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comparison galaxy-conf/LogTransform.xml @ 4:4b32ed5d4a1b

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author timpalpant
date Tue, 14 Feb 2012 00:59:33 -0500
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children 81d5b81fb3c2
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3:4b610dc8f6ba 4:4b32ed5d4a1b
1 <tool id="Logger" name="Log transform" version="1.0.0">
2 <description>a (Big)Wig file</description>
3 <command interpreter="sh">galaxyToolRunner.sh wigmath.LogTransform -i $input -b $base -o $output</command>
4 <inputs>
5 <param format="bigwig,wig" name="input" type="data" label="(Big)Wig file" />
6 <param name="base" type="integer" value="2" label="Logarithm base" />
7 </inputs>
8 <outputs>
9 <data format="wig" name="output" metadata_source="input" />
10 </outputs>
11 <tests>
12 <!--<test>
13 <param name="input" value="wigmath.input1"/>
14 <param name="base" value="2"/>
15 <param name="dbkey" value="sacCer2"/>
16 <output name="output" file="logger.output1"/>
17 </test>
18 <test>
19 <param name="input" value="wigmath.input1.bw"/>
20 <param name="base" value="2"/>
21 <param name="dbkey" value="sacCer2"/>
22 <output name="output" file="logger.output1"/>
23 </test>
24 <test>
25 <param name="input" value="wigmath.input2"/>
26 <param name="base" value="2"/>
27 <param name="dbkey" value="sacCer2"/>
28 <output name="output" file="logger.output2"/>
29 </test>
30 <test>
31 <param name="input" value="wigmath.input2.bw"/>
32 <param name="base" value="2"/>
33 <param name="dbkey" value="sacCer2"/>
34 <output name="output" file="logger.output2"/>
35 </test>
36 <test>
37 <param name="input" value="wigmath.input3"/>
38 <param name="base" value="10"/>
39 <param name="dbkey" value="sacCer2"/>
40 <output name="output" file="logger.output3"/>
41 </test>
42 <test>
43 <param name="input" value="wigmath.input3.bw"/>
44 <param name="base" value="10"/>
45 <param name="dbkey" value="sacCer2"/>
46 <output name="output" file="logger.output3"/>
47 </test>-->
48 </tests>
49
50 <help>
51 </help>
52 </tool>