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1 <tool id="snpeff_genomes" name="List Installed SnpEff Genomes">
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2 <description>Checks the local SnpEff installation to compile a list of currently installed genomes</description>
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1
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3 <requirements>
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4 <requirement type="package">mimodd</requirement>
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5 </requirements>
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6 <version_command>mimodd version -q</version_command>
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7 <command>
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8 mimodd snpeff-genomes -o "$outputfile"
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9 </command>
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10 <outputs>
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11 <data name="outputfile" format="tabular" />
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12 </outputs>
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13 <help>
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14 .. class:: infomark
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15
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16 **What it does**
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17
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18 When executed this tool searches the host machine's SnpEff installation for properly registered and installed
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19 genome annotation files. The resulting list is added as a plain text file to your history for use with the *Variant Annotation* Tool.
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20
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21 </help>
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22
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23 </tool>
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