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1 <tool id="FindWigMaxima" name="Find absolute maxima" version="1.0.0">
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2 <description>in windows</description>
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3 <command interpreter="sh">
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4 galaxyToolRunner.sh ngs.FindAbsoluteMaxima -l $window -o $output
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5 #for $input in $inputs
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6 ${input.file}
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7 #end for
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8 </command>
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9 <inputs>
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10 <repeat name="inputs" title="(Big)Wig file">
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11 <param name="file" type="data" format="bigwig,wig" />
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12 </repeat>
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13 <param name="window" type="data" format="bed,bedgraph,gff" label="Windows to find maxima in" />
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14 </inputs>
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15 <outputs>
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16 <data name="output" format="tabular" />
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17 </outputs>
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18
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19 <help>
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20 .. class:: warningmark
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21
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22 This tool requires input data in Wig format. Regions should be specified as Bed, BedGraph, or GFF format
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23 </help>
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24 </tool>
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