,228,229)(H,230,231)(H2,232,233,234)(H2,235,236,237)(H2,238,239,240)(H2,241,242,243)" -"MNXM32181","InChI=1S/C38H74NO10P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-36(40)46-31-34(32-47-50(44,45)48-33-35(39)38(42)43)49-37(41)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h34-35H,3-33,39H2,1-2H3,(H,42,43)(H,44,45)" -"MNXM753","InChI=1S/C27H44N7O17P3S/c1-4-5-6-7-18(36)55-11-10-29-17(35)8-9-30-25(39)22(38)27(2,3)13-48-54(45,46)51-53(43,44)47-12-16-21(50-52(40,41)42)20(37)26(49-16)34-15-33-19-23(28)31-14-32-24(19)34/h6-7,14-16,20-22,26,37-38H,4-5,8-13H2,1-3H3,(H,29,35)(H,30,39)(H,43,44)(H,45,46)(H2,28,31,32)(H2,40,41,42)" -"MNXM1777","InChI=1S/C9H17NO6S/c10-4(8(13)14)1-2-17-3-5-6(11)7(12)9(15)16-5/h4-7,9,11-12,15H,1-3,10H2,(H,13,14)" -"MNXM479745","InChI=1S/C8H16N3O8P/c9-5(1-10-3-12)11-8-7(14)6(13)4(19-8)2-18-20(15,16)17/h3-4,6-8,13-14H,1-2H2,(H2,9,11)(H,10,12)(H2,15,16,17)" -"MNXM733","InChI=1S/C33H58N7O18P3S/c1-4-5-6-7-8-9-10-11-21(41)16-24(43)62-15-14-35-23(42)12-13-36-31(46)28(45)33(2,3)18-55-61(52,53)58-60(50,51)54-17-22-27(57-59(47,48)49)26(44)32(56-22)40-20-39-25-29(34)37-19-38-30(25)40/h19-22,26-28,32,41,44-45H,4-18H2,1-3H3,(H,35,42)(H,36,46)(H,50,51)(H,52,53)(H2,34,37,38)(H2,47,48,49)" -"MNXM705","InChI=1S/C33H56N7O18P3S/c1-4-5-6-7-8-9-10-11-21(41)16-24(43)62-15-14-35-23(42)12-13-36-31(46)28(45)33(2,3)18-55-61(52,53)58-60(50,51)54-17-22-27(57-59(47,48)49)26(44)32(56-22)40-20-39-25-29(34)37-19-38-30(25)40/h19-20,22,26-28,32,44-45H,4-18H2,1-3H3,(H,35,42)(H,36,46)(H,50,51)(H,52,53)(H2,34,37,38)(H2,47,48,49)" -"MNXM1754","InChI=1S/C68H130N2O23P2/c1-5-9-13-17-21-25-29-33-37-41-51(72)45-57(76)69-61-65(90-59(78)47-53(74)43-39-35-31-27-23-19-15-11-7-3)63(80)56(89-68(61)93-95(84,85)86)50-87-67-62(70-58(77)46-52(73)42-38-34-30-26-22-18-14-10-6-2)66(64(55(49-71)88-67)92-94(81,82)83)91-60(79)48-54(75)44-40-36-32-28-24-20-16-12-8-4/h51-56,61-68,71-75,80H,5-50H2,1-4H3,(H,69,76)(H,70,77)(H2,81,82,83)(H2,84,85,86)" -"MNXM1206","InChI=1S/C76H142N2O30P2/c1-5-9-13-17-21-25-29-33-37-41-53(80)45-61(86)77-65-71(104-63(88)47-55(82)43-39-35-31-27-23-19-15-11-7-3)68(91)59(102-74(65)108-110(97,98)99)51-100-73-66(78-62(87)46-54(81)42-38-34-30-26-22-18-14-10-6-2)72(105-64(89)48-56(83)44-40-36-32-28-24-20-16-12-8-4)70(107-109(94,95)96)60(103-73)52-101-76(75(92)93)49-57(84)67(90)69(106-76)58(85)50-79/h53-60,65-74,79-85,90-91H,5-52H2,1-4H3,(H,77,86)(H,78,87)(H,92,93)(H2,94,95,96)(H2,97,98,99)" -"MNXM820","InChI=1S/C8H13NO6/c9-5(8(13)14)3-4-15-7(12)2-1-6(10)11/h5H,1-4,9H2,(H,10,11)(H,13,14)" -"MNXM1653","InChI=1S/C6H12O2/c1-2-3-4-5-6(7)8/h2-5H2,1H3,(H,7,8)" -"MNXM478","InChI=1S/C7H10O6/c8-3-1-7(13,6(11)12)2-4(9)5(3)10/h3,5,8,10,13H,1-2H2,(H,11,12)" -"MNXM1045","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" -"MNXM2582","InChI=1S/C124H226N2O51P2/c1-7-13-19-25-31-37-38-44-50-56-62-68-96(141)164-84(66-60-54-48-42-35-29-23-17-11-5)72-98(143)168-115-100(126-94(139)71-83(65-59-53-47-41-34-28-22-16-10-4)163-95(140)67-61-55-49-43-36-30-24-18-12-6)117(161-79-91-102(145)114(167-97(142)70-82(132)64-58-52-46-40-33-27-21-15-9-3)99(118(165-91)177-179(158,159)160)125-93(138)69-81(131)63-57-51-45-39-32-26-20-14-8-2)166-92(113(115)176-178(155,156)157)80-162-123(121(151)152)74-90(173-124(122(153)154)73-85(133)101(144)110(174-124)88(136)77-129)112(111(175-123)89(137)78-130)171-120-107(150)116(106(149)109(170-120)87(135)76-128)172-119-105(148)103(146)104(147)108(169-119)86(134)75-127/h81-92,99-120,127-137,144-150H,7-80H2,1-6H3,(H,125,138)(H,126,139)(H,151,152)(H,153,154)(H2,155,156,157)(H2,158,159,160)" -"MNXM611","InChI=1S/C7H8O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1,5-6,9-10H,2H2,(H,11,12)" +"MNXM373","InChI=1S/C11H23N2O7PS/c1-11(2,7-20-21(17,18)19)9(15)10(16)13-4-3-8(14)12-5-6-22/h9,15,22H,3-7H2,1-2H3,(H,12,14)(H,13,16)(H2,17,18,19)" "MNXM1532","InChI=1S/C9H15N4O9P/c10-3-6(12-9(17)13-7(3)16)11-8-5(15)4(14)2(22-8)1-21-23(18,19)20/h2,4-5,8,14-15H,1,10H2,(H2,18,19,20)(H3,11,12,13,16,17)" -"MNXM3470","InChI=1S/C9H17O12P/c10-1-3(8(14)15)20-9-7(13)6(12)5(11)4(21-9)2-19-22(16,17)18/h3-7,9-13H,1-2H2,(H,14,15)(H2,16,17,18)" -"MNXM943","InChI=1S/C5H14N2/c6-4-2-1-3-5-7/h1-7H2" -"MNXM3426","InChI=1S/C17H35O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-17(19)23-14-16(18)15-24-25(20,21)22/h16,18H,2-15H2,1H3,(H2,20,21,22)" -"MNXM597","InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2" -"MNXM863","InChI=1S/C42H46N4O16/c1-41(17-39(59)60)23(5-9-35(51)52)29-14-27-21(11-37(55)56)19(3-7-33(47)48)25(43-27)13-26-20(4-8-34(49)50)22(12-38(57)58)28(44-26)15-31-42(2,18-40(61)62)24(6-10-36(53)54)30(46-31)16-32(41)45-29/h13-16,23-24,44-45H,3-12,17-18H2,1-2H3,(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)(H,61,62)" -"MNXM2449","InChI=1S/C5H8O4/c1-3(7)5(9)4(8)2-6/h4,6,8H,2H2,1H3" -"MNXM6359","InChI=1S/C5H6O3/c1-3-5(7)4(6)2-8-3/h7H,2H2,1H3" -"MNXM423","InChI=1S/C10H15N4O14P3/c15-6-4(1-25-30(21,22)28-31(23,24)27-29(18,19)20)26-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,21,22)(H,23,24)(H,11,12,17)(H2,18,19,20)" -"MNXM817","InChI=1S/C7H14N2O3/c1-5(10)9-6(7(11)12)3-2-4-8/h6H,2-4,8H2,1H3,(H,9,10)(H,11,12)" -"MNXM1119","InChI=1S/C6H13NO2S/c1-10(2)4-3-5(7)6(8)9/h5H,3-4,7H2,1-2H3/p+1" -"MNXM821","InChI=1S/C3H6O/c1-2-3-4/h3H,2H2,1H3" -"MNXM412","InChI=1S/C8H14N2O5S/c9-4(7(12)13)1-2-6(11)10-5(3-16)8(14)15/h4-5,16H,1-3,9H2,(H,10,11)(H,12,13)(H,14,15)" -"MNXM541","InChI=1S/C3H5O7P/c4-2(3(5)6)1-10-11(7,8)9/h1H2,(H,5,6)(H2,7,8,9)" +"MNXM481","InChI=1S/C21H35N7O13P2S/c1-21(2,16(32)19(33)24-4-3-12(29)23-5-6-44)8-39-43(36,37)41-42(34,35)38-7-11-14(30)15(31)20(40-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-32,44H,3-8H2,1-2H3,(H,23,29)(H,24,33)(H,34,35)(H,36,37)(H2,22,25,26)" +"MNXM1178","InChI=1S/C9H17N4O9P/c10-5-7(12-9(18)13-8(5)17)11-1-3(14)6(16)4(15)2-22-23(19,20)21/h3-4,6,14-16H,1-2,10H2,(H2,19,20,21)(H3,11,12,13,17,18)" +"MNXM2323","InChI=1S/C4H9O6P/c1-3(5)4(6)2-10-11(7,8)9/h4,6H,2H2,1H3,(H2,7,8,9)" +"MNXM1313","InChI=1S/C13H18N4O6/c1-5-6(2)17(3-7(19)10(21)8(20)4-18)11-9(14-5)12(22)16-13(23)15-11/h7-8,10,18-21H,3-4H2,1-2H3,(H,16,22,23)" +"MNXM791","InChI=1S/C9H16N4O6/c10-5-7(12-9(19)13-8(5)18)11-1-3(15)6(17)4(16)2-14/h3-4,6,14-17H,1-2,10H2,(H3,11,12,13,18,19)" +"MNXM270","InChI=1S/C17H20N4O6/c1-7-3-9-10(4-8(7)2)21(5-11(23)14(25)12(24)6-22)15-13(18-9)16(26)20-17(27)19-15/h3-4,11-12,14,22-25H,5-6H2,1-2H3,(H,20,26,27)" +"MNXM397","InChI=1S/C9H16N5O13P3/c10-9-13-7-5(8(17)14-9)12-3(1-11-7)6(16)4(15)2-25-29(21,22)27-30(23,24)26-28(18,19)20/h4,6,15-16H,1-2H2,(H,21,22)(H,23,24)(H2,18,19,20)(H4,10,11,13,14,17)" +"MNXM162359","InChI=1S/C9H13N5O4/c10-9-13-7-5(8(18)14-9)12-3(1-11-7)6(17)4(16)2-15/h4,6,15-17H,1-2H2,(H4,10,11,13,14,18)" +"MNXM91459","InChI=1S/C7H11N5O8P2/c8-7-11-5-4(6(13)12-7)10-3(1-9-5)2-19-22(17,18)20-21(14,15)16/h1-2H2,(H,17,18)(H2,14,15,16)(H4,8,9,11,12,13)" +"MNXM27","InChI=1S/Na/q+1" +"MNXM421","InChI=1S/C7H7NO2/c8-6-3-1-5(2-4-6)7(9)10/h1-4H,8H2,(H,9,10)" +"MNXM1458","InChI=1S/C10H11NO5/c1-5(9(12)13)16-8-4-6(10(14)15)2-3-7(8)11/h2-4,7-8H,1,11H2,(H,12,13)(H,14,15)" +"MNXM1572","InChI=1S/C4H6O4/c1-2(3(5)6)4(7)8/h2H,1H3,(H,5,6)(H,7,8)" +"MNXM722728","InChI=1S/C14H14N6O3/c15-14-19-11-10(12(21)20-14)18-9(6-17-11)5-16-8-3-1-7(2-4-8)13(22)23/h1-4,16H,5-6H2,(H,22,23)(H4,15,17,19,20,21)" +"MNXM281","InChI=1S/C19H21N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,12,21H,5-8H2,(H,24,29)(H,27,28)(H,31,32)(H4,20,22,25,26,30)" +"MNXM617","InChI=1S/C19H19N7O6/c20-19-25-15-14(17(30)26-19)23-11(8-22-15)7-21-10-3-1-9(2-4-10)16(29)24-12(18(31)32)5-6-13(27)28/h1-4,8,12,21H,5-7H2,(H,24,29)(H,27,28)(H,31,32)(H3,20,22,25,26,30)" +"MNXM511","InChI=1S/C20H21N7O6/c21-20-24-16-15(18(31)25-20)27-9-26(8-12(27)7-22-16)11-3-1-10(2-4-11)17(30)23-13(19(32)33)5-6-14(28)29/h1-4,9,12-13H,5-8H2,(H6-,21,22,23,24,25,28,29,30,31,32,33)/p+1" +"MNXM799","InChI=1S/C10H10O6/c1-5(9(12)13)16-7-4-2-3-6(8(7)11)10(14)15/h2-4,7-8,11H,1H2,(H,12,13)(H,14,15)" +"MNXM811","InChI=1S/C40H68O7P2/c1-33(2)17-10-18-34(3)19-11-20-35(4)21-12-22-36(5)23-13-24-37(6)25-14-26-38(7)27-15-28-39(8)29-16-30-40(9)31-32-46-49(44,45)47-48(41,42)43/h17,19,21,23,25,27,29,31H,10-16,18,20,22,24,26,28,30,32H2,1-9H3,(H,44,45)(H2,41,42,43)" +"MNXM1899","InChI=1S/C48H74O3/c1-36(2)19-12-20-37(3)21-13-22-38(4)23-14-24-39(5)25-15-26-40(6)27-16-28-41(7)29-17-30-42(8)31-18-32-43(9)33-34-45-44(10)46(49)35-47(51-11)48(45)50/h19,21,23,25,27,29,31,33,35,49-50H,12-18,20,22,24,26,28,30,32,34H2,1-11H3" +"MNXM2187","InChI=1S/C48H74O4/c1-35(2)19-12-20-36(3)21-13-22-37(4)23-14-24-38(5)25-15-26-39(6)27-16-28-40(7)29-17-30-41(8)31-18-32-42(9)33-34-44-43(10)45(49)47(51)48(52-11)46(44)50/h19,21,23,25,27,29,31,33,49-51H,12-18,20,22,24,26,28,30,32,34H2,1-11H3" +"MNXM1249","InChI=1S/C11H12O6/c12-7(4-5-9(14)15)6-2-1-3-8(13)10(6)11(16)17/h1-3,8,10,13H,4-5H2,(H,14,15)(H,16,17)" +"MNXM1212","InChI=1S/C11H10O5/c12-9(5-6-10(13)14)7-3-1-2-4-8(7)11(15)16/h1-4H,5-6H2,(H,13,14)(H,15,16)" +"MNXM1132","InChI=1S/C32H44N7O20P3S/c1-32(2,26(44)29(45)35-10-9-21(41)34-11-12-63-22(42)8-7-19(40)17-5-3-4-6-18(17)31(46)47)14-56-62(53,54)59-61(51,52)55-13-20-25(58-60(48,49)50)24(43)30(57-20)39-16-38-23-27(33)36-15-37-28(23)39/h3-6,15-16,20,24-26,30,43-44H,7-14H2,1-2H3,(H,34,41)(H,35,45)(H,46,47)(H,51,52)(H,53,54)(H2,33,36,37)(H2,48,49,50)" +"MNXM552","InChI=1S/C11H8O4/c12-9-5-8(11(14)15)10(13)7-4-2-1-3-6(7)9/h1-5,12-13H,(H,14,15)" +"MNXM933","InChI=1S/C4H6O3/c1-3(2-5)4(6)7/h2-3H,1H3,(H,6,7)" +"MNXM34810","InChI=1S/C21H44NO7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-21(24)29-20(18-23)19-28-30(25,26)27-17-16-22/h20,23H,2-19,22H2,1H3,(H,25,26)" +"MNXM45654","InChI=1S/C73H142O17P2/c1-5-9-13-17-21-25-29-33-37-41-45-49-53-57-70(75)83-63-68(89-72(77)59-55-51-47-43-39-35-31-27-23-19-15-11-7-3)65-87-91(79,80)85-61-67(74)62-86-92(81,82)88-66-69(90-73(78)60-56-52-48-44-40-36-32-28-24-20-16-12-8-4)64-84-71(76)58-54-50-46-42-38-34-30-26-22-18-14-10-6-2/h67-69,74H,5-66H2,1-4H3,(H,79,80)(H,81,82)" +"MNXM1705","InChI=1S/C14H22N4O8P2S/c1-8-12(4-5-25-28(23,24)26-27(20,21)22)29-14(9(2)19)18(8)7-11-6-16-10(3)17-13(11)15/h6,9,19H,4-5,7H2,1-3H3,(H4-,15,16,17,20,21,22,23,24)/p+1" +"MNXM2563","InChI=1S/C29H37N9O12/c30-29-37-23-22(25(44)38-29)33-15(12-32-23)11-31-14-3-1-13(2-4-14)24(43)36-18(28(49)50)6-9-20(40)34-16(26(45)46)5-8-19(39)35-17(27(47)48)7-10-21(41)42/h1-4,15-18,31,33H,5-12H2,(H,34,40)(H,35,39)(H,36,43)(H,41,42)(H,45,46)(H,47,48)(H,49,50)(H4,30,32,37,38,44)" +"MNXM2623","InChI=1S/C30H39N9O12/c1-39-16(13-33-24-23(39)26(45)38-30(31)37-24)12-32-15-4-2-14(3-5-15)25(44)36-19(29(50)51)7-10-21(41)34-17(27(46)47)6-9-20(40)35-18(28(48)49)8-11-22(42)43/h2-5,16-19,32H,6-13H2,1H3,(H,34,41)(H,35,40)(H,36,44)(H,42,43)(H,46,47)(H,48,49)(H,50,51)(H4,31,33,37,38,45)" "MNXM379","InChI=1S/C3H8NO6P/c4-2(3(5)6)1-10-11(7,8)9/h2H,1,4H2,(H,5,6)(H2,7,8,9)" -"MNXM124","InChI=1S/C7H19N3/c8-4-1-2-6-10-7-3-5-9/h10H,1-9H2" -"MNXM989","InChI=1S/C8H14O8/c9-2-5(12)7(14)6(13)3(10)1-4(11)8(15)16/h3,5-7,9-10,12-14H,1-2H2,(H,15,16)" -"MNXM1514","InChI=1S/C4H7O8P/c5-2(3(6)4(7)8)1-12-13(9,10)11/h2,5H,1H2,(H,7,8)(H2,9,10,11)" -"MNXM744","InChI=1S/C6H10O8/c7-1(3(9)5(11)12)2(8)4(10)6(13)14/h1-4,7-10H,(H,11,12)(H,13,14)" -"MNXM7481","InChI=1S/C7H12N2O3/c10-6(11)4-9-7(12)5-2-1-3-8-5/h5,8H,1-4H2,(H,9,12)(H,10,11)" -"MNXM75103","InChI=1S/C38H72O13P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-37(40)47-33-36(34-50-53(45,46)49-32-35(39)31-48-52(42,43)44)51-38(41)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h13-16,35-36,39H,3-12,17-34H2,1-2H3,(H,45,46)(H2,42,43,44)" -"MNXM1763","InChI=1S/C9H13NO6/c11-5-1-2-6(9(15)16)10-7(12)3-4-8(13)14/h5-6H,1-4H2,(H,10,12)(H,13,14)(H,15,16)" -"MNXM90003","InChI=1S/C5H12NO7P/c6-5-4(8)3(7)2(13-5)1-12-14(9,10)11/h2-5,7-8H,1,6H2,(H2,9,10,11)" -"MNXM1630","InChI=1S/C2H6O4S/c3-1-2-7(4,5)6/h3H,1-2H2,(H,4,5,6)" -"MNXM1043","InChI=1S/C10H20O2/c1-2-3-4-5-6-7-8-9-10(11)12/h2-9H2,1H3,(H,11,12)" -"MNXM287","InChI=1S/C10H14N5O10PS/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-26(18,19)25-27(20,21)22/h2-4,6-7,10,16-17H,1H2,(H,18,19)(H2,11,12,13)(H,20,21,22)" -"MNXM672","InChI=1S/C42H48N4O16/c1-41(17-39(59)60)23(5-9-35(51)52)29-14-27-21(11-37(55)56)19(3-7-33(47)48)25(43-27)13-26-20(4-8-34(49)50)22(12-38(57)58)28(44-26)15-31-42(2,18-40(61)62)24(6-10-36(53)54)30(46-31)16-32(41)45-29/h14-16,23-24,43-45H,3-13,17-18H2,1-2H3,(H,47,48)(H,49,50)(H,51,52)(H,53,54)(H,55,56)(H,57,58)(H,59,60)(H,61,62)" -"MNXM227","InChI=1S/C11H19NO9/c1-4(14)12-7-5(15)2-11(20,10(18)19)21-9(7)8(17)6(16)3-13/h5-9,13,15-17,20H,2-3H2,1H3,(H,12,14)(H,18,19)" -"MNXM2403","InChI=1S/C8H15NO6/c1-4(12)9-5(2-10)7(14)8(15)6(13)3-11/h2,5-8,11,13-15H,3H2,1H3,(H,9,12)" -"MNXM730","InChI=1S/C7H11NO5/c1-4(9)8-5(7(12)13)2-3-6(10)11/h5H,2-3H2,1H3,(H,8,9)(H,10,11)(H,12,13)" -"MNXM1954","InChI=1S/C41H65N9O28P2/c1-15(32(58)45-17(3)37(62)63)44-35(61)21(8-6-7-20(42)38(64)65)47-25(53)10-9-22(39(66)67)48-33(59)16(2)43-34(60)18(4)74-31-27(46-19(5)52)40(76-23(13-51)29(31)56)77-80(71,72)78-79(69,70)73-14-24-28(55)30(57)36(75-24)50-12-11-26(54)49-41(50)68/h11-12,15-18,20-24,27-31,36,40,51,55-57H,6-10,13-14,42H2,1-5H3,(H,43,60)(H,44,61)(H,45,58)(H,46,52)(H,47,53)(H,48,59)(H,62,63)(H,64,65)(H,66,67)(H,69,70)(H,71,72)(H,49,54,68)" -"MNXM1608","InChI=1S/C4H6O5/c5-2(4(8)9)1-3(6)7/h2,5H,1H2,(H,6,7)(H,8,9)" -"MNXM1329","InChI=1S/C17H34N6O5S/c18-6-1-2-7-20-8-3-9-21-15(25)10-22-16(26)13(11-29)23-14(24)5-4-12(19)17(27)28/h12-13,20,29H,1-11,18-19H2,(H,21,25)(H,22,26)(H,23,24)(H,27,28)" -"MNXM1407","InChI=1S/C4H9O8P/c5-2(3(6)4(7)8)1-12-13(9,10)11/h2-3,5-6H,1H2,(H,7,8)(H2,9,10,11)" -"MNXM1734","InChI=1S/C6H12O7/c7-1-2(8)3(9)4(10)5(11)6(12)13/h2-5,7-11H,1H2,(H,12,13)" -"MNXM1750","InChI=1S/C6H12O5/c1-3(8)5(10)6(11)4(9)2-7/h3,5-8,10-11H,2H2,1H3" -"MNXM1403","InChI=1S/C9H10O2/c10-9(11)7-6-8-4-2-1-3-5-8/h1-5H,6-7H2,(H,10,11)" -"MNXM2112","InChI=1S/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)" -"MNXM608","InChI=1S/C25H40N7O19P3S/c1-12(23(37)38)24(39)55-7-6-27-14(33)4-5-28-21(36)18(35)25(2,3)9-48-54(45,46)51-53(43,44)47-8-13-17(50-52(40,41)42)16(34)22(49-13)32-11-31-15-19(26)29-10-30-20(15)32/h10-13,16-18,22,34-35H,4-9H2,1-3H3,(H,27,33)(H,28,36)(H,37,38)(H,43,44)(H,45,46)(H2,26,29,30)(H2,40,41,42)" -"MNXM114390","InChI=1S/C13H19N6O9P/c14-5(1-20)13(23)28-29(24,25)26-2-6-8(21)9(22)12(27-6)19-4-18-7-10(15)16-3-17-11(7)19/h3-6,8-9,12,20-22H,1-2,14H2,(H,24,25)(H2,15,16,17)" -"MNXM1482","InChI=1S/C6H12N3O4P/c7-5(3-13-14(10,11)12)1-6-2-8-4-9-6/h2,4-5H,1,3,7H2,(H,8,9)(H2,10,11,12)" -"MNXM1922","InChI=1S/C10H13N4O7P/c15-5-1-7(21-6(5)2-20-22(17,18)19)14-4-13-8-9(14)11-3-12-10(8)16/h3-7,15H,1-2H2,(H,11,12,16)(H2,17,18,19)" -"MNXM435","InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2" -"MNXM4232","InChI=1S/C15H31O7P/c1-2-3-4-5-6-7-8-9-10-11-15(17)21-12-14(16)13-22-23(18,19)20/h14,16H,2-13H2,1H3,(H2,18,19,20)" -"MNXM154","InChI=1S/C4H6O3/c1-3(5)2-4(6)7/h2H2,1H3,(H,6,7)" -"MNXM1886","InChI=1S/C46H70O/c1-37(2)19-12-20-38(3)21-13-22-39(4)23-14-24-40(5)25-15-26-41(6)27-16-28-42(7)29-17-30-43(8)31-18-32-44(9)35-36-45-33-10-11-34-46(45)47/h10-11,19,21,23,25,27,29,31,33-35,47H,12-18,20,22,24,26,28,30,32,36H2,1-9H3" -"MNXM1870","InChI=1S/C96H176N2O38P2/c1-6-11-16-21-26-31-36-41-46-51-66(101)56-76(107)97-81-89(130-79(110)57-67(102)52-47-42-37-32-27-22-17-12-7-2)85(114)74(128-92(81)136-138(122,123)124)64-125-91-82(98-77(108)59-69(54-49-44-39-34-29-24-19-14-9-4)127-78(109)55-50-45-40-35-30-25-20-15-10-5)90(131-80(111)58-68(103)53-48-43-38-33-28-23-18-13-8-3)88(135-137(119,120)121)75(129-91)65-126-95(93(115)116)61-73(84(113)87(133-95)72(106)63-100)132-96(94(117)118)60-70(104)83(112)86(134-96)71(105)62-99/h66-75,81-92,99-106,112-114H,6-65H2,1-5H3,(H,97,107)(H,98,108)(H,115,116)(H,117,118)(H2,119,120,121)(H2,122,123,124)" -"MNXM1080","InChI=1S/C6H10O8/c7-1(3(9)5(11)12)2(8)4(10)6(13)14/h1-4,7-10H,(H,11,12)(H,13,14)" -"MNXM1334","InChI=1S/C4H10NO6P/c5-3(4(6)7)1-2-11-12(8,9)10/h3H,1-2,5H2,(H,6,7)(H2,8,9,10)" -"MNXM495","InChI=1S/C10H14N4O11P2/c15-6-4(1-23-27(21,22)25-26(18,19)20)24-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,21,22)(H,11,12,17)(H2,18,19,20)" -"MNXM309","InChI=1S/C21H26N6O15P2/c22-17-12-18(24-7-23-17)27(8-25-12)20-16(31)14(29)11(41-20)6-39-44(36,37)42-43(34,35)38-5-10-13(28)15(30)19(40-10)26-3-1-2-9(4-26)21(32)33/h1-4,7-8,10-11,13-16,19-20,28-31H,5-6H2,(H4-,22,23,24,32,33,34,35,36,37)/p+1" -"MNXM182","InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2" -"MNXM241","InChI=1S/C6H10O7/c7-1-2(8)4(5(10)11)13-6(12)3(1)9/h1-4,6-9,12H,(H,10,11)" +"MNXM469","InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2" +"MNXM533","InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2" +"MNXM48464","InChI=1S/C6H10O7/c7-1-2(8)4(5(10)11)13-6(12)3(1)9/h1-4,6-9,12H,(H,10,11)" +"MNXM6325","InChI=1S/C24H38N7O18P3S/c1-24(2,19(36)22(37)27-5-3-14(33)26-6-8-53-15(34)4-7-32)10-46-52(43,44)49-51(41,42)45-9-13-18(48-50(38,39)40)17(35)23(47-13)31-12-30-16-20(25)28-11-29-21(16)31/h7,11-13,17-19,23,35-36H,3-6,8-10H2,1-2H3,(H,26,33)(H,27,37)(H,41,42)(H,43,44)(H2,25,28,29)(H2,38,39,40)"