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Upload ctat tools.
author trinity_ctat
date Tue, 17 Jul 2018 11:49:16 -0400
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1 <html>
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2 <head>
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3 <script type="text/javascript" charset="utf8" src="search.js"></script>
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4
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5 <!-- DataTables CSS -->
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6 <link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/1.10.9/css/jquery.dataTables.css">
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7 <!-- Bootstrap CSS -->
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8 <link rel="stylesheet" type="text/css" href="https://bootswatch.com/paper/bootstrap.min.css">
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9 <!-- jQuery -->
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10 <script type="text/javascript" charset="utf8" src="https://code.jquery.com/jquery-1.11.3.min.js"></script>
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11
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12 <!-- DataTables -->
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13 <script type="text/javascript" charset="utf8" src="https://cdn.datatables.net/1.10.9/js/jquery.dataTables.min.js"></script>
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14 <style> select { font-size: 90%; width: 30px; } th { font-size: 80%; } td { font-size: 80%; } td.red {color: red;} td.green {color: #009900;} </style>
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15 <script type="text/javascript" class="init">
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16 $(document).ready(function() {
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17 $('#table_id').DataTable();
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18 } );
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19 </script>
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20
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21
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22 </head>
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23 <body>
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24
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25 <nav class="navbar navbar-default">
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26 <div class="container-fluid" style="position: absolute; width: 100%;">
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27 <div class="navbar-header">
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28 <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#bs-example-navbar-collapse-2">
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29 <span class="sr-only">Toggle navigation</span>
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30 <span class="icon-bar"></span>
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31 <span class="icon-bar"></span>
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32 <span class="icon-bar"></span>
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33 </button>
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34 <a class ="navbar-brand" href="#"><p style="font-size:26"><em>slncky</em> Evolution Browser</p></a>
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35 </div>
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36
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37 <div class="collapse navbar-collapse" id="bs-example-navbar-collapse-2">
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38 <ul class="nav navbar-nav">
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39
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40 <a href="#"><li class="active">Browse</a></li>
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41 </ul>
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42 <ul class="nav navbar-nav navbar-right">
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43 </ul>
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44 </div>
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45 </div>
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46 </nav>
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47
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48 <div class="container">
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49 <div class="jumbotron">
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50 <h2>Browse lncRNAs</h2>
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51 <hr>
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52 <br>
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53 <table id="table_id" class="table table-striped table-hover" cellspacing="0" width="100%">
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54 <thead>
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55 <tr>
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56 <th>Lnc</th>
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57 <th>Name</th>
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58 <th>Ortholog</th>
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59 <th>Ortholog Name</th>
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60 <th>Type</th>
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61 <th>Transcript-Transcript Identity</th>
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62 <th>Trascript-Genome Identity</th>
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63 <th>Indel Rate</th>
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64 <th>Conserved Splice Sites</th>
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65 <th>Total Splice Sites</th>
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66 <th>Lnc Exons Aligned</th>
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67 <th>Ortholog Exons Aligned</th>
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68 </tr>
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69 </thead>
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70 <tbody>
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71 <tr><td><a href="lnc/STRG.25.1.html" target="_blank">STRG.25.1</a></td><td>MALAT1</td><td>uc008gfj.2</td><td>Malat1</td><td>intergenic</td><td>0.63</td><td>0.63</td><td>-</td><td>0.0</td><td>0</td><td>1,</td><td>1,</td></tr>
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72 <tr><td><a href="lnc/STRG.5.1.html" target="_blank">STRG.5.1</a></td><td>Unannotated</td><td>uc009vfa.1</td><td>Atpase6</td><td>intergenic</td><td>0.00</td><td>0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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73 <tr><td><a href="lnc/STRG.52.1.html" target="_blank">STRG.52.1</a></td><td>JA760615</td><td>uc012hdm.1</td><td>BC071253</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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74 <tr><td><a href="lnc/STRG.48.2.html" target="_blank">STRG.48.2</a></td><td>OK/SW-cl.16</td><td>uc009vez.1</td><td>Cox2</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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75 <tr><td><a href="lnc/STRG.44.1.html" target="_blank">STRG.44.1</a></td><td>TVAS5</td><td>uc009vew.1</td><td>AK018753</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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76 <tr><td><a href="lnc/STRG.49.1.html" target="_blank">STRG.49.1</a></td><td>OK/SW-cl.16</td><td>uc009vfa.1</td><td>Atpase6</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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77 <tr><td><a href="lnc/STRG.45.1.html" target="_blank">STRG.45.1</a></td><td>TVAS5</td><td>uc009vew.1</td><td>AK018753</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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78 <tr><td><a href="lnc/STRG.51.1.html" target="_blank">STRG.51.1</a></td><td>MTND5</td><td>uc009vfc.1</td><td>Cytb</td><td>intergenic</td><td>0.00</td><td>-0.00</td><td>-</td><td>0.0</td><td>0</td><td>NA</td><td>NA</td></tr>
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79 </tbody>
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80 </table>
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81 </div>
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82 </body>
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83 </html>