Mercurial > repos > thomaswollmann > labelimage2points
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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/labelimage2points/ commit a0ba841e8b3aee770a3243155bedfac0adf9a5a6
author | thomaswollmann |
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date | Wed, 12 Dec 2018 04:38:34 -0500 |
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<tool id="labelimage2points" name="Label 2 Points" version="0.1"> <description>Converts label image to points.</description> <requirements> <requirement type="package" version="0.12.3" >scikit-image</requirement> <requirement type="package" version="0.21.0" >pandas</requirement> </requirements> <command> <![CDATA[ python '$__tool_directory__/labelimage2points.py' '$input' '$output' ]]> </command> <inputs> <param name="input" type="data" format="tiff,png,jpg,bmp" label="Label image file"/> </inputs> <outputs> <data format="csv" name="output"/> </outputs> <tests> <test> <param name="input" value="label.tif" /> <output name="output" value="points.csv" ftype="csv" /> </test> </tests> <help>Calculates the center of mass for all differently colored regions in the image.</help> <citations> <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> </citations> </tool>