Mercurial > repos > ucsb-phylogenetics > ucsb_phylogenetics

diff phylomatic/phylomatic.pl @ 2:4de3f9572615 draft

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author ucsb-phylogenetics
date Thu, 21 Jun 2012 17:46:55 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/phylomatic/phylomatic.pl	Thu Jun 21 17:46:55 2012 -0400
@@ -0,0 +1,10 @@
+#!/usr/bin/perl
+
+#wrapper written by Roger Ngo and Todd H Oakley, UCSB
+
+my $file1 = $ARGV[0];
+my $file2 = $ARGV[1];
+
+my $run = qx/phylomatic -f $file1 -t $file2 > output.txt 2> errors.txt /;
+
+print $run;