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1 <tool id="Logger" name="Log transform" version="1.0.0">
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2 <description>a (Big)Wig file</description>
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3 <command interpreter="sh">galaxyToolRunner.sh wigmath.LogTransform -i $input -b $base -o $output</command>
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4 <inputs>
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5 <param format="bigwig,wig" name="input" type="data" label="(Big)Wig file" />
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6 <param name="base" type="integer" value="2" label="Logarithm base" />
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7 </inputs>
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8 <outputs>
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9 <data format="wig" name="output" metadata_source="input" />
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10 </outputs>
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11 <tests>
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12 <!--<test>
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13 <param name="input" value="wigmath.input1"/>
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14 <param name="base" value="2"/>
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15 <param name="dbkey" value="sacCer2"/>
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16 <output name="output" file="logger.output1"/>
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17 </test>
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18 <test>
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19 <param name="input" value="wigmath.input1.bw"/>
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20 <param name="base" value="2"/>
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21 <param name="dbkey" value="sacCer2"/>
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22 <output name="output" file="logger.output1"/>
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23 </test>
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24 <test>
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25 <param name="input" value="wigmath.input2"/>
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26 <param name="base" value="2"/>
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27 <param name="dbkey" value="sacCer2"/>
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28 <output name="output" file="logger.output2"/>
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29 </test>
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30 <test>
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31 <param name="input" value="wigmath.input2.bw"/>
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32 <param name="base" value="2"/>
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33 <param name="dbkey" value="sacCer2"/>
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34 <output name="output" file="logger.output2"/>
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35 </test>
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36 <test>
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37 <param name="input" value="wigmath.input3"/>
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38 <param name="base" value="10"/>
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39 <param name="dbkey" value="sacCer2"/>
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40 <output name="output" file="logger.output3"/>
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41 </test>
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42 <test>
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43 <param name="input" value="wigmath.input3.bw"/>
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44 <param name="base" value="10"/>
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45 <param name="dbkey" value="sacCer2"/>
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46 <output name="output" file="logger.output3"/>
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47 </test>-->
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48 </tests>
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49
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50 <help>
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51 </help>
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52 </tool>
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