Mercurial > repos > vipints > fml_wig2bed
diff Wig_to_bedGraph/README @ 0:45f3fa82369f default tip
Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author | vipints |
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date | Tue, 07 Jun 2011 18:08:31 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Wig_to_bedGraph/README Tue Jun 07 18:08:31 2011 -0400 @@ -0,0 +1,41 @@ +INTRODUCTION + +A tool for converting data in wiggle fixedStep or variableStep format to four column bedGraph format + +CONTENTS + +galaxy: Contains tool configuration file in *.xml format. + + Wig2bedGraph.xml + +t: Test data set. (move to your galaxy root folder/test-data/) + + You may need to move the test files into your test-data directory so galaxy can find them. + If you want to run the functional tests eg as: + + sh run_functional_tests.sh -id fml_wig2bed + +script: Perl based script. + + wig2bedGraph_converter.pl: Read data in wiggle fixedStep and variableStep and convert to bedGraph format. + +REQUIREMENTS + + Perl + +COMMENTS/QUESTIONS + +I can be reached at vipin.ts@tuebingen.mpg.de + +LICENSE + +Copyright (C) 2010 Friedrich Miescher Laboratory of the Max Planck Society + +This program is free software; you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation; either version 3 of the License, or +(at your option) any later version. + +COURTESY + +Galaxy Team.