annotate WebServiceExtensionsV1.1/WebServiceToolWorkflow_REST_SOAP/workflowclients/client_57.xml~ @ 0:049760c677de default tip

Galaxy WSExtensions added successfully
author uga-galaxy-group
date Tue, 05 Jul 2011 19:34:18 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
1 <tool id="client_57" name="fetchBatch">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
2 <description> Client for operation : fetchBatch , Web service : WSDbfetchDoclit.WSDBFetchDoclitServerService_services </description>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
3 <command interpreter="python">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
4 client_1.py
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
5 #if $cond_source.optional_param_source=="no":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
6 $output
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
7 $servicetype
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
8 $url
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
9 $method
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
10 WSDbfetchDoclit.WSDBFetchDoclitServerService_services fetchBatch
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
11 "_format"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
12 #if $source0.source0_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
13 $source0.user_param0
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
14 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
15 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
16 $source0.cached_param0
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
17 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
18 "_db"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
19 #if $source1.source1_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
20 $source1.user_param1
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
21 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
22 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
23 $source1.cached_param1
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
24 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
25 "_style"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
26 #if $source2.source2_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
27 $source2.user_param2
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
28 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
29 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
30 $source2.cached_param2
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
31 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
32 "_ids"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
33 #if $source3.source3_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
34 $source3.user_param3
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
35 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
36 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
37 $source3.cached_param3
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
38 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
39 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
40 $output
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
41 $servicetype
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
42 $url
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
43 $method
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
44 WSDbfetchDoclit.WSDBFetchDoclitServerService_services fetchBatch
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
45 "_format"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
46 #if $source0.source0_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
47 $source0.user_param0
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
48 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
49 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
50 $source0.cached_param0
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
51 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
52 "_db"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
53 #if $source1.source1_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
54 $source1.user_param1
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
55 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
56 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
57 $source1.cached_param1
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
58 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
59 "_style"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
60 #if $source2.source2_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
61 $source2.user_param2
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
62 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
63 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
64 $source2.cached_param2
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
65 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
66 "_ids"
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
67 #if $source3.source3_source=="user":
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
68 $source3.user_param3
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
69 #else:
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
70 fileInput
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
71 $source3.cached_param3
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
72 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
73 #end if
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
74 </command>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
75 <inputs>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
76 <param name="servicetype" type="hidden" value="SOAP" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
77 <param name="url" type="hidden" value="http://www.ebi.ac.uk/ws/services/WSDbfetchDoclit?wsdl" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
78 <param name="method" type="hidden" value="fetchBatch" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
79 <conditional name="source0">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
80 <param name="source0_source" type="select" label="format Source">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
81 <option value="cached" selected="true">Param value will be taken from previous step</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
82 <option value="user">User will enter the param value</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
83 </param>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
84 <when value="user">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
85 <param format="text" size = "150" name = "user_param0" type="text" label="Enter format" help="see tip below" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
86 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
87 <when value="cached">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
88 <param name = "cached_param0" type="data" label="Choose the step from which to get the parameter format"/>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
89 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
90 </conditional><conditional name="source1">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
91 <param name="source1_source" type="select" label="db Source">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
92 <option value="cached" selected="true">Param value will be taken from previous step</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
93 <option value="user">User will enter the param value</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
94 </param>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
95 <when value="user">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
96 <param format="text" size = "150" name = "user_param1" type="text" label="Enter db" help="see tip below" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
97 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
98 <when value="cached">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
99 <param name = "cached_param1" type="data" label="Choose the step from which to get the parameter db"/>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
100 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
101 </conditional><conditional name="source2">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
102 <param name="source2_source" type="select" label="style Source">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
103 <option value="cached" selected="true">Param value will be taken from previous step</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
104 <option value="user">User will enter the param value</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
105 </param>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
106 <when value="user">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
107 <param format="text" size = "150" name = "user_param2" type="text" label="Enter style" help="see tip below" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
108 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
109 <when value="cached">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
110 <param name = "cached_param2" type="data" label="Choose the step from which to get the parameter style"/>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
111 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
112 </conditional><conditional name="source3">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
113 <param name="source3_source" type="select" label="ids Source">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
114 <option value="cached" selected="true">Param value will be taken from previous step</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
115 <option value="user">User will enter the param value</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
116 </param>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
117 <when value="user">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
118 <param format="text" size = "150" name = "user_param3" type="text" label="Enter ids" help="see tip below" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
119 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
120 <when value="cached">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
121 <param name = "cached_param3" type="data" label="Choose the step from which to get the parameter ids"/>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
122 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
123 </conditional> <conditional name="cond_source">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
124 <param name="optional_param_source" type="select" label="Display Additional Parameters">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
125 <option value="no" selected="true">no</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
126 <option value="yes">yes</option>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
127 </param>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
128 <when value="no">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
129 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
130 <when value="yes">
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
131 </when>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
132 </conditional>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
133 </inputs>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
134 <outputs>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
135 <data format="tabular" name="output" />
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
136 </outputs>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
137 <help>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
138
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
139 .. class:: infomark
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
140
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
141 **TIP:** About format: type is String
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
142
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
143 .. class:: infomark
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
144
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
145 **TIP:** About db: type is String
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
146
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
147 .. class:: infomark
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
148
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
149 **TIP:** About style: type is String
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
150
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
151 .. class:: infomark
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
152
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
153 **TIP:** About ids: type is String
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
154 </help>
049760c677de Galaxy WSExtensions added successfully
uga-galaxy-group
parents:
diff changeset
155 </tool>