Mercurial > repos > venice-juanillas > convert_format
comparison file_conversion/alchemy2matrix.xml @ 0:f3222062f9ca draft
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| author | venice-juanillas |
|---|---|
| date | Mon, 05 Nov 2012 23:01:18 -0500 |
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| -1:000000000000 | 0:f3222062f9ca |
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| 1 <tool id="alchemy2matrix" name="Alchemy to Matrix"> | |
| 2 <description>file converter</description> | |
| 3 <command interpreter="perl">alchemy2matrix.pl $input $output</command> | |
| 4 <inputs> | |
| 5 <param format="tabular" name="input" type="data" label="Source file"/> | |
| 6 </inputs> | |
| 7 <outputs> | |
| 8 <data format="tabular" name="output" /> | |
| 9 </outputs> | |
| 10 | |
| 11 <tests> | |
| 12 <test> | |
| 13 <param name="input" value="raw_data.txt"/> | |
| 14 <output name="out_file1" file="output.txt"/> | |
| 15 </test> | |
| 16 </tests> | |
| 17 | |
| 18 <help> | |
| 19 This tool converts an alchemy-output file format to a SNP matrix format. | |
| 20 </help> | |
| 21 | |
| 22 </tool> |