Mercurial > repos > vimalkumarvelayudhan > riboplot
comparison README.rst @ 33:42fe64cac818
Add bedtools as a dependency for riboplot
| author | Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com> |
|---|---|
| date | Fri, 30 Oct 2015 12:14:40 +0000 |
| parents | fc2094c0f355 |
| children | de451be99b93 |
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| 32:fc2094c0f355 | 33:42fe64cac818 |
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| 19 Repository: https://github.com/vimalkvn/riboplot | 19 Repository: https://github.com/vimalkvn/riboplot |
| 20 | 20 |
| 21 | 21 |
| 22 .. note:: | 22 .. note:: |
| 23 | 23 |
| 24 1. RNA coverage plot requires `bedtools <https://github.com/arq5x/bedtools2>`_ to be installed. | 24 Matplotlib installation requires freetype headers and libraries installed |
| 25 (``libfreetype6-dev`` on Ubuntu 14.04). | |
| 25 | 26 |
| 26 This release of riboplot has been tested with bedtools version ``2.17.0``. | |
| 27 | |
| 28 On Ubuntu and derivatives, bedtools can be installed from the repositories using:: | |
| 29 | |
| 30 sudo apt-get install bedtools | |
| 31 | |
| 32 2. Matplotlib installation requires freetype headers and libraries installed | |
| 33 (``libfreetype6-dev`` on Ubuntu 14.04). |