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annotate fastx_toolkit-0.0.6/src/seqalign_test/seqalign_test.cpp @ 3:997f5136985f draft default tip

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author xilinxu
date Thu, 14 Aug 2014 04:52:17 -0400
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1 #include <string>
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2 #include <vector>
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3 #include <ostream>
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4 #include <iostream>
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5 #include "sequence_alignment.h"
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8 int main( /*int argc, char* argv[] */)
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9 {
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10 HalfLocalSequenceAlignment lsa ;
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12 const SequenceAlignmentResults& results = lsa.align("AAAGGTTTCCC","AGGCTT" );
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13 lsa.print_matrix();
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14 results.print();
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17 return 0;
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18 }