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1 <tool id="NRLCalculator" name="Compute the NRL" version="1.0.0">
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2 <description>from nucleosome calls</description>
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3 <command interpreter="sh">galaxyToolRunner.sh nucleosomes.NRLCalculator -i $input -l $windows -o $output</command>
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4
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4 <inputs>
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5 <param format="tabular" name="input" type="data" label="Nucleosome calls" />
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6 <param format="bed,bedgraph,gff" name="windows" type="data" label="List of intervals/genes" />
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7 </inputs>
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8 <outputs>
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9 <data format="tabular" name="output" />
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10 </outputs>
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11
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12 <help>
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13 .. class:: warningmark
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14
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15 This tool requires a set of nucleosome calls as input.
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16 </help>
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17 </tool>
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