Mercurial > repos > xuebing > sharplab_seq_motif
view mytools/memelogo.xml @ 12:7b8a5b55ee15
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author | xuebing |
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date | Fri, 16 Mar 2012 16:11:05 -0400 |
parents | 39217fa39ff2 |
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<tool id="memelogo" name="motif logo"> <description>of MEME motif</description> <command>ceqlogo -i $input -o tmp.eps -t $title -x '' && ps2pdf -dEPSCrop tmp.eps $output </command> <inputs> <param name="input" type="data" format="txt" label="MEME motif file"/> <param name="title" type='text' size="50" label="Title" value="motif1"/> </inputs> <outputs> <data format="pdf" name="output" /> </outputs> <help> **Description** Generate sequence logo for MEME motif file. See details here: http://meme.sdsc.edu/meme/doc/ceqlogo.html **Example output** .. image:: ./static/images/memelogo.png </help> </tool>