Mercurial > repos > ucsb-phylogenetics > osiris_phylogenetics
diff orthologs/ucsb_hamster/lib/wisecfg/gon120.bla @ 0:5b9a38ec4a39 draft default tip
First commit of old repositories
| author | osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> |
|---|---|
| date | Tue, 11 Mar 2014 12:19:13 -0700 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/orthologs/ucsb_hamster/lib/wisecfg/gon120.bla Tue Mar 11 12:19:13 2014 -0700 @@ -0,0 +1,30 @@ +# benner-gonnet matrix 2/95 +# pam := 120 +# print (DayhoffM (NewLogPAM1, pam)); +# DayMatrix(Peptide, pam=120, Simil: max=16.556, min=-9.624, max offdiag=5.460, +# del=-22.183-1.396*(k-1)) + A R N D C Q E G H I L K M F P S T W Y V B Z X * + 5.9 -2.3 -2.0 -1.8 -0.1 -1.2 -0.9 -0.3 -2.6 -2.7 -3.0 -1.9 -1.7 -4.8 -0.6 1.6 0.2 -6.8 -4.8 0.0 0.0 0.0 0.0 -9.6 + -2.3 8.3 -1.0 -2.7 -4.5 1.6 -1.0 -3.0 -0.1 -5.3 -4.4 3.6 -3.8 -6.8 -3.0 -1.5 -1.6 -3.0 -3.7 -4.4 0.0 0.0 0.0 -9.6 + -2.0 -1.0 8.0 2.6 -4.1 0.1 -0.1 -0.7 1.4 -5.5 -6.1 0.5 -4.6 -5.8 -3.2 1.0 0.0 -6.8 -2.8 -5.0 0.0 0.0 0.0 -9.6 + -1.8 -2.7 2.6 8.2 -6.9 0.1 3.5 -1.4 -0.7 -8.0 -8.2 -0.8 -6.4 -8.7 -2.8 -0.5 -1.3 -9.6 -5.3 -6.5 0.0 0.0 0.0 -9.6 + -0.1 -4.5 -4.1 -6.9 14.4 -5.6 -6.8 -4.5 -3.1 -3.6 -3.9 -6.4 -2.6 -2.6 -6.8 -0.7 -2.1 -2.9 -2.0 -1.1 0.0 0.0 0.0 -9.6 + -1.2 1.6 0.1 0.1 -5.6 7.4 2.5 -3.0 1.7 -4.3 -3.0 2.0 -1.4 -5.3 -1.4 -0.7 -0.9 -4.9 -3.8 -3.6 0.0 0.0 0.0 -9.6 + -0.9 -1.0 -0.1 3.5 -6.8 2.5 7.2 -3.1 -0.6 -5.5 -5.7 1.1 -4.0 -7.8 -2.2 -0.9 -1.5 -7.8 -5.6 -3.8 0.0 0.0 0.0 -9.6 + -0.3 -3.0 -0.7 -1.4 -4.5 -3.0 -3.1 9.0 -3.7 -8.7 -8.2 -3.4 -6.5 -9.2 -4.1 -0.6 -3.5 -6.6 -7.4 -6.5 0.0 0.0 0.0 -9.6 + -2.6 -0.1 1.4 -0.7 -3.1 1.7 -0.6 -3.7 11.0 -4.8 -4.2 -0.2 -2.8 -1.4 -3.1 -1.4 -1.4 -2.8 2.6 -4.7 0.0 0.0 0.0 -9.6 + -2.7 -5.3 -5.5 -8.0 -3.6 -4.3 -5.5 -8.7 -4.8 7.2 2.8 -4.4 2.9 -0.3 -5.6 -4.4 -1.7 -4.6 -3.1 4.2 0.0 0.0 0.0 -9.6 + -3.0 -4.4 -6.1 -8.2 -3.9 -3.0 -5.7 -8.2 -4.2 2.8 6.6 -4.4 3.4 1.5 -4.4 -4.7 -3.4 -2.9 -2.0 1.3 0.0 0.0 0.0 -9.6 + -1.9 3.6 0.5 -0.8 -6.4 2.0 1.1 -3.4 -0.2 -4.4 -4.4 6.9 -2.7 -6.7 -2.4 -1.0 -0.6 -6.8 -4.4 -3.9 0.0 0.0 0.0 -9.6 + -1.7 -3.8 -4.6 -6.4 -2.6 -1.4 -4.0 -6.5 -2.8 2.9 3.4 -2.7 9.5 1.1 -5.6 -2.9 -1.6 -3.1 -2.2 1.0 0.0 0.0 0.0 -9.6 + -4.8 -6.8 -5.8 -8.7 -2.6 -5.3 -7.8 -9.2 -1.4 -0.3 1.5 -6.7 1.1 10.2 -7.2 -5.8 -4.7 2.7 5.5 -1.7 0.0 0.0 0.0 -9.6 + -0.6 -3.0 -3.2 -2.8 -6.8 -1.4 -2.2 -4.1 -3.1 -5.6 -4.4 -2.4 -5.6 -7.2 10.5 -0.5 -1.0 -8.9 -5.9 -4.2 0.0 0.0 0.0 -9.6 + 1.6 -1.5 1.0 -0.5 -0.7 -0.7 -0.9 -0.6 -1.4 -4.4 -4.7 -1.0 -2.9 -5.8 -0.5 6.0 2.6 -5.7 -3.5 -2.8 0.0 0.0 0.0 -9.6 + 0.2 -1.6 0.0 -1.3 -2.1 -0.9 -1.5 -3.5 -1.4 -1.7 -3.4 -0.6 -1.6 -4.7 -1.0 2.6 6.4 -6.7 -4.2 -0.3 0.0 0.0 0.0 -9.6 + -6.8 -3.0 -6.8 -9.6 -2.9 -4.9 -7.8 -6.6 -2.8 -4.6 -2.9 -6.8 -3.1 2.7 -8.9 -5.7 -6.7 16.6 3.3 -5.9 0.0 0.0 0.0 -9.6 + -4.8 -3.7 -2.8 -5.3 -2.0 -3.8 -5.6 -7.4 2.6 -3.1 -2.0 -4.4 -2.2 5.5 -5.9 -3.5 -4.2 3.3 11.1 -3.3 0.0 0.0 0.0 -9.6 + 0.0 -4.4 -5.0 -6.5 -1.1 -3.6 -3.8 -6.5 -4.7 4.2 1.3 -3.9 1.0 -1.7 -4.2 -2.8 -0.3 -5.9 -3.3 6.5 0.0 0.0 0.0 -9.6 + 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -9.6 + 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -9.6 + 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -9.6 + -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 -9.6 1