Mercurial > repos > timpalpant > java_genomics_toolkit
diff galaxy-conf/FindAbsoluteMaxima.xml @ 4:4b32ed5d4a1b
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author | timpalpant |
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date | Tue, 14 Feb 2012 00:59:33 -0500 |
parents | |
children | 81d5b81fb3c2 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/galaxy-conf/FindAbsoluteMaxima.xml Tue Feb 14 00:59:33 2012 -0500 @@ -0,0 +1,24 @@ +<tool id="FindWigMaxima" name="Find absolute maxima" version="1.0.0"> + <description>in windows</description> + <command interpreter="sh"> + galaxyToolRunner.sh ngs.FindAbsoluteMaxima -l $window -o $output + #for $input in $inputs + ${input.file} + #end for + </command> + <inputs> + <repeat name="inputs" title="(Big)Wig file"> + <param name="file" type="data" format="bigwig,wig" /> + </repeat> + <param name="window" type="data" format="bed,bedgraph,gff" label="Windows to find maxima in" /> + </inputs> + <outputs> + <data name="output" format="tabular" /> + </outputs> + + <help> + .. class:: warningmark + + This tool requires input data in Wig format. Regions should be specified as Bed, BedGraph, or GFF format + </help> +</tool>