Mercurial > repos > workflow4metabolomics > influx_si
comparison test-data/e_coli_i.log @ 0:9b03a930b08b draft
"planemo upload commit 8e69ff6919990050909511d8bdfb520c19a4af72"
| author | workflow4metabolomics |
|---|---|
| date | Mon, 04 May 2020 03:24:12 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:9b03a930b08b |
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| 1 "/usr/local/miniconda3/bin/influx_i" "e_coli_i.ftbl" | |
| 2 code gen: 2020-03-25 15:40:11 | |
| 3 executing: "/usr/local/miniconda3/bin/python3.7" "/home/STORAGE/local/miniconda3/bin/ftbl2optR.py" "--tblimit" "0" "--ropts" "noscale=TRUE; clowp=1e-09; zc=0.0; time_order='2'; TIMEIT=TRUE" "--case_i" "e_coli_i.ftbl" | |
| 4 executing: R --vanilla --slave < e_coli_i.R | |
| 5 calcul : 2020-03-25 15:40:14 | |
| 6 load : 2020-03-25 15:40:18.59 cpu=1.02 | |
| 7 rinit : 2020-03-25 15:40:18.61 cpu=1.031 | |
| 8 r_flux : 2020-03-25 15:40:18.61 cpu=1.031 | |
| 9 Afl qr(): 2020-03-25 15:40:18.68 cpu=1.101 | |
| 10 dfl_dffg: 2020-03-25 15:40:18.91 cpu=1.139 | |
| 11 spAbr : 2020-03-25 15:40:18.91 cpu=1.143 | |
| 12 weight 1: 2020-03-25 15:40:18.91 cpu=1.143 | |
| 13 weight 2: 2020-03-25 15:40:18.95 cpu=1.225 | |
| 14 weight 3: 2020-03-25 15:40:19.02 cpu=1.348 | |
| 15 weight 4: 2020-03-25 15:40:19.07 cpu=1.456 | |
| 16 weight 5: 2020-03-25 15:40:19.10 cpu=1.506 | |
| 17 weight 6: 2020-03-25 15:40:19.17 cpu=1.574 | |
| 18 measure : 2020-03-25 15:40:19.25 cpu=1.602 | |
| 19 ineq : 2020-03-25 15:40:19.33 cpu=1.683 | |
| 20 preopt : 2020-03-25 15:40:19.57 cpu=2.056 | |
| 21 labargs : 2020-03-25 15:40:19.58 cpu=2.069 | |
| 22 cl expor: 2020-03-25 15:40:20.32 cpu=2.089 | |
| 23 cl sourc: 2020-03-25 15:40:21.20 cpu=2.204 | |
| 24 run 1: 2020-03-25 15:40:24.75 cpu=5.386 | |
| 25 Starting point | |
| 26 zc ineq : 2020-03-25 15:40:24.75 cpu=5.387 | |
| 27 kvh init: 2020-03-25 15:40:24.78 cpu=5.432 | |
| 28 check ja: 2020-03-25 15:40:25.27 cpu=5.625 | |
| 29 optim : 2020-03-25 15:40:26.47 cpu=5.632 | |
| 30 it=0 res=237.7947 | |
| 31 it=1 res=70.06248 normstep=30.47659 btk=1 | |
| 32 it=2 res=36.43491 normstep=31.35182 btk=1 | |
| 33 it=3 res=21.83319 normstep=0.2793447 btk=1 | |
| 34 it=4 res=21.7384 normstep=0.03332941 btk=1 | |
| 35 it=5 res=21.72383 normstep=0.03867587 btk=1 | |
| 36 it=6 res=21.6348 normstep=0.08885869 btk=1 | |
| 37 it=7 res=21.37745 normstep=0.4890457 btk=0.5 | |
| 38 it=8 res=21.24931 normstep=0.6490092 btk=1 | |
| 39 it=9 res=20.96647 normstep=0.3171006 btk=1 | |
| 40 it=10 res=20.96366 normstep=0.1287473 btk=1 | |
| 41 it=15 res=20.96358 normstep=5.449035e-05 btk=1 | |
| 42 secondzc: 2020-03-25 15:40:41.08 cpu=8.101 | |
| 43 After the first optimization, no zero crossing inequality was activated. So no reoptimization | |
| 44 postopt : 2020-03-25 15:40:41.09 cpu=8.111 | |
| 45 linstats: 2020-03-25 15:40:41.87 cpu=8.697 | |
| 46 rend : 2020-03-25 15:40:42.16 cpu=9.089 | |
| 47 end : 2020-03-25 15:40:43 |