Mercurial > repos > timpalpant > java_genomics_toolkit

comparison galaxy-conf/KMeans.xml @ 25:b43c420a6135 draft default tip

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Incorporate fix: https://github.com/timpalpant/java-genomics-toolkit/commit/9a6c61b7c6b8d85a1cd3f595eed657a537b85dc9
author timpalpant
date Sat, 09 Feb 2019 14:02:24 -0500
parents 9d56b5b85740
children
comparison
equal deleted inserted replaced
24:a77e126ae856 25:b43c420a6135
1 <tool id="KMeans" name="KMeans cluster" version="1.0.0"> 1 <tool id="KMeans" name="KMeans cluster" version="1.0.0">
2 <description>an aligned matrix</description> 2 <description>an aligned matrix</description>
3 <command interpreter="sh">galaxyToolRunner.sh visualization.KMeans -i $input -k $K -1 $min -2 $max -o $output</command> 3 <command interpreter="bash">galaxyToolRunner.sh visualization.KMeans -i $input -k $K -1 $min -2 $max -o $output</command>
4 <inputs> 4 <inputs>
5 <param format="tabular" name="input" type="data" label="Aligned matrix" /> 5 <param format="tabular" name="input" type="data" label="Aligned matrix" />
6 <param name="K" type="integer" value="10" label="Number of clusters" /> 6 <param name="K" type="integer" value="10" label="Number of clusters" />
7 <param name="min" type="integer" value="1" label="Minimum column to use for clustering" /> 7 <param name="min" type="integer" value="1" label="Minimum column to use for clustering" />
8 <param name="max" type="integer" value="-1" label="Maximum column to use for clustering (-1 to end)" /> 8 <param name="max" type="integer" value="-1" label="Maximum column to use for clustering (-1 to end)" />