Mercurial > repos > timpalpant > java_genomics_toolkit

comparison galaxy-conf/IntervalToWig.xml @ 11:b1952a90d4bf

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author timpalpant
date Mon, 09 Apr 2012 11:50:23 -0400
parents 4b32ed5d4a1b
children 81d5b81fb3c2
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10:d063d22f4e80 11:b1952a90d4bf
1 <tool id="BedToWig" name="Interval to Wig" version="1.0.0"> 1 <tool id="BedToWig" name="Interval to Wig" version="1.0.0">
2 <description>converter</description> 2 <description>converter</description>
3 <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input -a ${chromInfo} -o $output</command> 3 <command interpreter="sh">galaxyToolRunner.sh converters.IntervalToWig -i $input $zero -a ${chromInfo} -o $output</command>
4 <inputs> 4 <inputs>
5 <param name="input" type="data" format="bed,bedGraph,gff" label="Input Bed/BedGraph/GFF file" /> 5 <param name="input" type="data" format="bed,bedGraph,gff" label="Input Bed/BedGraph/GFF file" />
6 <param name="zero" type="boolean" checked="false" truevalue="-z" falsevalue="" label="Assume zero where there is no data (default is NaN)" />
6 </inputs> 7 </inputs>
7 <outputs> 8 <outputs>
8 <data name="output" format="wig" metadata_source="input" /> 9 <data name="output" format="wig" metadata_source="input" />
9 </outputs> 10 </outputs>
10 11