view galaxy-conf/IntervalToWig.xml @ 11:b1952a90d4bf

Uploaded
author timpalpant
date Mon, 09 Apr 2012 11:50:23 -0400
parents 4b32ed5d4a1b
children 81d5b81fb3c2
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<tool id="BedToWig" name="Interval to Wig" version="1.0.0">
  <description>converter</description>
  <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command>
  <inputs>
      <param name="input" type="data" format="bed,bedGraph,gff" label="Input Bed/BedGraph/GFF file" />
  	  <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" />
  </inputs>
  <outputs>
      <data name="output" format="wig" metadata_source="input" />
  </outputs>
	
<help>

.. class:: warningmark
	
This tool requires Bed, BedGraph, or GFF formatted data. If you have tabular data that was not correctly autodetected, change the metadata by clicking on the pencil icon for the dataset.
</help>
</tool>