Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/IntervalToWig.xml @ 4:4b32ed5d4a1b

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author timpalpant
date Tue, 14 Feb 2012 00:59:33 -0500
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children b1952a90d4bf
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/galaxy-conf/IntervalToWig.xml	Tue Feb 14 00:59:33 2012 -0500
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+<tool id="BedToWig" name="Interval to Wig" version="1.0.0">
+  <description>converter</description>
+  <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input -a ${chromInfo} -o $output</command>
+  <inputs>
+      <param name="input" type="data" format="bed,bedGraph,gff" label="Input Bed/BedGraph/GFF file" />
+  </inputs>
+  <outputs>
+      <data name="output" format="wig" metadata_source="input" />
+  </outputs>
+	
+<help>
+
+.. class:: warningmark
+	
+This tool requires Bed, BedGraph, or GFF formatted data. If you have tabular data that was not correctly autodetected, change the metadata by clicking on the pencil icon for the dataset.
+</help>
+</tool>