Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/IntervalToWig.xml @ 11:b1952a90d4bf

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author timpalpant
date Mon, 09 Apr 2012 11:50:23 -0400
parents 4b32ed5d4a1b
children 81d5b81fb3c2
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line diff
--- a/galaxy-conf/IntervalToWig.xml	Sat Mar 17 08:11:55 2012 -0400
+++ b/galaxy-conf/IntervalToWig.xml	Mon Apr 09 11:50:23 2012 -0400
@@ -1,8 +1,9 @@
 <tool id="BedToWig" name="Interval to Wig" version="1.0.0">
   <description>converter</description>
-  <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input -a ${chromInfo} -o $output</command>
+  <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command>
   <inputs>
       <param name="input" type="data" format="bed,bedGraph,gff" label="Input Bed/BedGraph/GFF file" />
+  	  <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" />
   </inputs>
   <outputs>
       <data name="output" format="wig" metadata_source="input" />