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1 <tool id="alchemy2matrix" name="Alchemy to Matrix">
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2 <description>file converter</description>
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3 <command interpreter="perl">alchemy2matrix.pl $input $output</command>
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4 <inputs>
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5 <param format="tabular" name="input" type="data" label="Source file"/>
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6 </inputs>
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7 <outputs>
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8 <data format="tabular" name="output" />
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9 </outputs>
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10
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11 <tests>
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12 <test>
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13 <param name="input" value="raw_data.txt"/>
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14 <output name="out_file1" file="output.txt"/>
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15 </test>
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16 </tests>
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17
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18 <help>
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19 This tool converts an alchemy-output file format to a SNP matrix format.
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20 </help>
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21
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22 </tool> |