--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/phyloconversion/length_outliers.xml	Tue Mar 11 12:19:13 2014 -0700
@@ -0,0 +1,49 @@
+<tool id="length_outliers" name="length_outliers" version="1.0">
+    <description>Identifies sequences shorter than average in FASTA file</description>
+    <command interpreter="perl">
+		length_outliers.pl $infile $outfile1 $outfile2 $percent 
+    </command>
+    <inputs>
+	    <param name="infile" type="data" format="fasta" label="Input File" help="FASTA file to convert" />
+	    <param name="percent" type="integer" value = "50" label="Percent" help="Sequences less than this percent of average are deleted" />
+    </inputs>
+    <outputs>
+	<data format="fasta" name="outfile1" label="Passed sequences${tool.name} on ${on_string}: Out file" />
+	<data format="fasta" name="outfile2" label="Short sequences ${tool.name} on ${on_string}: Out file" />
+    </outputs>
+    <help>
+**What it does**
+
+Deletes sequences from a fasta file that are shorter than a specified percentage of the average of all sequences.
+
+------
+
+**Inputs**
+
+FASTA
+
+------
+
+**Outputs**
+
+2 FASTA files: one with sequences that are long enough, the other with sequences that are too short.
+
+------
+
+**Additional Information**
+
+Please direct questions or comments to ucsb_phylogenetics@lifesci.ucsb.edu or, if you can, enter them on the 
+osiris_phylogenetics site at bitbucket.org
+
+------
+
+**Citations**
+
+This tool is part of the Osiris Phylogenetics Tool Package for Galaxy. If you make extensive use 
+of this tool in a publication, please consider citing the following.
+
+Current Osiris Citation is here
+
+http://osiris-phylogenetics.blogspot.com/2012/10/citation.html
+    </help>
+</tool>