Mercurial > repos > workflow4metabolomics > influx_si_data_manager
view test-data/galaxy_test.netw @ 1:c722e4bdeb37 draft default tip
planemo upload for repository https://github.com/MetaboHUB-MetaToul-FluxoMet/tools_w4m/tree/main/tools/influx_data_manager commit 9cc60c73fa373f5231828d346558d2e7a6ef7934
author | workflow4metabolomics |
---|---|
date | Wed, 10 Apr 2024 07:09:58 +0000 |
parents | 6daf2eaa1509 |
children |
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# Created by 'ftbl2mtf e_coli.ftbl -o mtf/' at 2022-05-25 17:04:34 CEST +0200 Glucupt_1: Gluc_1 (ABCDEF) -> Glc6P (ABCDEF) Glucupt_U: Gluc_U (ABCDEF) -> Glc6P (ABCDEF) pgi: Glc6P (ABCDEF) <-> Fru6P (ABCDEF) pfk: Fru6P (ABCDEF) -> FruBP (ABCDEF) ald: FruBP (ABCDEF) <-> GA3P (CBA) + GA3P (DEF) pgk: GA3P (ABC) <-> PGA (ABC) eno: PGA (ABC) <-> PEP (ABC) pyk: PEP (ABC) <-> Pyr (ABC) zwf: Glc6P (ABCDEF) -> Gnt6P (ABCDEF) gnd: Gnt6P (ABCDEF) -> CO2 (A) + Rib5P (BCDEF) edd: Gnt6P (ABCDEF) -> Pyr (ABC) + GA3P (DEF) ta: GA3P (ABC) + Sed7P (abcdefg) <-> Ery4P (defg) + Fru6P (abcABC) tk1: Rib5P (ABCDE) + Rib5P (abcde) <-> GA3P (CDE) + Sed7P (ABabcde) tk2: Rib5P (ABCDE) + Ery4P (abcd) <-> GA3P (CDE) + Fru6P (ABabcd) pdh: Pyr (ABC) <-> AcCoA (BC) + CO2 (A) citsynth: AcCoA (AB) + OAA (abcd) -> ICit (dcbaBA) idh: ICit (ABCDEF) -> AKG (ABCEF) + CO2 (D) akgdh: AKG (ABCDE) -> Suc (BCDE) + CO2 (A) fum_a: Suc (ABCD) <-> Mal (ABCD) fum_b: Suc (ABCD) <-> Mal (DCBA) maldh: Mal (ABCD) <-> OAA (ABCD) ppc: PEP (ABC) + CO2 (a) <-> OAA (ABCa) mae: Mal (ABCD) -> Pyr (ABC) + CO2 (D) bs_glc6P: Glc6P (ABCDEF) -> BM_Glc6P (ABCDEF) bs_fru6P: Fru6P (ABCDEF) -> BM_Fru6P (ABCDEF) bs_pga: PGA (ABC) -> BM_PGA (ABC) bs_pga_aux: BM_PGA (ABC) -> PGA_Aux (ABC) bs_pga1: BM_PGA (ABC) -> Ser (ABC) bs_pga1_aux: Ser (ABC) -> Ser_Aux (ABC) bs_pga2: Ser (ABC) -> Cys (ABC) bs_pga2_aux: Cys (ABC) -> Cys_Aux (ABC) bs_pga3: Ser (ABC) <-> Gly (AB) + FTHF (C) bs_pga3_aux: Gly (AB) -> Gly_Aux (AB) bs_DHAP: GA3P (ABC) -> Glp (ABC) bs_pyr: Pyr (ABC) -> BM_Pyr (ABC) bs_pyr1: BM_Pyr (ABC) -> Ala (ABC) bs_pyr1_aux: Ala (ABC) -> Ala_Aux (ABC) bs_pyr2: BM_Pyr (ABC) + BM_Pyr (abc) -> AKV (ABbcC) + CO2 (a) bs_pyr4: AKV (ABCDE) -> Val (ABCDE) bs_pyr4_aux: Val (ABCDE) -> Val_Aux (ABCDE) bs_pyr3: AKV (ABCDE) + BM_AcCoA (ab) -> Leu (abBCDE) + CO2 (A) bs_pyr3_aux: Leu (ABCDEF) -> Leu_Aux (ABCDEF) bs_e4p: Ery4P (ABCD) -> BM_Ery4P (ABCD) bs_rib5p: Rib5P (ABCDE) -> BM_Rib5P (ABCDE) bs_rib5p1: BM_Rib5P (ABCDE) + FTHF (a) -> His (EDCBAa) bs_rib5p1_aux: His (ABCDEF) -> His_Aux (ABCDEF) bs_rib5p2: BM_Rib5P (ABCDE) -> Ri5P_Aux (ABCDE) bs_pep: PEP (ABC) -> BM_PEP (ABC) bs_pep1: BM_PEP (ABC) + BM_Ery4P (abcd) -> DAHP (ABCabcd) bs_pep2: BM_PEP (ABC) + DAHP (abcdefg) -> Chor (ABCabcdefg) bs_pep3a: Chor (ABCDEFGHIJ) -> Phe (ABCEFGHIJ) + CO2 (D) bs_pep3b: Chor (ABCDEFGHIJ) -> Phe (ABCEJIHGF) + CO2 (D) bs_pep3_aux: Phe (ABCEFGHIJ) -> Phe_Aux (ABCEFGHIJ) bs_pep4a: Chor (ABCDEFGHIJ) -> Tyr (ABCEFGHIJ) + CO2 (D) bs_pep4b: Chor (ABCDEFGHIJ) -> Tyr (ABCEJIHGF) + CO2 (D) bs_pep4_aux: Tyr (ABCEFGHIJ) -> Tyr_Aux (ABCEFGHIJ) bs_pep5: BM_PEP (ABC) -> PEP_Aux (ABC) bs_pep6: Chor (ABCDEFGHIJ) + BM_Rib5P (abcde) -> Trp (edcbaJEFGHI) + PyrCO2 (ABCD) bs_pep6_aux: Trp (ABCDEFGHIJK) -> Trp_Aux (ABCDEFGHIJK) bs_pep7: PyrCO2 (ABCD) -> Pyr (ABC) + CO2 (D) bs_accoa: AcCoA (AB) -> BM_AcCoA (AB) bs_accoa_aux: BM_AcCoA (AB) -> AcCoA_Aux (AB) bs_akg: AKG (ABCDE) -> BM_AKG (ABCDE) bs_akg1: BM_AKG (ABCDE) -> Glu (ABCDE) bs_akg2: Glu (ABCDE) -> Pro (ABCDE) bs_akg3: Glu (ABCDE) -> Gln (ABCDE) bs_akg4: Glu (ABCDE) + CO2 (a) -> Arg (ABCDEa) bs_akg4_aux: Arg (ABCDEF) -> Arg_Aux (ABCDEF) bs_oaa: OAA (ABCD) -> BM_OAA (ABCD) bs_oaa1: BM_OAA (ABCD) -> Asp (ABCD) bs_oaa1_aux: Asp (ABCD) -> Asp_Aux (ABCD) bs_oaa2: Thr (ABCD) + BM_Pyr (abc) -> Ile (ABbCDc) + CO2 (a) bs_oaa2_aux: Ile (ABCDEF) -> Ile_Aux (ABCDEF) bs_oaa3a: BM_OAA (ABCD) + BM_Pyr (abc) -> Lys (ABCDcb) + CO2 (a) bs_oaa3b: BM_OAA (ABCD) + BM_Pyr (abc) -> Lys (abcDCB) + CO2 (A) bs_oaa3_aux: Lys (ABCDEF) -> Lys_Aux (ABCDEF) bs_oaa4: BM_OAA (ABCD) -> OAA_Aux (ABCD) bs_oaa5: BM_OAA (ABCD) -> Thr (ABCD) bs_oaa5_aux: Thr (ABCD) -> Thr_Aux (ABCD) bs_oaa6: BM_OAA (ABCD) + FTHF (a) -> Met (ABCDa) bs_oaa6_aux: Met (ABCDE) -> Met_Aux (ABCDE) bs_oaa7: BM_OAA (ABCD) -> Asn (ABCD) bs_oaa7_aux: Asn (ABCD) -> Asn_Aux (ABCD) out_co2: CO2 (A) -> CO2_out (A) out_Ac: AcCoA (AB) -> Acetate (AB) out_FTHF: FTHF (A) -> FTHF_out (A)