Mercurial > repos > timpalpant > java_genomics_toolkit

comparison galaxy-conf/galaxyToolRunner.sh @ 2:e16016635b2a

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author timpalpant
date Mon, 13 Feb 2012 22:12:06 -0500
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1:a54db233ee3d 2:e16016635b2a
1 #!/usr/bin/env bash
2
3 if [ $# -eq 0 ]
4 then
5 echo "USAGE: galaxyToolRunner.sh APPNAME [ARGS]";
6 exit;
7 fi
8
9 if [ "$1" = "list" ]
10 then
11 find src/edu/unc/genomics/**/*.java -exec basename -s .java {} \;
12 fi
13
14 java -Dlog4j.configuration=log4j.properties -cp .:../build:../lib/* edu.unc.genomics."$@"