diff java-genomics-toolkit/src/edu/unc/config/GalaxyConfig.java @ 0:1daf3026d231

Upload alpha version
author timpalpant
date Mon, 13 Feb 2012 21:55:55 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/java-genomics-toolkit/src/edu/unc/config/GalaxyConfig.java	Mon Feb 13 21:55:55 2012 -0500
@@ -0,0 +1,42 @@
+package edu.unc.config;
+
+import java.io.IOException;
+import java.nio.file.Path;
+
+import javax.xml.parsers.DocumentBuilder;
+import javax.xml.parsers.DocumentBuilderFactory;
+import javax.xml.parsers.ParserConfigurationException;
+
+import org.w3c.dom.Document;
+import org.xml.sax.SAXException;
+
+public class GalaxyConfig {
+	
+	/**
+	 * Parse a Galaxy configuration file
+	 * @param p
+	 * @return
+	 * @throws ParserConfigurationException 
+	 * @throws IOException 
+	 * @throws SAXException 
+	 */
+	public static GalaxyConfig parse(Path p) throws ParserConfigurationException, SAXException, IOException {
+		DocumentBuilderFactory dbFactory = DocumentBuilderFactory.newInstance();
+		DocumentBuilder dBuilder = dbFactory.newDocumentBuilder();
+		Document doc = dBuilder.parse(p.toFile());
+		return parse(doc);
+	}
+	
+	/**
+	 * Parse a Galaxy configuration XML
+	 * @param doc
+	 * @return
+	 */
+	public static GalaxyConfig parse(Document doc) {
+		GalaxyConfig config = new GalaxyConfig();
+		
+		// TODO Implement parser
+		
+		return config;
+	}
+}