Mercurial > repos > vipints > fml_wig2bed

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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author vipints
date Tue, 07 Jun 2011 18:08:31 -0400
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INTRODUCTION

A tool for converting data in wiggle fixedStep or variableStep format to four column bedGraph format 

CONTENTS

galaxy: Contains tool configuration file in *.xml format. 

    Wig2bedGraph.xml

t: Test data set. (move to your galaxy root folder/test-data/)
    
    You may need to move the test files into your test-data directory so galaxy can find them. 
    If you want to run the functional tests eg as: 

    sh run_functional_tests.sh -id fml_wig2bed 

script: Perl based script.

    wig2bedGraph_converter.pl: Read data in wiggle fixedStep and variableStep and convert to bedGraph format.
    
REQUIREMENTS

    Perl

COMMENTS/QUESTIONS 

I can be reached at vipin.ts@tuebingen.mpg.de

LICENSE

Copyright (C) 2010 Friedrich Miescher Laboratory of the Max Planck Society

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 3 of the License, or
(at your option) any later version.

COURTESY

Galaxy Team.