Mercurial > repos > testtool > get_gr_set

comparison GRsetFromGEO/GRsetFromGEO.R @ 16:ceaf71c74547 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author testtool
date Thu, 29 Jun 2017 10:18:30 -0400
parents c3b28b232e64
children 3431c6054674
comparison
equal deleted inserted replaced
15:6c3be09de899 16:ceaf71c74547
2 2
3 options(warn = -1) 3 options(warn = -1)
4 options('download.file.method'='wget') 4 options('download.file.method'='wget')
5 5
6 args <- commandArgs(trailingOnly = TRUE) 6 args <- commandArgs(trailingOnly = TRUE)
7 GSE = args[1] 7 input = args[1]
8 output = args[2] 8 output = args[2]
9 9
10 GRset <- getGenomicRatioSetFromGEO(GSE) 10 GRset <- getGenomicRatioSetFromGEO(input)
11 11
12 save(GRset,file = output) 12 save(GRset,file = output)