Mercurial > repos > ufz > iphop_build_database

diff data_manager/iphop_datamanager.xml @ 2:d636e6221f8e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_iphop commit c78bd5eafa3d9450305cc8b32ba9cf8c64c42ba7
author ufz
date Mon, 18 Nov 2024 15:26:14 +0000
parents 26f850e35fa0
children 39dc692a9554
line wrap: on
line diff
--- a/data_manager/iphop_datamanager.xml	Tue Nov 12 08:27:27 2024 +0000
+++ b/data_manager/iphop_datamanager.xml	Mon Nov 18 15:26:14 2024 +0000
@@ -2,16 +2,16 @@
     <description>database builder</description>
     <macros>
         <token name="@TOOL_VERSION@">1.3.3</token>
-        <token name="@VERSION_SUFFIX@">1</token>
+        <token name="@VERSION_SUFFIX@">2</token>
         <token name="@PROFILE@">22.01</token>
     </macros>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">iphop</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        mkdir db &&
+        mkdir -p '$out_file.extra_files_path'/db &&
         iphop download
-            --db_dir db/
+            --db_dir '$out_file.extra_files_path'/db
             --db_version $db_version
             ## --full_verify  https://bitbucket.org/srouxjgi/iphop/issues/114/db-download-verification-error
             --no_prompt &&