Mercurial > repos > wolma > mimodd

diff bamsort.xml @ 2:72d20758ba2c

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final upload
author wolma
date Wed, 11 Feb 2015 09:23:43 -0500
parents a548b3c6ed00
children bdd1995c9e66
line wrap: on
line diff
--- a/bamsort.xml	Wed Feb 11 08:57:11 2015 -0500
+++ b/bamsort.xml	Wed Feb 11 09:23:43 2015 -0500
@@ -1,8 +1,9 @@
 <tool id="bamsort" name="Sort BAM file">
   <description>Sort a BAM file by coordinates (or names) of the mapped reads</description>
-  <requirements>
-    <requirement type="package">mimodd</requirement>
-  </requirements>
+  <macros>
+    <import>toolshed_macros.xml</import>
+  </macros>
+  <expand macro="requirements"/>
   <version_command>mimodd version -q</version_command>
   <command>
 	mimodd sort "$inputfile" -o "$output" --oformat $oformat $by_name