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annotate alignment/alignment.tool_conf @ 0:5b9a38ec4a39 draft default tip

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First commit of old repositories
author osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
date Tue, 11 Mar 2014 12:19:13 -0700
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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1 <<<<<<< /home/galaxy/galaxy-dist/tools/osiris/alignment/alignment.tool_conf
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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2 <section name="Osiris:Alignment" id="alignment">
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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3 =======
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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4 <section name="Osiris: Alignment" id="alignment">
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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5 >>>>>>> /tmp/alignment.tool_conf~other.3Q5xSY
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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6 <label text="Alignment" id="phyloalign" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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7 <tool file="osiris/alignment/phytab_muscle.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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8 <tool file="osiris/alignment/phytab_aliscorecut.xml"/>
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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9 <tool file="osiris/alignment/phytab_mafft.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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10 <tool file="osiris/alignment/phytab_mview.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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11 <tool file="osiris/alignment/phytab_prank.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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12 <tool file="osiris/alignment/mview.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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13 <tool file="osiris/alignment/gblocks.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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14 <tool file="osiris/alignment/phytab_ssr.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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15 <tool file="osiris/alignment/gap-rem.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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16 <label text="Concatenation" id="concat" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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17 <tool file="osiris/alignment/fasconcat.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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18 <tool file="osiris/alignment/phylocatenator.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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19 <tool file="osiris/alignment/fasta_concatenate_by_species.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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20 <label text="ModelTest" id="modeltest" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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21 <tool file="osiris/alignment/jmodeltest.xml"/>
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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22 <tool file="osiris/alignment/prottest.xml" />
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osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
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23 </section>
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