view test-data/class_b1_b2.fasta @ 0:6f78bc71eb12 draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/fargene commit 2e1b1f737f3a3d7cfc6350c6936fbb0bd84a5dad-dirty
author thanhlv
date Fri, 19 Jul 2019 08:42:37 -0400
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>gi|560552|gb|AAB30289.1| IMP-1 [Serratia marcescens]
MSKLSVFFIFLFCSIATAAESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFT
AKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVN
YWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKL
VVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSN
>gi|5420399|emb|CAB46686.1| VIM-1 [Pseudomonas aeruginosa]
MLKVISSLLVYMTASVMAVASPLAHSGEPSGEYPTVNEIPVGEVRLYQIADGVWSHIATQSFDGAVYPSN
GLIVRDGDELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAAGVATYASPSTR
RLAEAEGNEIPTHSLEGLSSSGDAVRFGPVELFYPGAAHSTDNLVVYVPSANVLYGGCAVHELSSTSAGN
VADADLAEWPTSVERIQKHYPEAEVVIPGHGLPGGLDLLQHTANVVKAHKNRSVAE
>gi|255031063|emb|CAZ39946.1| NDM-1 [Klebsiella pneumoniae]
MELPNIMHPVAKLSTALAAALMLSGCMPGEIRPTIGQQMETGDQRFGDLVFRQLAPNVWQHTSYLDMPGF
GAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATY
ANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDGTDIAFGGCLI
KDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDSRAAITHTARMADKLR
>gi|24528423|emb|CAD37801.1| SPM-1 [Pseudomonas aeruginosa]
MNSPKSRALLGFMGAFCLLLVAGAPLSAKSSDHVDLPYNLTATKIDSDVFVVTDRDFYSSNVLVAKMLDG
TVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKKMGAETWSSDLTKQLRLEENK
KDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLL
FGGCMIKPKELGYLGDANVKAWPDSARRLKKFDAKIVIPGHGEWGGPEMVNKTIKVAEKAVGEMRL
>gi|42516779|emb|CAF05908.1| GIM-1 [Pseudomonas aeruginosa]
MKNVLVFLILLVALPALAQGHKPLEVIKIEDGVYLHTSFKNIEGYGLVDSNGLVVLDNNQAYIIDTPWSE
EDTKLLLSWATDRGYQVMASISTHSHEDRTAGIKLLNSKSIPTYTSELTKKLLAREGKPVPTHYFKDDEF
TLGNGLIELYYPGAGHTEDNIVAWLPKSKILFGGCLVRSHEWEGLGYVGDASISSWADSIKNIVSKKYPI
QMVVPGHGKVGSSDILDHTIDLAESASNKLMQPTAEASAD
>gi|62199049|gb|AAX76774.1| SIM-1 [Acinetobacter pittii]
MRTLLILCLFGTLNTAFAEEAQPDLKIEKIEEGIYLHTSFQEYKGFGIVKKQGLVVLDNHKAYLIDTPAS
AGDTEKLVNWLEKNDFTVNGSISTHFHDDSTAGIEWLNTKSIPTYASKLTNELLNKNGKTQAKHSFDKES
FWLVKNKIEIFYPGPGHTQDNEVVWIPNKKILFGGCFIKPNGLGNLSDANLEAWPGSAKKMISKYSKAKL
VIPSHSEIGDASLLKLTWEQAIKGLNESKSKPPLIN
>gi|222053115|dbj|BAH16555.1| KHM-1 [Citrobacter freundii]
MKIALVISFGLLLFTNMVCADDSLPELDIQKIEDGVYLYTAYEKIEGWGLVGSNGLVVLDNKNAYLIDTP
ISATDTEKLVKWIDAQGFTAKASISTHFHTDSTGGIAFLNSKSIPTYASKLTNQLLKNKGEEQATHSFGK
NPYWLLKNKIEAFYPGAGHTPDNLVVWLPKQKILFGGCFVKPEGLGNLSHAVIAEWPASAEKLIARYSNA
TMVVPGHGKVGDASLLEKTRQRAVEALAAKK
>gi|291278192|gb|ADD91577.1| DIM-1 [Pseudomonas stutzeri]
MRTHFTALLLLFSLSSLANDEVPELRIEKVKENIFLHTSYSRVNGFGLVSSNGLVVIDKGNAFIVDTPWS
DRDTETLVHWIRKNGYELLGSVSTHWHEDRTAGIKWLNDQSISTYATTSTNHLLKENKKEPAKYTLKGNE
STLVDGLIEVFYPGGGHTIDNVVVWLPKSKILFGGCFVRSLDSEGLGYTGEAHIDQWSRSAQNALSRYSE
AQIVIPGHGKIGDIALLKHTKSLAETASNKSIQPNANASAD
>gi|142604|gb|AAA22276.1| BcII pre-beta-lactamase II (EC 3.5.2.6) [Bacillus cereus]
MKKNTLLKVGLCVGLLGTIQFVSTISSVQASQKVEKTVIKNETGTISISQLNKNVWVHTELGSFNGEAVP
SNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTAL
TAELAKKNGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLVKSTSAKDLGN
VADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDKGLLLHTLDLLK
>gi|143932|gb|AAA22904.1| CcrA beta-lactamase [Bacteroides fragilis]
MKTVFILISMLFPVAVMAQKSVKISDDISITQLSDKVYTYVSLAEIEGWGMVPSNGMIVINNHQAALLDT
PINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAKEKGLPVPEHGF
TDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQATSIGNISDADVTAWPKTLDKVK
AKFPSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSKP
>gi|9587056|gb|AAF89154.1|AF189298_1 BlaB-1 [Elizabethkingia meningoseptica]
MLKKIKISLILALGLTSLQAFGQENPDVKIEKLKDNLYVYTTYNTFNGTKYAANAVYLVTDKGVVVIDCP
WGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGKIGAKTYSTKMTDSILAKENKPRAQYTFD
NNKSFKVGKSEFQVYYPGKGHTADNVVVWFPKEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQ
KFSGAQYVVAGHDDWKDQRSIQHTLDLINEYQQKQKASN
>gi|318066561|emb|CBY88906.1| TMB-1 [Achromobacter sp. sallbros1]
MRPFLFLIIFISHFAFANEEIPGLEVEEIDNGVFLHKSYSRVEGWGLVSSNGLVVISGGKAFIIDTPWSE
SDTEKLVDWIRSKKYELAGSISTHSHEDKTAGIKWLNGKSITTYASALTNEILKREGKEQARSSFKGNEF
SLMDGFLEVYYPGGGHTIDNLVVWIPSSKILYGGCFIRSLESSGLGYTGEAKIDQWPQSARNTISKYPEA
KIVVPGHGKIGDFELLKHTKVLAEKASNKANHGDR
>gi|410825529|gb|AFV91534.1| FIM-1 (possible acquired)[Pseudomonas aeruginosa]
MRPLPHSYLKSLVICLLTAFAALTPVVNSGVQAAQPKDVPVTFTAITQGVWMHTSMKHMENWGHVPSNGL
IVEKGDFSILVDTAWDDPQTAQIIEWSKDTLKKPIRWAVFTHAHDDKMGGVAALRQQGIVTYAAADSNRM
APQNGLTPAEHDLIFDSEHSTSVLHPLVIFDPGPGHTRDNIVVGLPEQGIVFGGCLIRPSGSTSLGNTAD
ADLAHWKTAVLAVAQRFAEAQQIIPSHGPMAGRELFELTAQLAEKASIPSTP
>gi|23451048|gb|AAN32638.1|AF416700_1 EBR-1 [Empedobacter brevis]
MKKLFSLIALIGSFAFGQIKPIQIDPINNNLFVYQTFNSFNGVEYNANGMYLVTNKGIVLFDVPWQKSQY
QELNDMLQEKYNLPVIAVFATHSHDDRAGDLSFYNELNIPTYATSLTNSKLKKEGKATSKFEIELGKTYK
FGNEKFVFEYFGEGHTSDNVVVWFPKYKVLNGGCLIKGADAVNLGYTGEANVVEWPKTVHKLVAKHPTIK
QVIPGHDNWKATGHIENTFKLLEKK
>gi|19879250|gb|AAK38324.1| JOHN-1 [Flavobacterium johnsoniae UW101]
MRKLASIILFLAAVSNSLGQSKNSPLQISHLTGDFYVYRTFNDYKGTKISANAMYVVTDKGVVLFDAPWD
KTQFQPLLDSIKAKHNKEVVMLFGTHSHEDRAGGFDFYKKKGIKTYSIKLTDDILKKNKEPRAEFIISND
TTFTVGNHTFEVYYPGKGHAPDNIVAWFKKEKILYGGCFVKSAEALDLGYLGDADVKEWQKSIKKVQAKF
KKPDYIISGHDDWTSKESLNHTLKLVDEYLAQKSAGKK
>gi|18001153|gb|AAL55263.1|AF339734_1 CGB-1 [Chryseobacterium gleum]
MKKSIPFFIISMLLSPLANAQDTQVRDFVIEPQIQPNFYIYKTFGVFGGKEYSTNAVYLVTKKGVVLFDV
PWQKTQYQSLMDTIQKRHHLPVIAVFATHSHEDRAGDLSFYNKKGIKTYATAKTNEILKKEGKATSTEII
KTGKPYRIGGEEFVVDFLGEGHTADNVVVWFPKYKILDGGCLVKSKAAADLGYTGEANVAQWPKTMEKLK
SKYAQATLIIPGHDEWKGGGHVEHTLDLLNKK
>gi|24637303|gb|AAN63647.1|AF441286_1 MUS-1 [Myroides odoratimimus]
MHRILSVITMLICTTLVHAQSDKLKIKQLNDNMYIYTTYQEFQGVTYSSNSMYVLTDEGVILIDTPWDKD
QYEPLLEYIRSNHNKEVKWVITTHFHEDRSGGLGYFNSIGAQTYTYALTNEILKERNEPQAQHSFNKEKQ
FTFGNEKLAVYFLGEGHSLDNTVVWFPKEEVLYGGCLIKSAEATTIGNIADGNVIAWPKTIEAVKQKFKN
AKVIIPGHDEWDMTGHIENTERILSAYNQQHSTKND
>MYO-1
MKILLAFFLLSSLTFISCKESSSNHNQANQENKKEIINKPLTDSLIVYQTENLIINKLSNHIYEHISFLNTDDFGKVACNGMLVLNENKVVVFDTPTDDKSSLELINFVTNTLKSEIIGLIPTHFHDDCIGGITEFENHNIQTYVSKETIELLKDNGQEFSNPTKDFDNSLTLDIGNKKVYAEYFGEGHTKDNVVGYFPEDNAVFGGCLIKEIDASKGYLGDANIKEWSTTVEKVKLKYPNAKIVIPGHGKWGGIELFDYTIKLFE
>SHD-1
MMLNLVRKVFTTGPRVLSVVSLLSVNVLGINLAQAVTSEESVPKFSIEPLANNVYLHQSFQQTESFGLVGANGLVVINEGKAFIVDTPWSESDTAVLVDWIKEQGYQLVGSVSTHSHEDRTAGIGWLNAHSIPTFASELTNQILKESEKPLASHPFALPQASLFDGQLEAFYPGGGHALDNLVVWLPKSNILFGGCLVRSLDSTSLGYTGEAVLEQWPTSAMKVLAKFPDVELVVPGHGEPGDKQLLIHTKALAESGAKQASAK*
>SPS-1
MLIIFFVLTDLSLIAQTQPEYPVIRLNDELEVREILPNAFVITHKFPWGGNSLVVLIGEKYAVFVDTPYTPEATENVLDWINKQYGNRQFIEINTGYHVDNLGGNDALLHRNIPIIGSDKTVSLLRERGEATRQLTMGWLEGPGNEKFLKRHETIPYVGPSQIFQLTEGYHFTVGDEPIEVFFPGETHAPDNIVVYFPERKILFGGCMLRVGNGTGNRADANMDTWKSSVERLRDFDCVAVIPGHGIRFDPGVIENTISVLP*
>MYX-1
MTLFPLRWFCAGALLITLSTACTRSTPAATVERNIPVKAQSQGPDEYVLADDVSVRKLAPGVWLHITVVTLEPFGRVSTNGLIIEDGETSLLVDTGWDARQGALLLDWARDTLRRPVRAAVVTHFHEDRLGGVPALAPHGIPVHGLEETARIATSLGLPGPTETFAKTSTVDSLELFFPGAGHAKDNIVVWHRDSGVLFGGCFVKDGASTNLGNVADADVAAWPASLSRTRQRFPEARVVVPGHGQPGGPELLGHTEALLR*
>STA-1
MHPPLRPHPLWCSLRPATLALLLGVFGCRTSVPAPRPAAEPFTSITEDLRIQPLAPGVWRLVALSGEEWGHIPANGLVIAEGGGVLLVDPGWTEAQGERLLQWVEDTLKVPVHAGVATHFHADRTGGLRALQARGIPTHALALTAALTSQQDRPAPTHLFPGPAQQLGPVELFFPGPGHAPDNITVWHAASGILFGGCMVKDLKASSLGNLSDADLASWPRSVESLQARYPAARTVIPGHGEPGDTSLLAHTLELLRAGSR*
>ANA-1
LRMRTLLARVVVLLLVPWSAARGEPETDLGDRVRARPLSAHAWLIRSVSALEGFGDVESNAVLVTGATESVLVDTPATDEQTAPVLAWAEKTLRRPVRHLIVTHWHADRMGGIGAARARQVATYAFGRTRALARQKGLVVPEHELGPAERLTLAGLSLATWYPGHGHTADNIVVWLPEDGVLVAGCFVKDAAAGTLGNVREADPVQWATGVAALRRRYPGARIVVPGHGAAGGSELLARTTALLEAHGSRGVPASGR*
>ECV-1
MYYSLLISAFLLSISACGGKSEKLQEHLVAEQTSTFTEKEVYSSDKLIIKQVSPHTYVHVSFLDTDTFGKVACNGMIVISDGEAVVFDTPSTSNETSELLSFLEEEKLQVNAVVATHFHLDCLGGLEAFHARNIPSYAFKNTLSLASQHDFPQPQKGFSDELTLKVGTKAVFVHYFGEGHTQDNVIGYFPDDQVLFGGCLIKANGAGKGNLEDANVEAWPVTVNKISTAYPNLRLVIPGHGNWGDKTLLHYTETLFK*
>ORR-1
MLKKNFKPLFFYLCFWMSLAACQSQSFGGLQFPKIVYQSEDLKVVQIAPDTFVHTSYLATQQWGKVPCNGMIVRHQREAMVFDTPTDEASSEALIHWIKNELKAEIKWVVPTHFHDDNLGGLPAFHRDKIMSIAYYRTQNLSKKHRKPQTITTFSATDSTWNLGGAKIQIGYYGKGHTEDNIVVYFPKDQVLFGGCLVKELGAGKGNLSDAFPKEWSATIQKVKHAYPEAKIVVPGHGKIGDKALLDYTAQLFKP*
>FIA-1
MPHPMRFLFILLASTLFTHLAVAQAAQKPPLRVSRLSDRVFVHTTYGMYQGEPVPSNGLIVRTDDGVVLLDTGWDTEGNTDNTRQLLRWVADSLRLPVRLCIVTHSHDDKVGGIVELQKAGIRVVSTPLTAQKTVKQGYPSPDGILPADTTFTIGNVPIRTYFPGEGHTVDNIVVWLPSERILHGGCFVKSVAAFGMGYVGESNLTAWSGSIRNVKKRFGNARIVVPGHEEWTGPQALDHTLRLLEKYNANRH*
>ZOG-1
MTYKSTVLLLFLITAFFSCKSQQPTLTYSSEDLKIIPLSKNSFVHISYLSTGDFGKVACNGLIYINQGQAVVFDTPTDNETSEELIHWITETKKQQIKAVVINHFHDDCLGGIEAFHELSIPSYASNTTIELAKKEGNPVPQIGFDTTNELTIGKQKIINRHFGEAHTKDNIVSYIPSEHLLFGGCALKSLNAAKGYLGDANTNEWGNTIKKIKAAYPDLKTAIPGHGEYGGSELLDYTISLFSTKQ
>TTU-1
MRVFLVIFILFIAGDLCAGEEMPGFSVEEIEKNVFLHGSYSQVNGFGLVSSNGLVVIENKKAFIVDTPWSEKDTINLVQWIEGRNLVLIGSISTHSHEDRTAGIKWLNAHSIPTYASALTNELLKKDDKEVATKSFEGAELMLADGLIEAYYPGGGHTIDNIVVWLPKSQILFGGCLVRSVDSTGLGYVGEADIKNWSSSVENVLSKYPEIKAVVPGHGKIGGLSLLTHTKKLAISALPKLSN*
>PST-1
MKLLFAALFVVMFCGLARASDSLPELRIEKIAEGVYLHTSFQQVQGYGLVDANGLVVLDGQGAYIIDTPWSERDTAALVAWLQERNYQVKASVSTHFHDDRTAGIEYLNAISVPTYASARTNALLKQNGKALATETFDDAPLWLLEGKVEVFYPGAGHSVDNLVVWLPEQKLLNGGCFVRAAAAGTLGNTADAVVSEWAASAERLQRRYPDAQLVIPGHGVPGDVSLLEHTRKLALAATAKD*
>SHN-1
MRFILCLLLMVSSLTYAAQGPSKLKIVQLSDIVYQHTSLSDGDAYGVMAANGLIVIVGKQAYLIDTPWTEADTNTLIQWVTVKGLTIGGVIVTHFHQDSSGGLAVLNKLKINTYATTLTNQLLKANNREPASNEITSETFDLVPGVIQAYYPGAGHTQDNLVVWLAKSNLLFGGCLVQSFNNRKLLNIEDASIKDWPKSLQNVMVKYPNIDMVIPGHGQIGDVSLLELTQQLARKAL*
>Pedo-3
MRYLLSFLLCLSAFASFAQNPKIKIKHLTGDLYVYTTYNTYKGALTDANAVYLVTNKGVVVIDAPWDATQFQPFLDSIQT                                                                        
KHHQKVVLAIATHSHGDRAGGLAFFKSKGIKTYTNKLTDEILKTNKEPRAAYTFTNDTTFTVGQYKINTYYAGKGHTKDN                                                                        
LVVWFPKDKVLFGGCLIKSIEANDLGYIGESDLAAWPKSIEKLKQKYPDTKIVITGHAAWGNRESLDHTLKLLREKK
>ERY-1                                                       
MIARVLALAAALALPACVPGEIRSSVAEQEADRDIIRFGEVSFSQLAEGVWMHTTYLDLMGFGPIPSNGLLVVNGDNTIL                                                                        
VDTAWTDEQTEQIVAWASMVLAKPVRAAVVTHAHQDKMGGMAALHGANIATWAHPLSNELAPEEGLVPARNAITFDANGW                                                                        
ATGEAAQSLAPLRLYYPGGAHTRDNITVGLPELGIAFGGCMIKAGDASNLGNLADADTAAYAQSVRNFAAAFPDARTIAM                                                                        
SHSPPEGRKAIERTLDLAEEL
>ALI-1
MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYREFKNLQSPKKPILVDANSLVYVDGKDAYLIDTPWN                                                                        
ASNMPQLMTWIENRGLTLKKTVFSHFHEDQTGGLEYLQEHHFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEV                                                                        
FYPGGGHTKDNAVVWLPKEKVLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQANFVVPGHGNVGEGTSIISH                                                                        
TVDITGKX
>gi|38824|emb|CAA40386.1| CphA subclass-B2 [Aeromonas hydrophila]
MMKGWMKCGLAGAVVLMASFWGGSVRAAGMSLTQVSGPVYVVEDNYYVQENSMVYFGAKGVTVVGATWTP
DTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSIGAKVVSTRQTRDLMKSDWAEIVAFTRKGLP
EYPDLPLVLPNVVHDGDFTLQEGKVRAFYAGPAHTPDGIFVYFPDEQVLYGNCILKEKLGNLSFADVKAY
PQTLERLKAMKLPIKTVIGGHDSPLHGPELIDHYEALIKAAPQS
>gi|6456729|gb|AAF09244.1|AF197943_1 Sfh-1 subclass-B2 [Serratia fonticola]
MASEKNLTLTHFKGPLYIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVIN
TNYHTDRAGGNAYWKTLGAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNG
SIRAMYLGEAHTKDGIFVYFPAERVLYGNCILKENLGNMSFANRTEYPKTLEKLKGLIEQGELKVDSIIA
GHDTPIHDVGLIDHYLTLLEKAPK