Mercurial > repos > tduigou > rpranker
changeset 2:ebbdb240c507 draft
planemo upload commit f40274f6b9f6a15eb4022aab21286d4c96cd8475-dirty
| author | tduigou |
|---|---|
| date | Fri, 21 Oct 2022 14:57:59 +0000 |
| parents | bab690866445 |
| children | 422a5c9f3583 |
| files | rpranker.xml |
| diffstat | 1 files changed, 9 insertions(+), 15 deletions(-) [+] |
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--- a/rpranker.xml Tue Feb 15 13:26:44 2022 +0000 +++ b/rpranker.xml Fri Oct 21 14:57:59 2022 +0000 @@ -1,7 +1,8 @@ -<tool id="rpranker" name="Rank Pathways" version="@TOOL_VERSION@"> +<tool id="rpranker" name="Rank Pathways" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.09"> <description>Rank heterologous pathways according to their global score</description> <macros> - <token name="@TOOL_VERSION@">5.12.1</token> + <token name="@VERSION_SUFFIX@">0</token> + <token name="@TOOL_VERSION@">5.13.1</token> </macros> <requirements> <requirement type="package" version="@TOOL_VERSION@">rptools</requirement> @@ -19,7 +20,7 @@ > '$sorted_pathways' ]]></command> <inputs> - <param name="pathway_collection" type="data_collection" format="xml" collection_type="list" label="Pathways" /> + <param name="pathway_collection" type="data_collection" format="sbml" collection_type="list" label="Pathways" /> </inputs> <outputs> <data name="sorted_pathways" format="csv" label="Ranked Pathways" /> @@ -54,37 +55,30 @@ Required: -* **pathways**\ : (list of string) Paths to pathway (rpSBML) files +* **Pathways**\ : List of pathway files (rpSBML) Output ------ -* **output**\ : (string) Sorted names and scores of pathways +* **Ranked Pathways**\ : Sorted names and scores of pathways Project Links ------------------ * `GitHub <https://github.com/brsynth/rptools/tree/master/rptools/rprank>`_ -Version ----------- - -5.12.1 - License ------- * `MIT <https://github.com/brsynth/rptools/blob/master/LICENSE>`_ -Authors -------- - -* **Joan Hérisson** - Acknowledgments --------------- * Thomas Duigou ]]></help> + <creator> + <person givenName="Joan" familyName="Hérisson" email="joan.herisson@univ-evry.fr" identifier="https://orcid.org/0000-0001-9741-0847" /> + </creator> </tool> \ No newline at end of file