annotate galaxy-conf/IntervalAverager.xml @ 6:422ac2bbb274

Uploaded
author timpalpant
date Tue, 14 Feb 2012 18:40:50 -0500
parents 4b32ed5d4a1b
children 81d5b81fb3c2
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
4
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
1 <tool id="IntervalAverager" name="Average intervals" version="1.0.0">
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
2 <description>that have been aligned</description>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
3 <command interpreter="sh">
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
4 galaxyToolRunner.sh visualization.IntervalAverager -i $input -l $loci -o $output
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
5 </command>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
6 <inputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
7 <param format="wig,bigwig" name="input" type="data" label="Sequencing data" />
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
8 <param format="bed" name="loci" type="data" label="List of intervals (with alignment points)" />
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
9 </inputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
10 <outputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
11 <data format="tabular" name="output" />
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
12 </outputs>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
13
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
14 <help>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
15 </help>
4b32ed5d4a1b Uploaded
timpalpant
parents:
diff changeset
16 </tool>