diff rpreport.xml @ 2:432623008c84 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rptools commit 2333b7b56422febf439cd9f4cd3e6eda858b2690
author tduigou
date Tue, 28 Mar 2023 12:10:56 +0000
parents a1764894d6ca
children a03d4c0887cc
line wrap: on
line diff
--- a/rpreport.xml	Wed Nov 16 14:56:06 2022 +0000
+++ b/rpreport.xml	Tue Mar 28 12:10:56 2023 +0000
@@ -1,12 +1,9 @@
 <tool id="rptools_rpreport" name="Pathways HTML Report" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.09">
     <description>Explore the main characteristics of pathways predicted with RetroPath suite</description>
     <macros>
-        <token name="@VERSION_SUFFIX@">0</token>
-        <token name="@TOOL_VERSION@">5.13.1</token>
+        <import>macros.xml</import>
     </macros>
-    <requirements>
-        <requirement type="package" version="@TOOL_VERSION@">rptools</requirement>
-    </requirements>
+    <expand macro="requirements"/>
     <command detect_errors="exit_code"><![CDATA[
         #if str($input_type_conditional.input_type) == "sbml":
             #set input_folder="tmp_folder"
@@ -40,7 +37,7 @@
     </outputs>
     <tests>
         <test>
-        <!-- test 1: check if identical html output is produced (tar input) --> 
+        <!-- test 1: check if identical html output is produced (tar input) -->
             <conditional name="input_type_conditional">
                 <param name="input_type" value="tar"/>
                 <param name="input_tar" value="input_rpSBML.tar" />
@@ -68,24 +65,9 @@
 ------
 
 * **Pathways HTML Report**: Pathways HTML Report
-
-Project Links
----------------------
-
-* `GitHub <https://github.com/brsynth/rptools>`_
-
-Acknowledgments
----------------
-
-* Thomas Duigou
-* Joan Hérisson
-
-Licence
--------
-
-`MIT <https://github.com/brsynth/rptools/blob/master/LICENSE>`_
     ]]></help>
-    <creator>
-        <person givenName="Olivier" familyName="Telle" email="olivier.telle@inrae.fr" />
-    </creator>
+    <expand macro="creator"/>
+    <citations>
+        <citation type="doi">10.1038/s41467-022-32661-x</citation>
+    </citations>
 </tool>