Mercurial > repos > thomaswollmann > color_deconvolution

comparison color-deconvolution.xml @ 2:8fcbcf6509d8 draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/color-deconvolution commit 92068c64f9a6c3cf59f756b9efc2d561196c6873
author thomaswollmann
date Thu, 09 Feb 2017 04:36:37 -0500
parents e5d95eb1daad
children 3006ce5f7a7d
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1:e5d95eb1daad 2:8fcbcf6509d8
1 <tool id="color_deconvolution" name="Color Deconvolution" version="0.3"> 1 <tool id="color_deconvolution" name="Color Deconvolution" version="0.4">
2 <description>Color deconvolution</description> 2 <description>Color deconvolution</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.12.3" >scikit-image</requirement> 4 <requirement type="package" version="0.12.3" >scikit-image</requirement>
5 <requirement type="package" version="4.0.0">pillow</requirement> 5 <requirement type="package" version="4.0.0">pillow</requirement>
6 <requirement type="package" version="0.18.1">scikit-learn</requirement> 6 <requirement type="package" version="0.18.1">scikit-learn</requirement>
12 ]]> 12 ]]>
13 </command> 13 </command>
14 <inputs> 14 <inputs>
15 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Image file with 3 channels"/> 15 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Image file with 3 channels"/>
16 <param name="convtype" type="select" label="Transformation type"> 16 <param name="convtype" type="select" label="Transformation type">
17 <option value="pca" selected="True">pca</option> 17 <option value="ica" selected="True">ica</option>
18 <option value="pca">pca</option>
19 <option value="nmf">nmf</option>
20 <option value="fa">fa</option>
18 <option value="xyz2rgb">xyz2rgb</option> 21 <option value="xyz2rgb">xyz2rgb</option>
19 <option value="rgb_from_rbd">rgb_from_rbd</option> 22 <option value="rgb_from_rbd">rgb_from_rbd</option>
20 <option value="rgb_from_hdx">rgb_from_hdx</option> 23 <option value="rgb_from_hdx">rgb_from_hdx</option>
21 <option value="rgb2hsv">rgb2hsv</option> 24 <option value="rgb2hsv">rgb2hsv</option>
22 <option value="rgb_from_bro">rgb_from_bro</option> 25 <option value="rgb_from_bro">rgb_from_bro</option>