Mercurial > repos > timpalpant > java_genomics_toolkit

diff galaxy-conf/Phasogram.xml @ 5:604c98e58034

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author timpalpant
date Tue, 14 Feb 2012 13:04:54 -0500
parents 4b32ed5d4a1b
children 4fc118372ae7
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line diff
--- a/galaxy-conf/Phasogram.xml	Tue Feb 14 00:59:33 2012 -0500
+++ b/galaxy-conf/Phasogram.xml	Tue Feb 14 13:04:54 2012 -0500
@@ -1,6 +1,6 @@
 <tool id="Phasogram" name="Make phasogram" version="1.0.0">
   <description>of dyads</description>
-  <command interpreter="ruby">phasogram.rb -i $input -m $max -o $output</command>
+  <command interpreter="sh">galaxyToolRunner.sh nucleosomes.Phasogram -i $input -m $max -o $output</command>
   <inputs>
     <param name="input" type="data" format="bigwig,wig" label="Dyads BigWig file" />
     <param name="max" type="integer" value="1000" label="Maximum phase shift (bp)" />